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STL6-S73_scaffold_1_prodigal-single.1__X__X__00151
Bact-VirSTL6-S73_scaffold_1_prodigal-single.1__X__X__00151
Identity
- Kingdom:
- phage
Quality
80.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 50-128
Domain cluster:
rep: NC_071041.1__YP_010679680.1__PQE67_gp053__00251__D2-76
CATH (49)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3os7A00 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.72 | 50.0 | 3.26e-01 | 73.4% | 32.3% |
| 3s27B01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.70 | 56.0 | 4.71e-01 | 87.3% | 83.5% |
| 3ge2A00 | 2.40.128.50 | Mainly Beta › Beta Barrel › Lipocalin › | 0.68 | 49.0 | 4.73e-01 | 75.9% | 66.3% |
| 1wv4B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.68 | 54.0 | 4.34e-01 | 86.1% | 93.5% |
| 1wmiA00 | 3.30.2310.20 | Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like | 0.68 | 43.0 | 4.14e-01 | 88.6% | 56.8% |
| 3v5nB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.67 | 46.0 | 3.45e-01 | 70.9% | 75.5% |
| 4rbnA01 | 3.10.450.330 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.65 | 53.0 | 4.54e-01 | 89.9% | 90.7% |
| 5eo6B00 | 3.40.1500.10 | Alpha Beta › 3-Layer(aba) Sandwich › oxygen-dependent coproporphyrinogen oxidase › Coproporphyrinogen III oxidase, aerobic | 0.65 | 45.0 | 3.00e-01 | 70.9% | 28.0% |
| 4fb5A02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.65 | 44.0 | 3.15e-01 | 70.9% | 69.4% |
| 2v43A01 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.65 | 51.0 | 3.87e-01 | 97.5% | 36.6% |
| 4rs6A01 | 3.30.1120.30 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › POLO box domain | 0.65 | 48.0 | 4.19e-01 | 89.9% | 52.5% |
| 1rypA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.65 | 44.0 | 3.09e-01 | 70.9% | 66.3% |
| 4h3vB02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.64 | 44.0 | 3.15e-01 | 70.9% | 71.0% |
| 1sgoA01 | 3.30.2280.10 | Alpha Beta › 2-Layer Sandwich › copper amine oxidase-like fold › Hypothetical protein (hspc210) | 0.62 | 44.0 | 3.93e-01 | 96.2% | 53.7% |
| 4fr9A00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.62 | 44.0 | 3.67e-01 | 98.7% | 41.8% |
| 2jkgA00 | 3.30.450.30 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Dynein light chain 2a, cytoplasmic | 0.61 | 46.0 | 3.53e-01 | 78.5% | 84.8% |
| 2ffsA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.61 | 54.0 | 4.42e-01 | 98.7% | 60.0% |
| 7snsB01 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.60 | 54.0 | 4.23e-01 | 98.7% | 68.5% |
| 1mhmA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.60 | 48.0 | 3.36e-01 | 86.1% | 28.5% |
| 1a87A01 | 3.30.1120.60 | Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › Colicin | 0.60 | 51.0 | 4.78e-01 | 96.2% | 75.3% |
| 2gu3A02 | 3.10.450.40 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.59 | 43.0 | 4.79e-01 | 94.9% | 96.8% |
| 1qj8A00 | 2.40.160.20 | Mainly Beta › Beta Barrel › Porin › | 0.59 | 47.0 | 3.85e-01 | 87.3% | 79.7% |
| 2w7qB00 | 2.50.20.10 | Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX | 0.59 | 47.0 | 3.62e-01 | 87.3% | 85.0% |
| 3dueA00 | 3.40.1420.30 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › | 0.58 | 43.0 | 3.68e-01 | 97.5% | 49.6% |
| 2a5zA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.57 | 52.0 | 3.65e-01 | 100.0% | 76.2% |
| 4obiA00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.56 | 45.0 | 4.39e-01 | 87.3% | 79.3% |
| 2i0rA01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 50.0 | 3.26e-01 | 100.0% | 40.7% |
| 3fgbA00 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.56 | 49.0 | 3.23e-01 | 100.0% | 44.4% |
| 4mveA00 | 2.40.128.580 | Mainly Beta › Beta Barrel › Lipocalin › GXWXG domain | 0.55 | 44.0 | 3.62e-01 | 87.3% | 55.8% |
