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STL6-S73_scaffold_1_prodigal-single.1__X__X__00100
Bact-VirSTL6-S73_scaffold_1_prodigal-single.1__X__X__00100
Identity
- Kingdom:
- phage
Quality
63.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 53-116
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.71 | 48.0 | 3.75e-01 | 95.3% | 34.6% |
| 1u5kA03 | 6.20.220.20 | Special › Other non-globular › Erythroid Transcription Factor GATA-1; Chain A › Recombination protein O, zinc-binding domain | 0.63 | 32.0 | 4.18e-01 | 89.1% | 91.4% |
| 3lrqB00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 42.0 | 3.97e-01 | 90.6% | 62.5% |
| 2rfpA00 | 1.10.3420.10 | Mainly Alpha › Orthogonal Bundle › putative ntp pyrophosphohydrolase like fold › putative ntp pyrophosphohydrolase like domain | 0.57 | 32.0 | 2.34e-01 | 70.3% | 20.1% |
| 1z6uA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 43.0 | 3.64e-01 | 96.9% | 47.8% |
| 5fb0C01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 40.0 | 4.10e-01 | 76.6% | 98.4% |
ECOD (9)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3863643 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.70 | 51.0 | 4.19e-01 | 78.1% | 55.7% |
| 3243430 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.64 | 48.0 | 4.22e-01 | 90.6% | 54.7% |
| 3871607 | 3782.1.1.1 ↗ | a+b duplicates or obligate multimers › Envelope glycoprotein GP2-related › Envelope glycoprotein GP2-related › Envelope glycoprotein GP2-related › TLV_coat | 0.59 | 46.0 | 3.90e-01 | 85.9% | 50.0% |
| 3476174 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.59 | 42.0 | 3.80e-01 | 92.2% | 53.3% |
| 3671724 | 376.1.1.22 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4_3 | 0.59 | 39.0 | 4.06e-01 | 85.9% | 75.0% |
| 4315178 | 109.4.1.101 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › CENP-I | 0.58 | 51.0 | 2.94e-01 | 100.0% | 45.5% |
| 3896422 | 216.1.1.25 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › PF31022 | 0.53 | 44.0 | 3.24e-01 | 96.9% | 75.8% |
| 4210423 | 313.1.1.1 ↗ | a+b complex topology › Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain › Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain › Uridine diphospho-N-Acetylenolpyruvylglucosamine reductase, MurB, C-terminal domain › MurB_C | 0.51 | 39.0 | 3.11e-01 | 90.6% | 78.8% |
| 3987104 | 221.4.1.27 ↗ | a+b two layers › beta-Grasp › Nudix › Nudix › Zn_ribbon_NUD | 0.51 | 40.0 | 3.31e-01 | 85.9% | 82.6% |