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STL6-S73_scaffold_1_prodigal-single.1__X__X__00125

Bact-Vir

STL6-S73_scaffold_1_prodigal-single.1__X__X__00125

Identity

Kingdom:
phage

Quality

81.1 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 73-127
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14311.13 best DUF4379 25.9 1.30e-05 85.5% 75.0%
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3puaA01 2.60.120.650 Mainly Beta › Sandwich › Jelly Rolls › Cupin 0.73 50.0 3.13e-01 96.4% 14.0%
2wj9B00 3.30.70.3580 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Antirestriction protein 0.67 56.0 4.17e-01 96.4% 57.9%
4bwxA03 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 50.0 4.48e-01 90.9% 80.0%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.61 47.0 4.66e-01 87.3% 78.9%
1g5hB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.60 53.0 4.26e-01 100.0% 71.0%
2p04A00 3.30.450.260 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Haem NO binding associated domain 0.59 47.0 3.91e-01 92.7% 74.8%
1atiB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.59 50.0 4.07e-01 100.0% 73.2%
4xr7F02 1.10.287.3700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.58 47.0 4.03e-01 89.1% 70.0%
5e3iA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.57 43.0 3.75e-01 90.9% 96.0%
6nhiA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.56 45.0 3.99e-01 90.9% 81.0%
4xcmA02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.56 42.0 3.27e-01 81.8% 69.1%
1b7tA02 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.56 46.0 4.79e-01 90.9% 96.2%
4csqA00 2.30.29.190 Mainly Beta › Roll › PH-domain like › 0.56 46.0 3.75e-01 98.2% 78.8%
1nj1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.56 47.0 3.89e-01 98.2% 70.2%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.56 45.0 3.95e-01 87.3% 70.9%
2i4lB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.55 46.0 3.88e-01 98.2% 71.3%
3wt0A02 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.55 44.0 3.30e-01 94.5% 40.0%
2d9tA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.55 45.0 4.80e-01 89.1% 100.0%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 47.0 4.27e-01 98.2% 100.0%
4wi1A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.55 46.0 3.63e-01 98.2% 60.2%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.55 42.0 4.52e-01 85.5% 97.8%
1qe0A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.55 44.0 3.85e-01 94.5% 81.3%
1adjB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.54 46.0 3.93e-01 100.0% 76.6%
2wfbA00 3.30.420.130 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain 0.54 41.0 3.34e-01 89.1% 70.8%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.54 39.0 3.88e-01 100.0% 78.9%
3netB02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.54 46.0 3.86e-01 100.0% 77.6%
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.53 42.0 4.24e-01 89.1% 87.0%
4c0dB00 2.30.30.1020 Mainly Beta › Roll › SH3 type barrels. › CCR4-NOT complex subunit 2/3/5, C-terminal domain 0.53 40.0 2.82e-01 83.6% 24.1%
1httA02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.53 44.0 3.76e-01 100.0% 76.5%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.52 43.0 3.76e-01 96.4% 77.2%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 43.0 3.97e-01 98.2% 71.2%
7wa9A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.51 40.0 3.23e-01 100.0% 63.8%
3kxtA00 2.30.30.610 Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 0.51 40.0 4.03e-01 85.5% 91.1%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 40.0 3.93e-01 87.3% 91.9%
1td6A02 3.30.1790.10 Alpha Beta › 2-Layer Sandwich › hypothetical protein mp506/mpn330, domain 2 › hypothetical protein mp506/mpn330, domain 2 0.51 43.0 3.69e-01 96.4% 94.6%
2rajA02 3.30.1520.10 Alpha Beta › 2-Layer Sandwich › PX Domain › Phox-like domain 0.51 37.0 2.95e-01 83.6% 35.7%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.51 43.0 3.96e-01 98.2% 72.6%
1lckA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.50 42.0 4.18e-01 94.5% 96.6%
ECOD (37)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3598807 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.91 84.0 7.71e-01 98.2% 82.6%
3605531 375.1.1.77 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4379 0.89 84.0 7.08e-01 100.0% 70.2%
3592370 150.5.1.0 alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like 0.89 83.0 6.23e-01 100.0% 47.5%
3712524 375.1.1.77 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF4379 0.88 66.0 6.64e-01 78.2% 83.6%
3764092 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.72 50.0 3.10e-01 96.4% 14.0%
3620947 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.67 49.0 4.93e-01 87.3% 78.2%
4562754 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.62 53.0 4.45e-01 100.0% 81.0%
499 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.62 45.0 4.08e-01 81.8% 84.3%
