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STL6-S73_scaffold_1_prodigal-single.1__X__X__00136

Bact-Vir

STL6-S73_scaffold_1_prodigal-single.1__X__X__00136

Identity

Kingdom:
phage

Quality

90.9 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-79
PDB
CATH (55)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5xbfA03 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.74 61.0 5.90e-01 100.0% 79.5%
2vldB01 2.70.180.20 Mainly Beta › Distorted Sandwich › Protein Yojf; Chain: A; › 0.73 66.0 5.69e-01 100.0% 65.3%
3c4sA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 47.0 5.24e-01 100.0% 96.5%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.68 54.0 5.49e-01 100.0% 88.2%
2do3A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.67 42.0 4.88e-01 98.7% 98.0%
1q67A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.66 58.0 4.84e-01 100.0% 76.4%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.65 41.0 4.27e-01 100.0% 68.5%
1hczA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.65 40.0 4.44e-01 84.6% 81.4%
8ainB01 3.10.450.250 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › S. aureus uracil DNA glycosylase inhibitor 0.65 47.0 4.31e-01 89.7% 58.1%
4ytlA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.64 41.0 4.74e-01 100.0% 100.0%
2e6zA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.63 41.0 4.50e-01 100.0% 86.4%
5j3tA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.63 55.0 4.76e-01 100.0% 65.1%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 44.0 4.39e-01 97.4% 72.2%
1vq8Q00 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.63 47.0 4.42e-01 100.0% 65.3%
1t6lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.62 46.0 3.22e-01 78.2% 92.0%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.62 43.0 4.60e-01 100.0% 86.6%
1o8vA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 54.0 4.60e-01 100.0% 98.5%
1cbiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.61 54.0 4.54e-01 100.0% 98.5%
4uoiC00 3.30.160.890 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C 0.61 35.0 4.07e-01 71.8% 84.3%
1xkiA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.60 53.0 4.53e-01 100.0% 75.0%
1vwxT01 2.30.30.70 Mainly Beta › Roll › SH3 type barrels. › Ribosomal protein L21 0.60 46.0 4.33e-01 100.0% 67.0%
3fvcA03 2.30.29.100 Mainly Beta › Roll › PH-domain like › 0.60 52.0 4.70e-01 100.0% 94.5%
3kyfA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 43.0 3.88e-01 78.2% 86.0%
1ge8A00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.59 49.0 3.45e-01 89.7% 49.2%
4q0yA00 2.60.40.4400 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 44.0 3.72e-01 79.5% 49.6%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.58 51.0 4.25e-01 100.0% 65.2%
1wgvA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 43.0 3.75e-01 80.8% 77.4%
5i4eA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.57 33.0 3.94e-01 92.3% 93.5%
4f88102 3.90.1720.60 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.57 43.0 3.25e-01 100.0% 31.0%
2ymsC00 2.40.10.480 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.56 42.0 4.26e-01 97.4% 82.7%
2x8fA02 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.56 50.0 4.72e-01 100.0% 97.9%
2lydA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 49.0 4.15e-01 100.0% 61.9%
6mv2A01 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 42.0 3.88e-01 80.8% 83.3%
4immA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 50.0 3.19e-01 94.9% 100.0%
3d6wB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 38.0 4.03e-01 91.0% 81.4%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 41.0 3.92e-01 80.8% 91.3%
1iwmA00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.55 48.0 3.74e-01 100.0% 84.2%
3nvqA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 44.0 2.86e-01 94.9% 38.5%
1r5mA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 48.0 3.10e-01 97.4% 98.9%
1pbyA02 2.40.128.120 Mainly Beta › Beta Barrel › Lipocalin › Quinohemoprotein amine dehydrogenase alpha subunit, domain 2 0.54 47.0 4.32e-01 100.0% 91.5%
6j8yC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.53 47.0 3.33e-01 100.0% 46.3%
