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STL6-S73_scaffold_1_prodigal-single.1__X__X__00246
Bact-VirSTL6-S73_scaffold_1_prodigal-single.1__X__X__00246
Identity
- Kingdom:
- phage
Quality
79.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 6-67
Domain cluster:
rep: MG592462.1__AUR86609.1__NVP1087A_28__00028__D2-60
CATH (60)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gc8B00 | 3.40.1550.10 | Alpha Beta › 3-Layer(aba) Sandwich › Chemotaxis protein chec › CheC-like | 0.74 | 65.0 | 4.71e-01 | 100.0% | 45.4% |
| 3nrnA02 | 3.90.660.50 | Alpha Beta › Alpha-Beta Complex › Polyamine Oxidase; Chain A, domain 2 › | 0.71 | 59.0 | 4.27e-01 | 93.5% | 61.9% |
| 3q8pB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.70 | 59.0 | 5.00e-01 | 96.8% | 61.1% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.70 | 58.0 | 5.08e-01 | 96.8% | 60.4% |
| 4u7cB04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.70 | 59.0 | 4.94e-01 | 96.8% | 56.0% |
| 1n6uA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 53.0 | 4.49e-01 | 100.0% | 50.0% |
| 4lejA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 42.0 | 2.99e-01 | 96.8% | 21.9% |
| 1kfiA04 | 3.30.310.50 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain | 0.67 | 51.0 | 4.21e-01 | 87.1% | 100.0% |
| 6b9tF02 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.66 | 40.0 | 3.33e-01 | 93.5% | 33.9% |
| 2kl5A00 | 3.50.4.20 | Alpha Beta › 3-Layer(bba) Sandwich › Hepatocyte Growth Factor › Uncharacterised protein DUF1027 | 0.66 | 53.0 | 4.46e-01 | 96.8% | 50.9% |
| 1bwvA01 | 3.30.70.150 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RuBisCO large subunit, N-terminal domain | 0.64 | 54.0 | 4.36e-01 | 96.8% | 82.8% |
| 4qd4A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.64 | 41.0 | 2.57e-01 | 75.8% | 11.2% |
| 2jxtA01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.64 | 49.0 | 4.68e-01 | 96.8% | 71.1% |
| 1e25A00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.64 | 46.0 | 3.08e-01 | 79.0% | 18.3% |
| 2o3iA01 | 3.40.1610.10 | Alpha Beta › 3-Layer(aba) Sandwich › CV3147-like fold › CV3147-like domain | 0.64 | 51.0 | 3.51e-01 | 95.2% | 24.2% |
| 2v5yA04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 50.0 | 4.33e-01 | 100.0% | 53.9% |
| 1yqsA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.62 | 40.0 | 2.53e-01 | 72.6% | 11.9% |
| 1w99A02 | 2.60.120.260 | Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like | 0.62 | 54.0 | 3.86e-01 | 100.0% | 54.5% |
| 1qysA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.62 | 46.0 | 4.12e-01 | 95.2% | 55.4% |
| 4pofA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.62 | 44.0 | 4.81e-01 | 96.8% | 94.0% |
| 2z5bB01 | 3.30.230.90 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.62 | 44.0 | 3.56e-01 | 75.8% | 46.2% |
| 2jvfA00 | 3.30.1710.10 | Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein | 0.61 | 45.0 | 4.05e-01 | 95.2% | 54.3% |
| 4e6xB00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.61 | 38.0 | 2.43e-01 | 72.6% | 12.6% |
| 1xf1A05 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 51.0 | 4.37e-01 | 100.0% | 57.4% |
| 4o9gA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.61 | 38.0 | 3.00e-01 | 95.2% | 29.0% |
| 1fyhB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 51.0 | 4.35e-01 | 100.0% | 57.3% |
| 1n26A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 48.0 | 4.04e-01 | 98.4% | 51.4% |
| 1ltlA03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.60 | 42.0 | 4.54e-01 | 96.8% | 93.9% |
| 4d10F01 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.60 | 52.0 | 3.79e-01 | 100.0% | 48.0% |
| 3u5wA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 47.0 | 3.79e-01 | 98.4% | 43.7% |