4778018 1016.1.1.1 alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Pan3_PK 0.61 49.0 4.35e-01 89.1% 76.8%
3514631 1016.1.1.1 alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Pan3_PK 0.61 51.0 4.04e-01 98.2% 80.6%
3739884 1016.1.1.1 alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Pan3_PK 0.61 52.0 4.05e-01 100.0% 74.4%
2321219 1016.1.1.1 alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Pan3_PK 0.60 52.0 3.94e-01 98.2% 62.7%
4979113 620.1.1.6 alpha bundles › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › YfiT-like putative metal-dependent hydrolases › DinB_2 0.60 50.0 3.68e-01 94.5% 81.0%
4163844 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.60 51.0 4.36e-01 100.0% 77.9%
2321841 1016.1.1.1 alpha arrays › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Dimerization domain in caprin-1 and PAN3 › Pan3_PK 0.59 50.0 3.80e-01 98.2% 66.9%
3566431 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.58 45.0 4.42e-01 96.4% 81.7%
4370920 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.58 50.0 4.15e-01 100.0% 72.0%
4931821 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.57 49.0 4.09e-01 100.0% 69.9%
4969220 4013.1.1.1 a/b three-layered sandwiches › a/b domain in QueA-like proteins (Pfam 02547) › a/b domain in QueA-like proteins (Pfam 02547) › a/b domain in QueA-like proteins (Pfam 02547) › Queuosine_synth 0.57 38.0 2.50e-01 70.9% 16.2%
4297095 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.57 48.0 4.01e-01 100.0% 69.5%
4056471 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.57 48.0 4.36e-01 100.0% 72.5%
3268771 214.1.1.1 a+b two layers › SH2 › SH2 › SH2 › SH2 0.57 45.0 3.66e-01 94.5% 90.0%
3680858 192.2.1.0 alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.56 45.0 3.28e-01 90.9% 48.5%
4940298 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.56 47.0 4.10e-01 98.2% 80.0%
2623930 4001.1.1.4 a+b duplicates or obligate multimers › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › a+b domain in cullin-like proteins › Cullin_AB 0.56 43.0 3.52e-01 85.5% 78.4%
4054592 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.56 43.0 3.71e-01 90.9% 89.0%
4223628 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.56 48.0 4.05e-01 100.0% 76.8%
4474374 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.56 47.0 4.03e-01 100.0% 75.8%
3518287 4.1.1.347 beta barrels › SH3 › SH3 › SH3 › KOW7_SPT5, KOW6_SPT5 0.55 48.0 3.83e-01 98.2% 55.7%
4928458 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.55 46.0 4.04e-01 100.0% 81.1%
4327535 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.55 46.0 4.19e-01 100.0% 71.2%
3816842 109.4.1.498 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DUF4487 0.55 48.0 2.70e-01 100.0% 11.1%
4176748 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.55 45.0 3.59e-01 98.2% 59.2%
4420173 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.53 47.0 4.23e-01 98.2% 72.0%
4015071 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 43.0 4.02e-01 100.0% 72.9%
3403311 4326.1.1.1 a+b two layers › ERH-like › ERH-like › ERH-like › ER 0.52 39.0 3.35e-01 87.3% 93.0%
5016957 101.1.8.1 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase 0.52 39.0 2.89e-01 89.1% 82.9%
D2 high residues 147-211
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF14311.13 best DUF4379 27.9 3.00e-06 89.2% 94.6%
D3 high residues 228-268
PDB
Domain cluster: representative
CATH (76)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3oymA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.79 69.0 5.80e-01 100.0% 71.4%
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 67.0 6.22e-01 100.0% 92.5%
1khiA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.78 65.0 5.34e-01 92.7% 91.7%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.75 66.0 6.30e-01 100.0% 89.6%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 61.0 5.56e-01 97.6% 91.5%
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.74 64.0 5.47e-01 100.0% 67.6%
2rqtA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 62.0 5.52e-01 100.0% 91.8%
2heqA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 63.0 5.80e-01 100.0% 96.3%
4krtB03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 60.0 5.22e-01 97.6% 95.5%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.73 63.0 5.37e-01 100.0% 62.3%
2dk3A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 61.0 4.92e-01 100.0% 65.1%
2eyzA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 55.0 4.25e-01 82.9% 53.8%
4dq2A03 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 62.0 5.96e-01 100.0% 85.1%
4dapA01 2.40.50.580 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 58.0 4.75e-01 92.7% 80.0%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 56.0 4.68e-01 87.8% 60.3%
