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STL6-S73_scaffold_1_prodigal-single.1__X__X__00203
Bact-VirSTL6-S73_scaffold_1_prodigal-single.1__X__X__00203
Identity
- Kingdom:
- phage
Quality
86.5
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-90
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xp8A02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.80 | 54.0 | 6.34e-01 | 82.8% | 100.0% |
| 5jrjA02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.78 | 52.0 | 6.09e-01 | 81.6% | 100.0% |
| 3hr8A02 | 3.30.250.10 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › RecA protein, C-terminal domain | 0.71 | 52.0 | 5.61e-01 | 85.1% | 89.3% |
| 1li5B01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.55 | 44.0 | 3.13e-01 | 86.2% | 45.7% |
| 3sp1A01 | 3.40.50.620 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs | 0.52 | 41.0 | 2.97e-01 | 86.2% | 42.7% |
| 3qi7A03 | 3.30.30.130 | Alpha Beta › 2-Layer Sandwich › Defensin A-like › | 0.51 | 22.0 | 2.97e-01 | 71.3% | 77.8% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3644530 | 502.1.1.1 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C | 0.82 | 55.0 | 6.51e-01 | 83.9% | 100.0% |
| 4339052 | 502.1.1.1 ↗ | a+b two layers › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › Anti-LPS factor/recA domain › RecA_C | 0.79 | 54.0 | 5.64e-01 | 83.9% | 76.2% |
| None | — | 0.64 | 49.0 | 3.31e-01 | 82.8% | 40.3% | |
| None | — | 0.60 | 48.0 | 3.18e-01 | 86.2% | 37.5% | |
| 3492068 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.58 | 42.0 | 2.87e-01 | 100.0% | 21.6% |
| 4232630 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.57 | 41.0 | 2.87e-01 | 75.9% | 32.8% |
| 4303833 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.56 | 40.0 | 2.86e-01 | 77.0% | 33.3% |
| 4383749 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.55 | 39.0 | 2.75e-01 | 75.9% | 35.2% |
| 4325434 | 140.1.1.0 ↗ | alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases | 0.55 | 40.0 | 2.46e-01 | 77.0% | 16.8% |
| None | — | 0.55 | 40.0 | 2.46e-01 | 77.0% | 17.0% | |
| 4999032 | 321.1.1.1 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Gln-synt_C | 0.54 | 45.0 | 3.13e-01 | 96.6% | 90.4% |
| 4682878 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 42.0 | 2.61e-01 | 86.2% | 17.2% |
| 4192177 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.54 | 43.0 | 2.81e-01 | 87.4% | 25.4% |
| 4932556 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.53 | 42.0 | 2.99e-01 | 97.7% | 26.4% |
| 3577690 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.53 | 34.0 | 3.68e-01 | 70.1% | 77.3% |
| None | — | 0.53 | 42.0 | 2.98e-01 | 87.4% | 35.6% | |
| None | — | 0.53 | 42.0 | 2.65e-01 | 86.2% | 20.7% | |
| 141178 | 2.1.1.75 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC13_N | 0.53 | 37.0 | 2.86e-01 | 72.4% | 59.4% |
| None | — | 0.52 | 39.0 | 2.46e-01 | 80.5% | 19.0% | |
| None | — | 0.52 | 41.0 | 2.53e-01 | 86.2% | 17.1% | |
| 4112234 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.52 | 41.0 | 2.70e-01 | 86.2% | 25.3% |
| 3362575 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.52 | 44.0 | 2.72e-01 | 96.6% | 18.8% |
| 4389484 | 2005.1.1.7 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1d | 0.51 | 43.0 | 3.03e-01 | 94.3% | 37.2% |
| 4101712 | 2005.1.1.0 ↗ | a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains | 0.51 | 43.0 | 2.86e-01 | 95.4% | 28.0% |
| 5053248 | 321.1.1.1 ↗ | a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Gln-synt_C | 0.50 | 41.0 | 2.95e-01 | 98.9% | 90.4% |