| 1t6lA00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.55 | 44.0 | 3.22e-01 | 91.1% | 46.6% |
| 1tluA00 | 3.60.90.10 | Alpha Beta › 4-Layer Sandwich › S-adenosylmethionine decarboxylase › S-adenosylmethionine decarboxylase | 0.55 | 42.0 | 3.76e-01 | 84.8% | 57.3% |
| 2wjsA02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.54 | 46.0 | 3.62e-01 | 97.5% | 63.4% |
| 7mhuA01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.54 | 48.0 | 3.12e-01 | 100.0% | 46.3% |
| 2r19A00 | 2.60.450.10 | Mainly Beta › Sandwich › lipopolysaccharide transport protein A fold › Lipopolysaccharide (LPS) transport protein A like domain | 0.54 | 49.0 | 4.06e-01 | 98.7% | 64.4% |
| 3rbyA01 | 2.40.128.320 | Mainly Beta › Beta Barrel › Lipocalin › Protein HRI1, N-terminal domain | 0.54 | 43.0 | 3.51e-01 | 87.3% | 92.0% |
| 1ospO02 | 3.90.930.1 | Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › | 0.54 | 46.0 | 3.86e-01 | 98.7% | 55.5% |
| 3bdrA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 48.0 | 3.85e-01 | 100.0% | 51.9% |
| 2wjsA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 46.0 | 3.66e-01 | 100.0% | 67.4% |
| 6eufA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 48.0 | 3.22e-01 | 100.0% | 45.1% |
| 1zylA01 | 3.30.200.70 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › | 0.53 | 43.0 | 4.58e-01 | 91.1% | 100.0% |
| 1wthA02 | 3.10.450.190 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 42.0 | 3.91e-01 | 86.1% | 99.0% |
| 5mc9A02 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 45.0 | 3.53e-01 | 97.5% | 62.6% |
| 2bklA02 | 2.130.10.120 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain | 0.53 | 47.0 | 3.09e-01 | 100.0% | 37.3% |
| 2xepB01 | 3.10.450.280 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 47.0 | 4.15e-01 | 98.7% | 86.8% |
| 1a8dA01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 43.0 | 3.15e-01 | 96.2% | 59.8% |
| 2zutA04 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.51 | 33.0 | 3.61e-01 | 93.7% | 86.4% |
| 3h3hB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 44.0 | 3.90e-01 | 98.7% | 96.7% |
| 3o4hA01 | 2.130.10.150 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Peptidase/esterase 'gauge' domain | 0.51 | 44.0 | 3.04e-01 | 100.0% | 43.0% |
| 4h0aA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.51 | 41.0 | 2.82e-01 | 88.6% | 83.6% |
ECOD (58)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3228083 | 207.1.1.81 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › FTH | 0.73 | 46.0 | 3.14e-01 | 70.9% | 19.2% |
| 3618896 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.71 | 54.0 | 6.00e-01 | 94.9% | 98.4% |
| 3176386 | 298.1.1.8 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C | 0.70 | 51.0 | 3.78e-01 | 75.9% | 75.8% |
| 3736590 | 9.14.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W | 0.69 | 47.0 | 4.39e-01 | 70.9% | 58.0% |
| 6659 | 4350.1.1.1 ↗ | a+b two layers › PG1388-like › PG1388-like › PG1388-like › DUF3256 | 0.68 | 55.0 | 4.08e-01 | 86.1% | 44.7% |
| 134104 | 9.1.1.22 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF3642 | 0.68 | 49.0 | 4.73e-01 | 75.9% | 66.3% |
| 3704328 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.68 | 47.0 | 4.63e-01 | 86.1% | 67.5% |
| 3585414 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.68 | 50.0 | 4.43e-01 | 91.1% | 55.5% |
| 3793430 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.67 | 47.0 | 4.39e-01 | 72.2% | 65.3% |
| 4978331 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.66 | 43.0 | 4.61e-01 | 87.3% | 75.7% |
| 3929502 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.65 | 52.0 | 4.93e-01 | 86.1% | 92.6% |