3bdlA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.72 60.0 3.94e-01 92.7% 63.3%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 58.0 5.36e-01 97.6% 93.1%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.72 55.0 4.39e-01 92.7% 64.6%
2ldmA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.71 61.0 5.71e-01 100.0% 83.0%
3d0fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.70 55.0 4.65e-01 90.2% 95.9%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 58.0 5.30e-01 100.0% 96.6%
4wh5A00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.70 49.0 3.34e-01 87.8% 19.6%
2wg5F02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 56.0 5.02e-01 92.7% 93.1%
4oonA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.69 59.0 4.44e-01 100.0% 94.2%
1s1nA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.68 55.0 5.03e-01 97.6% 88.3%
4gp3A03 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.68 51.0 3.81e-01 90.2% 62.3%
5d9hA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 51.0 4.12e-01 92.7% 88.6%
5ygqA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.65 51.0 3.30e-01 95.1% 48.9%
5ajiB02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.64 54.0 5.14e-01 100.0% 80.0%
3ebrA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.64 51.0 3.57e-01 97.6% 77.6%
2auwA01 3.30.2020.10 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › NE0471-like N-terminal domain 0.64 49.0 4.06e-01 90.2% 85.4%
8c0zE01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 52.0 3.77e-01 100.0% 93.1%
1aogA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 53.0 3.86e-01 100.0% 95.0%
1onfA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.63 50.0 3.77e-01 100.0% 94.9%
4fk1A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 50.0 3.31e-01 95.1% 54.0%
1eigA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.62 49.0 4.22e-01 95.1% 57.5%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.62 47.0 4.20e-01 90.2% 90.8%
4bjzA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.62 49.0 3.38e-01 97.6% 69.6%
2a6hC05 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.61 49.0 4.14e-01 92.7% 90.7%
5twbA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 49.0 3.16e-01 95.1% 48.0%
2v3aA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 51.0 3.65e-01 100.0% 88.9%
3luuA00 3.30.2020.30 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › 0.61 51.0 4.09e-01 100.0% 85.4%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.61 46.0 3.58e-01 90.2% 60.0%
3o0hB02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.61 49.0 3.69e-01 100.0% 94.9%
3a0oA03 2.70.98.70 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.60 45.0 2.73e-01 82.9% 36.3%
5ttjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 48.0 3.08e-01 97.6% 58.8%
6b4oA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 48.0 3.64e-01 100.0% 94.9%
2ra2B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.60 49.0 4.51e-01 100.0% 75.9%
3nlcA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 47.0 3.01e-01 95.1% 65.8%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.60 47.0 3.23e-01 95.1% 39.9%
3fg2P02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 49.0 3.59e-01 100.0% 96.8%
3i6dA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.59 48.0 3.28e-01 95.1% 45.9%
2x8nA01 3.30.2020.40 Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 0.59 45.0 3.56e-01 90.2% 75.3%
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 46.0 4.07e-01 92.7% 64.2%
3kkjA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 44.0 3.18e-01 92.7% 76.5%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.58 47.0 3.20e-01 92.7% 55.8%
4fk1A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.58 47.0 3.60e-01 100.0% 98.2%
5xpyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 45.0 3.47e-01 92.7% 59.3%
4flnA02 3.20.190.20 Alpha Beta › Alpha-Beta Barrel › N-terminal domain of MutM-like DNA repair proteins › 0.57 47.0 3.31e-01 100.0% 55.3%
1gv4A02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 46.0 3.21e-01 100.0% 77.7%
2f4iA02 2.40.50.420 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Envelope glycoprotein gp160, DUF2291, alpha/beta domain 0.57 42.0 3.25e-01 90.2% 95.7%
3lltA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 43.0 3.57e-01 95.1% 83.9%
6cmzA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.57 49.0 3.55e-01 97.6% 71.4%
2b3yA05 3.20.19.10 Alpha Beta › Alpha-Beta Barrel › Aconitase; domain 4 › Aconitase, domain 4 0.57 42.0 2.74e-01 90.2% 86.4%
3pvlA04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 42.0 3.44e-01 92.7% 60.6%
6e20A00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.56 45.0 3.30e-01 100.0% 79.5%
3zxfA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.55 45.0 3.26e-01 100.0% 77.0%
7chiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 42.0 2.71e-01 92.7% 56.5%
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 40.0 3.42e-01 100.0% 70.5%