4gq1A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.53 46.0 2.98e-01 94.9% 25.1%
3a1jB00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.52 46.0 3.22e-01 100.0% 42.0%
5k19A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 47.0 2.96e-01 97.4% 97.6%
3ge2A00 2.40.128.50 Mainly Beta › Beta Barrel › Lipocalin › 0.52 46.0 4.45e-01 100.0% 93.3%
2ichA01 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.52 47.0 3.57e-01 100.0% 57.0%
7mhwA01 2.40.128.10 Mainly Beta › Beta Barrel › Lipocalin › 0.52 45.0 4.37e-01 100.0% 100.0%
1te0A03 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.51 38.0 3.59e-01 82.1% 73.0%
1s4uX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.51 42.0 2.78e-01 93.6% 39.6%
3hpeA00 2.40.128.110 Mainly Beta › Beta Barrel › Lipocalin › Lipid/polyisoprenoid-binding, YceI-like 0.50 41.0 3.43e-01 100.0% 99.4%
1olzA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.50 45.0 2.74e-01 97.4% 98.7%
4rzkA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 38.0 3.73e-01 84.6% 74.7%
4aghA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.50 35.0 3.51e-01 94.9% 71.2%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.50 35.0 3.73e-01 100.0% 84.1%
2cduA02 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.50 44.0 3.60e-01 100.0% 79.5%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3939076 220.1.1.22 beta barrels › PH domain-like › PH domain-like › PH domain-like › FERM_C 0.77 60.0 5.50e-01 100.0% 64.0%
3276072 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.71 61.0 5.47e-01 100.0% 68.6%
4545531 220.1.1.255 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_10 0.71 47.0 4.68e-01 70.5% 66.3%
4957336 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 56.0 3.56e-01 100.0% 16.8%
3501905 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 64.0 5.86e-01 100.0% 79.0%
3407758 220.1.1.8 beta barrels › PH domain-like › PH domain-like › PH domain-like › GRAM 0.70 58.0 5.08e-01 100.0% 60.9%
3594856 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.70 63.0 5.60e-01 100.0% 73.6%
4034521 220.1.1.87 beta barrels › PH domain-like › PH domain-like › PH domain-like › bPH_3 0.69 60.0 5.48e-01 100.0% 73.0%
3456496 4.1.1.75 beta barrels › SH3 › SH3 › SH3 › NdhS 0.69 47.0 4.16e-01 100.0% 47.8%
5081361 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 58.0 5.34e-01 98.7% 72.0%
3225056 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 62.0 5.53e-01 100.0% 70.9%
959119 4.1.1.75 beta barrels › SH3 › SH3 › SH3 › NdhS 0.69 46.0 5.33e-01 100.0% 100.0%
3567195 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.69 63.0 4.76e-01 100.0% 46.9%
4404324 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 55.0 5.39e-01 93.6% 80.0%
4177200 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.68 44.0 5.07e-01 100.0% 94.5%
3288866 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.68 56.0 4.89e-01 100.0% 59.2%
3257304 220.1.1.2 beta barrels › PH domain-like › PH domain-like › PH domain-like › WH1 0.67 60.0 5.45e-01 100.0% 77.1%
3532192 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.67 60.0 5.20e-01 100.0% 80.0%
4941299 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.66 47.0 4.56e-01 97.4% 68.2%
5011500 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.66 49.0 4.53e-01 100.0% 62.0%
5047735 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 59.0 4.71e-01 100.0% 51.7%
3508939 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.65 58.0 4.92e-01 100.0% 63.1%
5009635 3534.1.1.5 beta barrels › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › DUF1854 0.65 48.0 4.96e-01 87.2% 81.3%
3227550 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 58.0 4.64e-01 100.0% 69.0%
4946028 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 49.0 4.66e-01 100.0% 68.9%
3515993 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.65 57.0 5.00e-01 100.0% 68.3%
3876027 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.65 58.0 4.68e-01 100.0% 55.3%
5067227 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 48.0 4.74e-01 100.0% 74.7%
4937705 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.64 48.0 4.60e-01 100.0% 68.9%
