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STL6-S73_scaffold_1_prodigal-single.1__X__X__00225

Bact-Vir

STL6-S73_scaffold_1_prodigal-single.1__X__X__00225

Identity

Kingdom:
phage

Quality

90.7 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1-57
PDB
Domain cluster: representative
D2 high residues 69-186
PDB
Domain cluster: rep: KU530220.1__AMD42788.1__SEA_XKCD426_47__00047__D98-202
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF04203.19 best Sortase 80.8 1.00e-22 96.6% 98.4%
CATH (18)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2w1kA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.93 90.0 7.16e-01 100.0% 62.0%
5k9aA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.92 88.0 6.97e-01 100.0% 60.0%
2w1jA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.91 88.0 7.19e-01 100.0% 66.2%
3fn5B00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.91 88.0 7.68e-01 100.0% 79.8%
4d70A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.90 87.0 7.66e-01 100.0% 78.1%
2kw8A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.90 86.0 7.66e-01 100.0% 79.1%
5go5A00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.88 85.0 7.63e-01 100.0% 86.8%
3psqB00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.86 81.0 6.87e-01 100.0% 91.2%
1t2pA00 2.40.260.10 Mainly Beta › Beta Barrel › Sortase; Chain: A; › Sortase 0.83 79.0 7.31e-01 100.0% 91.7%
1vhkA01 2.40.240.20 Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Hypothetical PUA domain-like; domain 1 0.62 36.0 4.30e-01 94.1% 90.4%
4p5nA00 2.30.30.1060 Mainly Beta › Roll › SH3 type barrels. › 0.62 30.0 3.63e-01 93.2% 70.3%
2xk0A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 26.0 3.33e-01 83.9% 69.6%
1uwkB01 3.40.1770.10 Alpha Beta › 3-Layer(aba) Sandwich › Urocanase fold › Urocanase superfamily 0.58 51.0 3.68e-01 98.3% 79.1%
5c94A00 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.57 38.0 3.89e-01 99.2% 69.8%
2q6iA02 2.40.30.90 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacterial fluorinating enzyme like 0.56 37.0 3.90e-01 94.9% 75.7%
5xd6B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.52 37.0 4.10e-01 73.7% 97.9%
1vloA04 2.40.30.110 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Aminomethyltransferase beta-barrel domains 0.52 33.0 3.71e-01 81.4% 83.5%
4wzuA00 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.50 37.0 2.72e-01 78.8% 84.4%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4135582 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.93 89.0 7.35e-01 100.0% 65.8%
4187781 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.92 89.0 7.00e-01 100.0% 60.5%
3589952 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.92 88.0 7.36e-01 100.0% 72.4%
1842342 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.92 88.0 6.97e-01 100.0% 60.0%
3587540 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.91 88.0 7.68e-01 100.0% 84.7%
4586448 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.91 88.0 7.42e-01 100.0% 70.8%
1566317 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.90 87.0 7.66e-01 100.0% 78.1%
2879064 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.90 86.0 7.95e-01 100.0% 87.6%
4953572 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.87 83.0 7.90e-01 100.0% 88.9%
3503399 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.86 82.0 7.60e-01 99.2% 94.4%
428579 290.1.1.1 ↗ beta barrels › Sortase › Sortase › Sortase › Sortase 0.83 79.0 7.43e-01 100.0% 89.1%
3447819 4.8.1.6 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot 0.63 28.0 3.58e-01 91.5% 70.0%
3253266 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 33.0 3.47e-01 97.5% 58.1%
4952430 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 47.0 4.91e-01 100.0% 88.2%
4285594 1.1.12.1 ↗ beta barrels › cradle loop barrel › RIFT-related › barrel domain in QueA-like proteins › Queuosine_synth 0.61 38.0 3.78e-01 100.0% 59.2%
4952429 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.61 47.0 5.00e-01 100.0% 96.0%
3263053 1.1.9.20 ↗ beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_4 0.61 35.0 4.30e-01 94.9% 94.3%
4952629 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.60 46.0 4.94e-01 100.0% 96.0%
4934637 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.57 41.0 4.21e-01 94.1% 77.4%
4964533 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.55 43.0 4.08e-01 82.2% 76.4%
4168086 56.1.1.1 ↗ beta sandwiches › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › Epsilon subunit of F1F0-ATP synthase-N › ATP-synt_DE_N 0.55 38.0 4.39e-01 100.0% 97.6%
3253267 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.54 29.0 3.38e-01 97.5% 71.8%
4988096 1.1.13.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.52 45.0 4.63e-01 100.0% 97.4%
3411284 270.1.1.2 ↗ beta barrels › FMT C-terminal domain-like › FMT C-terminal domain-related › FMT C-terminal domain-related › Formyl_trans_C 0.51 38.0 3.98e-01 94.9% 84.5%
3655555 206.1.1.20 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr 0.51 39.0 2.87e-01 83.1% 32.1%