2f4qA01 3.30.66.10 Alpha Beta › 2-Layer Sandwich › Viral Topoisomerase I › DNA topoisomerase I domain 0.53 38.0 3.32e-01 90.2% 47.2%
4ym3C00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.52 42.0 3.06e-01 100.0% 74.3%
6rjiA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 41.0 3.90e-01 90.2% 96.2%
3e82E02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.52 40.0 2.66e-01 90.2% 72.0%
2wmmA02 3.30.70.3500 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MukB, hinge domain 0.50 39.0 3.09e-01 100.0% 65.5%
1ye8A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.50 41.0 2.82e-01 100.0% 55.0%
2jh1A01 3.90.640.70 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.50 33.0 2.63e-01 70.7% 74.1%
ECOD (91)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3245032 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.85 76.0 6.14e-01 100.0% 86.7%
3502418 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.84 64.0 6.77e-01 87.8% 97.1%
3824513 4.1.1.302 beta barrels › SH3 › SH3 › SH3 › tSH3-B_UBE2O 0.83 74.0 4.54e-01 100.0% 97.8%
3774821 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 73.0 6.44e-01 100.0% 83.3%
3486495 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 72.0 4.64e-01 97.6% 27.4%
3555931 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.82 73.0 5.23e-01 100.0% 43.5%
4014906 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.82 70.0 5.58e-01 95.1% 52.5%
3885050 4.1.1.360 beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.82 72.0 4.68e-01 100.0% 28.6%
4002679 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.81 72.0 5.10e-01 100.0% 50.0%
4581600 2.1.1.70 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.81 66.0 4.40e-01 90.2% 38.0%
3275832 4.1.1.104 beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.80 70.0 6.39e-01 100.0% 90.9%
3222147 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 70.0 6.23e-01 100.0% 83.3%
3372822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.80 70.0 5.74e-01 100.0% 72.0%
3504513 2.1.1.70 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.80 65.0 4.66e-01 90.2% 48.7%
3623890 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.80 70.0 5.54e-01 100.0% 58.8%
3503771 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 69.0 5.99e-01 100.0% 84.6%
3200493 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.80 69.0 6.29e-01 97.6% 78.2%
3602009 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.80 64.0 4.48e-01 90.2% 43.8%
3907870 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.80 68.0 5.48e-01 97.6% 67.1%
3660755 4.8.1.21 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › PTM_DIR17_Tudor 0.79 69.0 5.67e-01 100.0% 61.3%
3256431 4.1.1.360 beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.79 68.0 5.47e-01 97.6% 53.8%
3603885 2.1.1.70 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.79 63.0 4.25e-01 90.2% 38.0%
4994758 2.1.1.70 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.78 66.0 4.73e-01 92.7% 50.0%
3514453 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 66.0 5.46e-01 97.6% 70.7%
3695780 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.78 65.0 5.29e-01 97.6% 67.5%
3498145 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 64.0 5.65e-01 97.6% 82.8%
4134876 4.1.1.334 beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 0.77 64.0 4.31e-01 97.6% 32.1%
3873942 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.77 68.0 5.83e-01 100.0% 86.2%
3619599 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.77 67.0 5.50e-01 100.0% 90.7%
3491137 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 66.0 5.81e-01 97.6% 88.3%
3702915 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 65.0 5.77e-01 97.6% 88.3%
3533318 4.1.1.33 beta barrels › SH3 › SH3 › SH3 › Myosin_N 0.77 67.0 6.34e-01 100.0% 88.0%
3336204 2.1.1.70 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Prot_ATP_ID_OB_C 0.77 61.0 4.37e-01 90.2% 46.7%
3597376 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.76 61.0 4.50e-01 90.2% 51.8%
3554995 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 64.0 5.43e-01 97.6% 75.7%
4082863 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 63.0 5.39e-01 97.6% 77.1%
3614414 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 65.0 5.86e-01 100.0% 72.4%
3810217 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 65.0 6.17e-01 100.0% 88.0%
3626531 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 64.0 5.02e-01 97.6% 58.9%
3930461 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.76 62.0 5.24e-01 97.6% 72.0%
3487936 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 64.0 5.40e-01 97.6% 75.7%
3476188 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 63.0 5.28e-01 100.0% 73.3%
4537356 4.1.1.58 beta barrels › SH3 › SH3 › SH3 › SH3_3 0.75 62.0 5.55e-01 95.1% 96.7%
3496355 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.75 63.0 5.73e-01 95.1% 94.5%