| 3rjuA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.59 | 42.0 | 2.70e-01 | 79.0% | 93.4% |
| 4ybnB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.59 | 47.0 | 3.25e-01 | 96.8% | 26.3% |
| 3h20A01 | 3.30.1490.240 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RepB DNA-primase, N-terminal domain | 0.59 | 43.0 | 4.23e-01 | 98.4% | 75.8% |
| 4me3A03 | 2.20.28.10 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › | 0.58 | 45.0 | 4.70e-01 | 96.8% | 94.5% |
| 6usmB01 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.58 | 47.0 | 3.73e-01 | 96.8% | 91.8% |
| 2xskA00 | 2.60.40.2420 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.58 | 44.0 | 3.86e-01 | 95.2% | 53.7% |
| 2q0oA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.58 | 42.0 | 3.10e-01 | 77.4% | 49.4% |
| 4n0rA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 40.0 | 3.65e-01 | 93.5% | 52.9% |
| 6kbyA00 | 3.40.710.10 | Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily | 0.58 | 42.0 | 2.64e-01 | 79.0% | 91.7% |
| 2z3gB00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.57 | 45.0 | 3.68e-01 | 100.0% | 43.3% |
| 3cp3A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.57 | 47.0 | 3.75e-01 | 98.4% | 44.9% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.57 | 47.0 | 3.53e-01 | 95.2% | 49.7% |
| 1r9fA01 | 3.30.390.180 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › RNA silencing suppressor P19 | 0.57 | 47.0 | 3.96e-01 | 95.2% | 53.2% |
| 5lvxC02 | 2.60.40.1180 | Mainly Beta › Sandwich › Immunoglobulin-like › Golgi alpha-mannosidase II | 0.56 | 46.0 | 3.90e-01 | 93.5% | 99.1% |
| 1yq5A00 | 2.60.120.670 | Mainly Beta › Sandwich › Jelly Rolls › Minor capsid protein. | 0.56 | 45.0 | 3.44e-01 | 95.2% | 38.2% |
| 3zx7A01 | 2.60.120.980 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 37.0 | 2.81e-01 | 79.0% | 26.4% |
| 2v3sA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 48.0 | 4.23e-01 | 100.0% | 97.9% |
| 2pn5A08 | 2.60.120.1540 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 38.0 | 3.19e-01 | 93.5% | 40.5% |
| 3ihlB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 47.0 | 3.27e-01 | 100.0% | 86.0% |
| 1l3lA01 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.55 | 40.0 | 2.89e-01 | 75.8% | 90.0% |
| 2i44B00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.55 | 47.0 | 3.05e-01 | 100.0% | 88.3% |
| 6l4lA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.55 | 49.0 | 3.87e-01 | 95.2% | 100.0% |
| 6j7cA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.55 | 50.0 | 3.61e-01 | 100.0% | 94.0% |
| 1r0uA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.54 | 45.0 | 3.53e-01 | 95.2% | 87.3% |
| 3f8uB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 43.0 | 3.46e-01 | 90.3% | 81.7% |
| 6vgwA01 | 2.170.16.10 | Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain | 0.53 | 44.0 | 3.38e-01 | 98.4% | 40.4% |
| 4msvA01 | 2.60.120.40 | Mainly Beta › Sandwich › Jelly Rolls › | 0.53 | 44.0 | 3.49e-01 | 96.8% | 67.9% |
| 3fveA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.53 | 47.0 | 3.51e-01 | 100.0% | 99.4% |
| 6mv2A02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.50 | 42.0 | 3.61e-01 | 96.8% | 71.4% |
| 5irbA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.50 | 40.0 | 3.51e-01 | 91.9% | 72.1% |
ECOD (82)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3573883 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.76 | 64.0 | 5.12e-01 | 96.8% | 47.2% |
| 5081134 | 3986.2.1.0 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd | 0.73 | 54.0 | 5.49e-01 | 93.5% | 81.7% |
| 5007155 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.73 | 49.0 | 5.47e-01 | 91.9% | 95.6% |