| 4818076 | 12.3.1.28 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Glyco_hydro_92N | 0.64 | 51.0 | 3.62e-01 | 86.1% | 97.0% |
| 4031999 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.63 | 47.0 | 4.61e-01 | 84.8% | 72.9% |
| 5053933 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.62 | 47.0 | 5.15e-01 | 97.5% | 96.9% |
| 4003932 | 292.2.1.0 ↗ | a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain | 0.62 | 51.0 | 4.40e-01 | 88.6% | 59.2% |
| 3572103 | 220.1.1.74 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PIG-H | 0.61 | 49.0 | 4.07e-01 | 96.2% | 50.4% |
| 3952333 | 243.3.1.3 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY | 0.61 | 47.0 | 5.14e-01 | 98.7% | 100.0% |
| 3781776 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.61 | 55.0 | 3.64e-01 | 100.0% | 38.7% |
| 5057301 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.60 | 42.0 | 3.00e-01 | 72.2% | 33.6% |
| 3980136 | 243.3.1.21 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › YsaB | 0.60 | 49.0 | 5.04e-01 | 96.2% | 92.0% |
| 3062889 | 9.1.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins | 0.60 | 53.0 | 4.12e-01 | 98.7% | 63.8% |
| 3440815 | 5.1.11.35 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › Beta-prop_AT5G49610-like | 0.59 | 53.0 | 3.47e-01 | 100.0% | 31.8% |
| 1554358 | 3146.1.1.1 ↗ | a+b complex topology › gH main domain › gH main domain › gH main domain › Herpes_glycop_H | 0.59 | 45.0 | 2.69e-01 | 82.3% | 23.3% |
| 3924310 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 52.0 | 3.33e-01 | 97.5% | 23.2% |
| 3627380 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.58 | 53.0 | 3.48e-01 | 100.0% | 39.1% |
| 3462291 | 5.1.3.142 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_AT5G49610-like | 0.58 | 52.0 | 3.48e-01 | 100.0% | 42.8% |
| 3940470 | 5.1.4.320 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_LRRK2 | 0.58 | 53.0 | 3.31e-01 | 100.0% | 33.9% |
| 3938627 | 9.11.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like | 0.58 | 49.0 | 5.05e-01 | 94.9% | 98.7% |
| 3534580 | 10.1.1.17 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Laminin_G_2 | 0.58 | 48.0 | 4.23e-01 | 96.2% | 79.2% |
| 5013467 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.58 | 51.0 | 3.44e-01 | 100.0% | 37.4% |
| 3276059 | 5.1.4.329 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PF30693 | 0.57 | 52.0 | 3.28e-01 | 100.0% | 34.7% |
| 3918436 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.57 | 50.0 | 3.28e-01 | 100.0% | 31.5% |
| 4969673 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 51.0 | 3.40e-01 | 100.0% | 42.7% |
| 3388479 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 51.0 | 3.27e-01 | 100.0% | 36.8% |
| 4946923 | 246.2.1.1 ↗ | a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos | 0.57 | 44.0 | 3.15e-01 | 86.1% | 56.8% |
| 441013 | 79.1.1.1 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Gp5_C | 0.56 | 36.0 | 2.66e-01 | 70.9% | 23.3% |
| 5041549 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 50.0 | 3.44e-01 | 100.0% | 41.8% |
| 3770717 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.56 | 51.0 | 3.31e-01 | 100.0% | 59.1% |
| 3686499 | 298.1.1.25 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › ox_reductase_C | 0.56 | 48.0 | 3.29e-01 | 93.7% | 57.0% |
| 3511321 | 5.1.4.298 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_ELP1_1st, Beta-prop_ELP1_2nd | 0.56 | 50.0 | 2.97e-01 | 100.0% | 18.9% |
| 5058595 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.56 | 47.0 | 3.03e-01 | 91.1% | 22.0% |
| 3538579 | 5.1.5.135 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Sema | 0.55 | 50.0 | 3.06e-01 | 100.0% | 45.3% |