3898370 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 62.0 5.64e-01 97.6% 94.8%
3924338 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 64.0 5.42e-01 100.0% 92.9%
3842441 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.75 62.0 5.58e-01 97.6% 90.0%
3526953 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 62.0 5.45e-01 97.6% 87.3%
3521739 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.75 63.0 5.01e-01 97.6% 62.4%
3494671 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 57.0 5.57e-01 90.2% 80.0%
3899589 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 60.0 5.42e-01 97.6% 91.7%
3549597 4.1.1.77 beta barrels › SH3 › SH3 › SH3 › VGCC_beta4Aa_N 0.72 59.0 4.29e-01 100.0% 64.6%
3995675 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.72 58.0 5.28e-01 97.6% 91.7%
3323984 4.1.1.38 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L2_C 0.72 60.0 3.96e-01 100.0% 28.1%
4927618 2.1.1.11 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › eIF-1a 0.72 59.0 4.55e-01 95.1% 68.4%
5049906 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.71 56.0 5.00e-01 92.7% 61.7%
5022448 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 59.0 4.98e-01 100.0% 80.0%
3972407 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.71 56.0 3.70e-01 90.2% 94.3%
4213616 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.70 61.0 4.64e-01 100.0% 89.5%
4378659 2.1.1.60 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RsgI_N 0.70 55.0 5.38e-01 87.8% 93.3%
3263031 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 56.0 5.02e-01 100.0% 63.1%
3489317 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 51.0 5.02e-01 85.4% 82.2%
3585016 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.69 55.0 4.96e-01 92.7% 86.7%
3496961 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 51.0 4.51e-01 85.4% 56.9%
162525 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.68 53.0 4.22e-01 100.0% 52.9%
3441677 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 56.0 5.32e-01 100.0% 96.0%
3839910 2.1.1.7 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › S1 0.65 52.0 4.59e-01 90.2% 100.0%
5065184 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 50.0 4.93e-01 90.2% 84.4%
3283135 2003.1.2.8 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_2,Pyr_redox_2 0.62 50.0 3.23e-01 95.1% 47.6%
4043931 2.1.1.9 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S4e 0.62 47.0 4.27e-01 87.8% 60.0%
3209226 2003.1.2.17 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Amino_oxidase 0.62 49.0 2.94e-01 95.1% 67.9%
4188685 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.61 49.0 3.01e-01 95.1% 61.1%
3190184 192.15.1.0 alpha bundles › Long alpha-hairpin › Endosomal sorting complex assembly domains › Endosomal sorting complex assembly domains 0.61 46.0 3.71e-01 92.7% 60.0%
4344305 2003.1.2.13 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.61 48.0 2.91e-01 95.1% 38.6%
3252596 719.2.1.1 beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.60 49.0 3.63e-01 100.0% 79.2%
3659657 5.1.4.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 47.0 2.62e-01 92.7% 8.9%
5059099 241.2.1.0 a+b two layers › Type III secretory system chaperone-like › Frataxin-like › Frataxin-like 0.60 50.0 4.06e-01 100.0% 55.7%
5017734 304.48.1.0 a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.60 46.0 2.67e-01 90.2% 16.0%
3606563 719.2.1.1 beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.60 49.0 3.62e-01 100.0% 70.0%
3938425 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.60 48.0 3.81e-01 95.1% 80.0%
2538947 309.1.1.4 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C 0.60 47.0 2.90e-01 87.8% 84.7%
3477236 5.1.11.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed 0.60 45.0 2.43e-01 85.4% 12.1%
3404768 2003.1.2.18 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.59 47.0 2.80e-01 97.6% 95.9%
3646092 719.2.1.1 beta barrels › XRCC4, N-terminal domain-like › NE0471 N-terminal domain-like › NE0471 N-terminal domain-like › GBBH-like_N 0.59 46.0 3.42e-01 100.0% 74.1%
4185319 2004.1.1.73 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 0.57 43.0 2.88e-01 92.7% 21.5%
4886914 4998.1.1.1 beta sandwiches › Flagellar hook protein flgE D2 domain-like › Flagellar hook protein flgE D2 domain › Flagellar hook protein flgE D2 domain › FlgE_D2 0.57 40.0 2.82e-01 75.6% 21.0%
3501909 325.1.7.0 a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif 0.57 45.0 3.27e-01 92.7% 49.2%
3800251 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 42.0 3.65e-01 92.7% 76.0%
3186682 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.56 43.0 2.98e-01 87.8% 52.9%
5010111 12.1.1.0 beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.54 40.0 3.09e-01 95.1% 85.6%
3804264 64.1.1.8 beta meanders › WW domain-like › WW domain › WW domain › DUF7028 0.53 42.0 3.42e-01 92.7% 88.2%