| 4939739 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.73 | 58.0 | 5.92e-01 | 95.2% | 89.8% |
| 3739303 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.71 | 61.0 | 4.91e-01 | 96.8% | 50.8% |
| 3411558 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.71 | 60.0 | 4.67e-01 | 96.8% | 47.1% |
| 4951473 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.70 | 55.0 | 5.53e-01 | 95.2% | 84.1% |
| 5065436 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.70 | 56.0 | 5.60e-01 | 96.8% | 85.9% |
| 5067865 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.70 | 54.0 | 5.26e-01 | 95.2% | 75.7% |
| 3905094 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.70 | 60.0 | 4.65e-01 | 96.8% | 46.7% |
| 4969863 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.68 | 54.0 | 5.11e-01 | 96.8% | 73.3% |
| 3288892 | 304.163.1.0 ↗ | a+b two layers › Alpha-beta plaits › ATP-binding protein TM_1403 insertion domain › ATP-binding protein TM_1403 insertion domain | 0.67 | 46.0 | 5.06e-01 | 95.2% | 100.0% |
| 3593981 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.67 | 55.0 | 4.71e-01 | 96.8% | 56.2% |
| 4255735 | 101.1.9.98 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF4004 | 0.66 | 46.0 | 3.60e-01 | 95.2% | 35.2% |
| 4020546 | 302.1.1.1 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain › IMS_C | 0.66 | 55.0 | 4.47e-01 | 98.4% | 46.9% |
| 3968768 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.66 | 56.0 | 5.25e-01 | 93.5% | 98.7% |
| 4031235 | 3986.2.1.2 ↗ | a+b two layers › GTP-binding protein lepA C-terminal domain-like › Antitoxin Dmd › Antitoxin Dmd › DUF2922 | 0.65 | 57.0 | 5.46e-01 | 96.8% | 88.6% |
| 4946583 | 302.1.1.0 ↗ | a+b two layers › Reverse ferredoxin › Lesion bypass DNA polymerase (Y-family), little finger domain › Lesion bypass DNA polymerase (Y-family), little finger domain | 0.65 | 53.0 | 4.44e-01 | 96.8% | 51.3% |
| 3514788 | 2492.1.1.0 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like | 0.63 | 54.0 | 3.80e-01 | 100.0% | 67.4% |
| 3917143 | 304.100.1.0 ↗ | a+b two layers › Alpha-beta plaits › PurS-like › PurS-like | 0.63 | 49.0 | 5.04e-01 | 96.8% | 91.7% |
| 3335071 | 109.4.1.1285 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif | 0.63 | 43.0 | 2.47e-01 | 71.0% | 15.4% |
| 4946228 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 48.0 | 3.78e-01 | 80.6% | 80.0% |
| 4942818 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.62 | 53.0 | 4.19e-01 | 100.0% | 72.9% |
| 4945424 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.62 | 45.0 | 3.60e-01 | 79.0% | 81.5% |
| 3175359 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 50.0 | 3.93e-01 | 95.2% | 57.9% |
| 5053865 | 821.1.1.0 ↗ | a+b three layers › GIY-YIG endonuclease › GIY-YIG endonuclease › GIY-YIG endonuclease | 0.60 | 51.0 | 4.59e-01 | 100.0% | 85.6% |
| 3695272 | 221.1.1.93 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF2420 | 0.59 | 43.0 | 3.40e-01 | 96.8% | 36.3% |
| 3696190 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.58 | 51.0 | 4.17e-01 | 100.0% | 91.7% |
| 5029262 | 4114.1.1.0 ↗ | a+b two layers › PHP14-like › PHP14-like › PHP14-like | 0.58 | 51.0 | 4.17e-01 | 100.0% | 63.9% |
| 3516524 | 3680.1.1.1 ↗ | a+b complex topology › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › Zinc finger FYVE domain-containing protein 9 C-terminal domain › SARA_C | 0.58 | 49.0 | 3.82e-01 | 96.8% | 75.2% |
| 3831946 | 109.4.1.1476 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, E_motif | 0.58 | 40.0 | 2.28e-01 | 71.0% | 13.5% |
| 5045308 | 223.1.1.0 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains | 0.58 | 41.0 | 3.07e-01 | 80.6% | 26.7% |