| 3851509 | 5.1.4.12 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema | 0.55 | 50.0 | 3.05e-01 | 100.0% | 46.0% |
| 5058514 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.55 | 43.0 | 4.51e-01 | 98.7% | 94.3% |
| 3936285 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.55 | 49.0 | 3.36e-01 | 100.0% | 49.5% |
| 4016127 | 5.1.4.87 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD | 0.55 | 40.0 | 2.51e-01 | 89.9% | 14.5% |
| 3187236 | 5.1.4.242 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N | 0.54 | 49.0 | 3.17e-01 | 100.0% | 40.3% |
| 4951148 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.54 | 47.0 | 3.11e-01 | 100.0% | 33.9% |
| 3741046 | 5.1.4.348 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_1st | 0.54 | 48.0 | 3.07e-01 | 100.0% | 35.4% |
| 3441510 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 46.0 | 3.23e-01 | 100.0% | 54.4% |
| 3231343 | 77.1.1.10 ↗ | beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › PF28998 | 0.53 | 48.0 | 4.00e-01 | 98.7% | 60.0% |
| 5040209 | 5.1.4.87 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › LVIVD | 0.52 | 46.0 | 2.92e-01 | 100.0% | 32.3% |
| 119302 | 3146.1.1.0 ↗ | a+b complex topology › gH main domain › gH main domain › gH main domain | 0.52 | 42.0 | 2.83e-01 | 89.9% | 26.5% |
| 3266969 | 5.1.4.116 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › IKI3 | 0.52 | 46.0 | 3.15e-01 | 100.0% | 46.4% |
| 4616909 | 12.3.1.24 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas | 0.52 | 46.0 | 3.17e-01 | 100.0% | 43.5% |
| 4975535 | 512.1.1.1 ↗ | a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_1st | 0.52 | 44.0 | 4.41e-01 | 98.7% | 91.3% |
| 4030568 | 331.10.1.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox | 0.52 | 46.0 | 3.04e-01 | 100.0% | 69.0% |
| 5061484 | 331.10.2.1 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase › AdoMet_dc | 0.51 | 44.0 | 3.96e-01 | 98.7% | 79.8% |
D2
high
residues 150-219
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3v9rA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.68 | 46.0 | 4.30e-01 | 70.0% | 56.8% |
| 4mspB02 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.66 | 41.0 | 4.03e-01 | 70.0% | 58.7% |
| 4lnuB01 | 3.40.50.1440 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tubulin/FtsZ, GTPase domain | 0.62 | 43.0 | 2.93e-01 | 72.9% | 57.9% |
| 1z21A00 | 1.10.10.1000 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Type III secretion system virulence factor YopR, core domain | 0.62 | 40.0 | 3.67e-01 | 81.4% | 49.0% |
| 7kfuC02 | 1.20.120.920 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › CRISPR-associated endonuclease Cas1, C-terminal domain | 0.60 | 46.0 | 3.15e-01 | 98.6% | 24.5% |
| 3ufeA02 | 1.20.58.1950 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 37.0 | 4.12e-01 | 70.0% | 83.0% |
| 2ktmA00 | 1.10.790.10 | Mainly Alpha › Orthogonal Bundle › Major Prion Protein › Prion/Doppel protein, beta-ribbon domain | 0.59 | 40.0 | 4.06e-01 | 70.0% | 82.4% |
| 1rypA00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.58 | 50.0 | 3.45e-01 | 95.7% | 54.7% |
| 1v57A03 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.58 | 41.0 | 3.22e-01 | 74.3% | 43.1% |
| 1hlvA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.58 | 39.0 | 4.14e-01 | 80.0% | 80.0% |
| 1c0gA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.56 | 38.0 | 3.55e-01 | 71.4% | 90.2% |
| 2pmzK00 | 3.90.940.10 | Alpha Beta › Alpha-Beta Complex › Eukaryotic RPB6 RNA polymerase subunit › RNA polymerase subunit, RPB6/omega | 0.56 | 40.0 | 3.86e-01 | 75.7% | 80.5% |
| 5oomJ01 | 3.30.1550.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein L11, N-terminal domain › Ribosomal protein L11/L12, N-terminal domain | 0.56 | 33.0 | 3.37e-01 | 97.1% | 57.6% |
