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STL6-S73_scaffold_1_prodigal-single.1__X__X__00107
Bact-VirSTL6-S73_scaffold_1_prodigal-single.1__X__X__00107
Identity
- Kingdom:
- phage
Quality
87.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-92
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qo8A01 | 1.10.287.40 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain | 0.70 | 38.0 | 3.55e-01 | 100.0% | 44.3% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.63 | 57.0 | 5.44e-01 | 100.0% | 95.1% |
| 5x56B00 | 1.20.58.810 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 | 0.63 | 49.0 | 4.60e-01 | 87.4% | 68.6% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.61 | 54.0 | 4.92e-01 | 100.0% | 90.0% |
| 1lqsL01 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.61 | 49.0 | 4.75e-01 | 100.0% | 76.0% |
| 2lseA00 | 1.20.120.1360 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.61 | 53.0 | 5.02e-01 | 100.0% | 82.2% |
| 4hr1A00 | 1.20.1270.410 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.59 | 43.0 | 3.93e-01 | 78.2% | 100.0% |
| 4nuuB02 | 1.20.58.830 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 47.0 | 4.18e-01 | 86.2% | 88.6% |
| 1g2rA00 | 3.30.1230.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like | 0.58 | 40.0 | 3.95e-01 | 71.3% | 92.6% |
| 1hy0A01 | 1.10.275.10 | Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain) | 0.58 | 46.0 | 4.03e-01 | 88.5% | 97.1% |
| 2ra1A01 | 1.20.58.790 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 45.0 | 4.38e-01 | 85.1% | 89.8% |
| 1exzB00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.56 | 48.0 | 4.09e-01 | 100.0% | 57.9% |
| 3onkA00 | 1.25.40.90 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.56 | 44.0 | 3.84e-01 | 90.8% | 54.7% |
| 3d85C00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.56 | 50.0 | 4.30e-01 | 97.7% | 67.7% |
| 1u3dA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.55 | 45.0 | 3.92e-01 | 92.0% | 58.2% |
| 3caxA01 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.55 | 43.0 | 3.25e-01 | 85.1% | 43.3% |
| 6xz3A01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.55 | 43.0 | 3.92e-01 | 85.1% | 70.1% |
| 6v9zA02 | 1.20.1560.10 | Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain | 0.54 | 44.0 | 3.07e-01 | 92.0% | 84.3% |
| 1yy7A02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.54 | 43.0 | 4.04e-01 | 88.5% | 70.5% |
| 4j05A00 | 1.20.1250.20 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains | 0.54 | 47.0 | 3.01e-01 | 95.4% | 46.4% |
| 4l8iB00 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.54 | 45.0 | 4.12e-01 | 89.7% | 82.1% |
| 1lvfB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 41.0 | 3.92e-01 | 83.9% | 92.3% |
| 4bthA00 | 1.10.439.10 | Mainly Alpha › Orthogonal Bundle › Penicillin Amidohydrolase; domain 1 › Penicillin Amidohydrolase, domain 1 | 0.54 | 39.0 | 3.24e-01 | 78.2% | 56.1% |
| 3u3iA02 | 1.20.58.1110 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.53 | 45.0 | 4.25e-01 | 95.4% | 81.5% |
| 2jlnA00 | 1.10.4160.10 | Mainly Alpha › Orthogonal Bundle › Hydantoin permease › Hydantoin permease | 0.53 | 40.0 | 2.58e-01 | 82.8% | 92.0% |
| 1irlA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.52 | 45.0 | 3.98e-01 | 100.0% | 63.9% |
| 3r2qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 41.0 | 3.76e-01 | 86.2% | 69.9% |
ECOD (20)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3578346 | 2492.1.1.4 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.70 | 50.0 | 3.47e-01 | 74.7% | 89.3% |
| 3990125 | 622.4.1.0 ↗ | alpha bundles › YvfG-like › Mite allergen Der p 5-related › Mite allergen Der p 5-related | 0.62 | 48.0 | 4.53e-01 | 82.8% | 94.3% |
| 3723020 | 109.4.1.356 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Fungal_trans | 0.61 | 54.0 | 3.53e-01 | 97.7% | 39.2% |
| 3622615 | 604.1.1.172 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › 7TM_GPCR_Srx | 0.61 | 49.0 | 4.65e-01 | 86.2% | 82.9% |
| 4586838 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.60 | 42.0 | 3.49e-01 | 72.4% | 41.3% |
| 4838827 | 150.3.1.29 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › IL23 | 0.60 | 55.0 | 4.70e-01 | 100.0% | 69.6% |
| 3484774 | 622.1.1.1 ↗ | alpha bundles › YvfG-like › HSC20 (HSCB), C-terminal oligomerisation domain › HSC20 (HSCB), C-terminal oligomerisation domain › HSCB_C | 0.60 | 48.0 | 4.54e-01 | 86.2% | 83.8% |
| 3843421 | 604.6.1.54 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain › PF26206 | 0.60 | 47.0 | 4.57e-01 | 85.1% | 94.0% |
| 4127245 | 152.1.2.1 ↗ | alpha arrays › RPB6/omega subunit-like › RPB6/omega subunit-like › RNA polymerase omega subunit › RNA_pol_Rpb6 | 0.58 | 35.0 | 3.91e-01 | 88.5% | 78.5% |
| 5006970 | 4323.1.1.0 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C | 0.58 | 39.0 | 3.37e-01 | 70.1% | 45.7% |
| 4258578 | 604.14.1.1 ↗ | alpha bundles › Spectrin repeat-like › PPK N-terminal domain-like › PPK N-terminal domain-like › PP_kinase_N | 0.56 | 48.0 | 4.54e-01 | 95.4% | 79.0% |
| 4936327 | 7516.1.1.79 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glyco_trans_2_3 | 0.56 | 49.0 | 3.33e-01 | 100.0% | 48.7% |
| 4967434 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.55 | 39.0 | 3.86e-01 | 72.4% | 100.0% |
| 3586228 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.55 | 43.0 | 4.13e-01 | 85.1% | 89.0% |
| 4955523 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.54 | 38.0 | 3.52e-01 | 98.9% | 56.5% |
| 3630205 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.53 | 43.0 | 3.88e-01 | 88.5% | 84.2% |
| 3920438 | 150.3.1.4 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › 4-helical cytokines › 4-helical cytokine › IFN-gamma | 0.53 | 45.0 | 3.83e-01 | 98.9% | 60.0% |
| 3240454 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.53 | 42.0 | 4.06e-01 | 88.5% | 88.0% |
| 3192094 | 5001.1.1.87 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › EXS | 0.51 | 39.0 | 2.62e-01 | 83.9% | 33.6% |
| 1107945 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.50 | 37.0 | 4.01e-01 | 77.0% | 94.5% |