| 3517068 | 3115.1.1.6 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › DUF4494 | 0.58 | 49.0 | 4.88e-01 | 98.4% | 95.4% |
| 4596042 | 223.1.1.7 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › Autoind_bind | 0.58 | 42.0 | 3.08e-01 | 77.4% | 48.8% |
| 3645596 | 109.4.1.1476 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, E_motif | 0.58 | 43.0 | 2.48e-01 | 79.0% | 10.2% |
| 5050481 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.57 | 40.0 | 3.19e-01 | 79.0% | 33.8% |
| 3818971 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.56 | 43.0 | 2.48e-01 | 82.3% | 17.8% |
| 2770740 | 4012.3.1.3 ↗ | a+b two layers › SSHS domain › SSHS domain in CRISPR-associated endonuclease Cas9 › SSHS domain in CRISPR-associated endonuclease Cas9 › Cas9_PI2 | 0.56 | 46.0 | 4.72e-01 | 95.2% | 96.7% |
| 3298909 | 109.4.1.1599 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase | 0.56 | 46.0 | 2.86e-01 | 91.9% | 25.3% |
| 3646564 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.55 | 42.0 | 2.46e-01 | 82.3% | 18.9% |
| 3607139 | 4081.1.1.0 ↗ | beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related | 0.55 | 45.0 | 3.04e-01 | 93.5% | 61.6% |
| 3663499 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.54 | 45.0 | 2.56e-01 | 91.9% | 14.0% |
| 3671718 | 109.4.1.2659 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, DYW_deaminase, E_motif, TPR_24 | 0.54 | 45.0 | 2.53e-01 | 91.9% | 13.7% |
| 3854107 | 207.2.1.92 ↗ | beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Pectin lyase-like › Pectin lyase-like › Amnionless | 0.54 | 43.0 | 3.30e-01 | 93.5% | 53.5% |
| 3678845 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.54 | 44.0 | 2.56e-01 | 91.9% | 15.0% |
| 3802249 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.54 | 45.0 | 2.61e-01 | 91.9% | 17.2% |
| 3444049 | 109.4.1.1285 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif | 0.54 | 44.0 | 2.60e-01 | 91.9% | 17.2% |
| 3354291 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.54 | 44.0 | 2.84e-01 | 91.9% | 30.4% |
| 3420651 | 109.4.1.1521 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, Eplus_motif, E_motif | 0.54 | 44.0 | 2.79e-01 | 91.9% | 27.9% |
| 3328617 | 109.4.1.1992 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.54 | 44.0 | 2.51e-01 | 91.9% | 13.5% |
| 3760983 | 3335.1.1.3 ↗ | beta barrels › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › Handle domain in transferrin-binding protein B › KCTD18_C | 0.54 | 44.0 | 3.88e-01 | 96.8% | 99.0% |
| 3420096 | 109.4.1.1476 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, E_motif | 0.53 | 44.0 | 2.56e-01 | 91.9% | 15.9% |
| 3837823 | 109.4.1.1383 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, Eplus_motif, E_motif | 0.53 | 44.0 | 2.52e-01 | 91.9% | 14.5% |
| 3830169 | 109.4.1.1383 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, Eplus_motif, E_motif | 0.53 | 44.0 | 2.48e-01 | 91.9% | 12.4% |
| 3367891 | 109.4.1.1272 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, E_motif | 0.53 | 36.0 | 2.35e-01 | 72.6% | 14.1% |
| 3357050 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.53 | 44.0 | 2.56e-01 | 91.9% | 16.8% |
| 3443843 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.53 | 43.0 | 2.53e-01 | 91.9% | 16.2% |
| 3807903 | 109.4.1.2208 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif, TPR_24 | 0.53 | 44.0 | 2.52e-01 | 91.9% | 15.4% |
| 3808573 | 109.4.1.3485 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, DYW_deaminase, Eplus_motif, E_motif | 0.53 | 44.0 | 2.67e-01 | 91.9% | 22.9% |
| 3830691 | 109.4.1.2337 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif, TPR_24 | 0.53 | 44.0 | 2.57e-01 | 91.9% | 17.5% |