| 4kw3A00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.56 | 50.0 | 3.38e-01 | 98.6% | 64.3% |
| 1nubA01 | 3.30.60.30 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.56 | 29.0 | 2.78e-01 | 74.3% | 40.2% |
| 5cy5B00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.56 | 40.0 | 3.10e-01 | 75.7% | 81.2% |
| 6juvB01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 40.0 | 3.93e-01 | 94.3% | 70.7% |
| 2c4kA01 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.55 | 43.0 | 3.26e-01 | 85.7% | 82.0% |
| 6todA01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.54 | 48.0 | 3.19e-01 | 100.0% | 63.8% |
| 1vwxg01 | 6.20.370.70 | Special › Other non-globular › Rhinovirus 14, subunit 4 › | 0.54 | 23.0 | 2.99e-01 | 100.0% | 62.2% |
| 5mp7A01 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 42.0 | 3.19e-01 | 85.7% | 83.3% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 37.0 | 4.28e-01 | 95.7% | 100.0% |
| 1b04A03 | 1.10.287.610 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.52 | 35.0 | 3.71e-01 | 82.9% | 77.4% |
| 1bd3A00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 45.0 | 3.15e-01 | 97.1% | 83.9% |
| 1vf7A03 | 1.10.287.470 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.52 | 37.0 | 3.95e-01 | 95.7% | 86.7% |
| 1gvfB00 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.52 | 43.0 | 2.91e-01 | 92.9% | 92.0% |
| 3h1nA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 40.0 | 3.40e-01 | 85.7% | 92.5% |
| 1x4tA01 | 1.10.287.660 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin | 0.51 | 38.0 | 4.14e-01 | 95.7% | 94.8% |
| 5i9eA03 | 3.90.640.10 | Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 | 0.51 | 41.0 | 3.62e-01 | 92.9% | 90.3% |
| 1hbxA01 | 3.40.1810.10 | Alpha Beta › 3-Layer(aba) Sandwich › SRF-like › Transcription factor, MADS-box | 0.51 | 35.0 | 3.55e-01 | 72.9% | 91.5% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4989283 | 3009.1.1.3 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Thioredoxin_5 | 0.69 | 49.0 | 3.44e-01 | 74.3% | 60.9% |
| 3938116 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.66 | 47.0 | 3.17e-01 | 74.3% | 73.3% |
| 3228509 | 101.1.4.12 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like › MSC | 0.65 | 41.0 | 3.33e-01 | 95.7% | 33.3% |
| 3774633 | 593.1.1.1 ↗ | alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1 | 0.62 | 47.0 | 3.26e-01 | 82.9% | 26.3% |
| 3486786 | 165.3.1.0 ↗ | alpha duplicates or obligate multimers › Dimerisation interlock › Phenylalanine zipper › Phenylalanine zipper | 0.60 | 41.0 | 4.56e-01 | 98.6% | 89.1% |
| 2755218 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.60 | 41.0 | 2.97e-01 | 71.4% | 54.9% |
| 3517280 | 3352.1.1.0 ↗ | alpha bundles › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain › STT3/PglB/AglB transmembrane domain | 0.60 | 43.0 | 2.76e-01 | 75.7% | 26.6% |
| 2417935 | 101.1.2.192 ↗ | alpha arrays › HTH › HTH › winged helix domain › B_lactamase-like_C | 0.60 | 43.0 | 4.32e-01 | 92.9% | 75.7% |
| 3303720 | 3336.1.1.1 ↗ | alpha complex topology › plant-specific ROP nucleotide exchanger (PRONE) domain › plant-specific ROP nucleotide exchanger (PRONE) domain › plant-specific ROP nucleotide exchanger (PRONE) domain › PRONE | 0.59 | 46.0 | 2.91e-01 | 85.7% | 28.5% |
| 4677683 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.59 | 50.0 | 3.56e-01 | 95.7% | 74.9% |
| 3512559 | 192.1.1.37 ↗ | alpha bundles › Long alpha-hairpin › GreA transcript cleavage protein, N-terminal domain › GreA transcript cleavage protein, N-terminal domain › DUF7753 | 0.58 | 43.0 | 4.51e-01 | 100.0% | 84.6% |