4946972 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 47.0 4.56e-01 100.0% 67.8%
5050368 4.1.1.14 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L21e 0.64 48.0 4.51e-01 100.0% 64.3%
3496475 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.64 57.0 4.72e-01 100.0% 60.0%
3937216 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.64 57.0 4.82e-01 100.0% 62.3%
3648024 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.64 57.0 4.86e-01 100.0% 66.4%
3941391 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.64 40.0 4.49e-01 96.2% 83.3%
3266702 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 53.0 5.02e-01 98.7% 76.3%
3790351 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.63 56.0 4.87e-01 100.0% 69.2%
167402 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.63 55.0 4.76e-01 100.0% 62.8%
3754415 9.1.1.1 beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › Lipocalin 0.63 56.0 4.46e-01 100.0% 69.0%
3628479 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 55.0 3.93e-01 100.0% 36.7%
3233686 220.1.1.13 beta barrels › PH domain-like › PH domain-like › PH domain-like › DCP1 0.62 54.0 4.44e-01 100.0% 57.2%
3510681 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 51.0 5.22e-01 100.0% 94.7%
3259514 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 54.0 4.68e-01 100.0% 65.0%
4276957 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.60 40.0 4.49e-01 91.0% 96.4%
4351809 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.60 41.0 4.59e-01 91.0% 93.3%
4939066 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.60 50.0 4.21e-01 91.0% 93.0%
3941913 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.59 39.0 4.44e-01 89.7% 96.4%
5028024 227.1.1.6 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_C 0.59 48.0 4.07e-01 89.7% 90.0%
4973804 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 44.0 4.49e-01 91.0% 82.7%
4927889 319.1.1.4 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › ArsA_HSP20 0.58 43.0 4.37e-01 84.6% 80.0%
3602759 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.58 41.0 4.54e-01 88.5% 96.7%
3933892 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 42.0 4.59e-01 100.0% 100.0%
4098870 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.57 46.0 4.34e-01 88.5% 72.6%
3584039 5.1.5.89 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PF31099 0.57 41.0 2.68e-01 98.7% 15.4%
3280386 4.8.1.0 beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.56 38.0 4.29e-01 89.7% 100.0%
3910728 319.1.1.3 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.56 42.0 3.43e-01 82.1% 63.2%
3395174 5.1.4.158 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_HPS5 0.55 48.0 3.10e-01 94.9% 96.1%
5044987 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 38.0 3.50e-01 100.0% 54.3%
4545857 71.1.1.2 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA 0.55 48.0 3.55e-01 96.2% 73.8%
3933904 5.1.4.333 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF31099 0.54 48.0 2.93e-01 94.9% 93.9%
3169706 4.7.1.1 beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 0.54 44.0 3.65e-01 92.3% 64.7%
4025365 220.1.1.74 beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H 0.54 47.0 4.20e-01 100.0% 70.0%
3822364 3270.1.1.1 a+b two layers › a+b domain in heme oxygenase › a+b domain in heme oxygenase › a+b domain in heme oxygenase › DUF2470 0.53 45.0 4.40e-01 96.2% 92.9%
3613171 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 46.0 3.52e-01 100.0% 100.0%
5037155 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 47.0 2.89e-01 97.4% 87.5%
3721374 319.1.1.0 beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.52 41.0 3.83e-01 85.9% 70.0%
3913372 5.1.4.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.52 43.0 2.87e-01 92.3% 37.0%
3601989 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 45.0 2.85e-01 98.7% 27.0%
2726885 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.52 46.0 4.08e-01 100.0% 93.8%
3253996 5.1.5.73 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › PEP5_VPS11_N 0.52 43.0 2.84e-01 97.4% 20.6%
4357447 5.1.4.158 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_HPS5 0.51 46.0 2.87e-01 97.4% 95.4%