| 3574593 | 109.4.1.5 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_1 | 0.58 | 41.0 | 2.87e-01 | 72.9% | 42.0% |
| 5002999 | 101.11.1.0 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0.58 | 39.0 | 3.77e-01 | 98.6% | 61.3% |
| 3933947 | 5001.1.1.206 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Srg, 7TM_GPCR_Srv | 0.58 | 41.0 | 2.48e-01 | 75.7% | 44.6% |
| 5082190 | 7575.1.1.0 ↗ | a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like | 0.57 | 43.0 | 3.02e-01 | 81.4% | 47.7% |
| 3480783 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.57 | 40.0 | 2.56e-01 | 100.0% | 15.5% |
| 3519143 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.57 | 41.0 | 2.68e-01 | 77.1% | 73.8% |
| 5016947 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.56 | 49.0 | 3.60e-01 | 100.0% | 90.5% |
| 5057127 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 39.0 | 2.67e-01 | 74.3% | 43.1% |
| 3235613 | 5054.1.1.8 ↗ | alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans_2 | 0.55 | 47.0 | 3.08e-01 | 95.7% | 24.4% |
| 3632211 | 2485.1.1.10 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › DSBA | 0.55 | 34.0 | 2.56e-01 | 92.9% | 23.2% |
| 3583221 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 41.0 | 3.12e-01 | 78.6% | 58.8% |
| 3734253 | 3009.1.1.1 ↗ | alpha arrays › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › Insertion subdomain in DsbA-like › DSBA | 0.55 | 35.0 | 2.52e-01 | 84.3% | 20.4% |
| 3783691 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.55 | 47.0 | 3.44e-01 | 100.0% | 56.2% |
| 5065472 | 223.1.1.2 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › PAS | 0.54 | 32.0 | 2.90e-01 | 100.0% | 41.1% |
| 3957239 | 3781.1.1.1 ↗ | a+b two layers › Ribosomal protein L11/L12e N-terminal domain-like › Ribosomal protein L11/L12e N-terminal domain › Ribosomal protein L11/L12e N-terminal domain › Ribosomal_L11_N | 0.54 | 31.0 | 3.48e-01 | 100.0% | 82.2% |
| 4250601 | 186.1.1.0 ↗ | alpha arrays › lambda integrase-N-like › lambda integrase-N › lambda integrase-N | 0.54 | 44.0 | 3.50e-01 | 98.6% | 41.8% |
| 3268434 | 207.1.1.22 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › LRR_6 | 0.54 | 41.0 | 2.43e-01 | 82.9% | 21.4% |
| 3594033 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.54 | 39.0 | 2.85e-01 | 81.4% | 76.0% |
| 4441043 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.53 | 44.0 | 3.54e-01 | 98.6% | 44.4% |
| 4015450 | 3843.1.1.0 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K | 0.53 | 39.0 | 3.95e-01 | 100.0% | 78.6% |
| 4942434 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.53 | 39.0 | 3.55e-01 | 78.6% | 66.3% |
| 3242557 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.53 | 41.0 | 3.28e-01 | 87.1% | 65.3% |
| 3795168 | 2007.1.6.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › ELFV_dehydrog_N | 0.52 | 42.0 | 2.96e-01 | 88.6% | 46.1% |
| 3818311 | 216.1.1.3 ↗ | a+b two layers › UBC-like › UBC-like › UBC-like › UEV | 0.52 | 38.0 | 2.87e-01 | 75.7% | 55.6% |
| 3991948 | 2007.1.6.3 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Aminoacid dehydrogenase-like, N-terminal domain › ELFV_dehydrog_N | 0.52 | 42.0 | 3.05e-01 | 88.6% | 53.0% |
| 4041349 | 7573.1.1.2 ↗ | a/b three-layered sandwiches › PRTase-like › PRTase-like › PRTase-like › Pribosyltran_N | 0.52 | 41.0 | 3.18e-01 | 85.7% | 89.0% |
| 3922833 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.52 | 45.0 | 3.02e-01 | 100.0% | 86.8% |
| 3923219 | 5001.1.1.44 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srv | 0.51 | 45.0 | 2.94e-01 | 98.6% | 83.8% |
| 4002132 | 5001.1.1.1 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 | 0.50 | 43.0 | 2.74e-01 | 92.9% | 45.5% |