| 3427946 | 109.4.1.1521 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, Eplus_motif, E_motif | 0.53 | 44.0 | 2.56e-01 | 91.9% | 16.1% |
| 3330921 | 109.4.1.1285 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif | 0.53 | 44.0 | 2.67e-01 | 91.9% | 23.2% |
| 3320698 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.53 | 43.0 | 2.50e-01 | 91.9% | 14.8% |
| 3821185 | 109.4.1.1476 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, E_motif | 0.53 | 43.0 | 2.47e-01 | 91.9% | 14.4% |
| 3385387 | 109.4.1.1521 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, DYW_deaminase, Eplus_motif, E_motif | 0.52 | 43.0 | 2.52e-01 | 91.9% | 16.5% |
| 3677917 | 109.3.1.320 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › DYW_deaminase | 0.52 | 43.0 | 3.39e-01 | 91.9% | 68.9% |
| 3383616 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.52 | 43.0 | 2.48e-01 | 91.9% | 14.7% |
| 3442726 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.52 | 43.0 | 2.44e-01 | 91.9% | 12.9% |
| 3657071 | 109.4.1.2208 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, Eplus_motif, E_motif, TPR_24 | 0.52 | 43.0 | 2.63e-01 | 91.9% | 23.0% |
| 3378740 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.52 | 43.0 | 2.37e-01 | 91.9% | 10.1% |
| 3659725 | 109.4.1.1383 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, Eplus_motif, E_motif | 0.52 | 43.0 | 2.47e-01 | 91.9% | 15.4% |
| 5061168 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 43.0 | 3.18e-01 | 100.0% | 33.2% |
| 3419226 | 109.4.1.3173 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_3, DYW_deaminase, Eplus_motif, E_motif | 0.52 | 42.0 | 2.66e-01 | 91.9% | 27.0% |
| 3802543 | 109.4.1.1267 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase, E_motif | 0.51 | 41.0 | 2.42e-01 | 93.5% | 15.9% |
| 3825377 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.51 | 42.0 | 2.39e-01 | 91.9% | 13.8% |
| 3644933 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.51 | 42.0 | 2.47e-01 | 91.9% | 19.4% |
| 3446121 | 109.4.1.3478 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, DYW_deaminase, Eplus_motif, E_motif, TPR_24 | 0.51 | 43.0 | 2.45e-01 | 91.9% | 11.6% |
| 4857347 | 304.139.2.1 ↗ | a+b two layers › Alpha-beta plaits › Cas7-related › CRISPR-associated protein Cas7f/Csy3 › Cas_Csy3 | 0.51 | 43.0 | 2.84e-01 | 98.4% | 56.7% |
| 3339265 | 109.4.1.1291 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif | 0.51 | 40.0 | 2.35e-01 | 93.5% | 14.0% |
| 3831039 | 109.4.1.1599 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, DYW_deaminase | 0.51 | 41.0 | 2.36e-01 | 93.5% | 11.4% |
| 3683353 | 4004.1.1.5 ↗ | beta sandwiches › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › NAD kinase beta sandwich domain-like › DAGK_acc | 0.50 | 44.0 | 3.40e-01 | 98.4% | 92.3% |
| 3679857 | 109.4.1.2337 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_2, PPR_3, DYW_deaminase, E_motif, TPR_24 | 0.50 | 41.0 | 2.59e-01 | 91.9% | 25.4% |
D2
high
residues 74-202
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3laxA00 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.64 | 38.0 | 4.18e-01 | 75.2% | 71.7% |
| 4f7oA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.53 | 39.0 | 3.21e-01 | 76.0% | 60.4% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3500623 | 375.12.1.1 ↗ | few secondary structure elements › Rubredoxin-like › Nicotinate phosphoribosyltransferase C-terminal domain-related › Nicotinate phosphoribosyltransferase C-terminal domain-related › NAPRTase_C | 0.54 | 44.0 | 4.40e-01 | 85.3% | 96.2% |
| 3275567 | 224.1.1.2 ↗ | a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like › Gelsolin | 0.53 | 31.0 | 3.18e-01 | 81.4% | 57.6% |
| 4928103 | 7510.1.1.1 ↗ | a/b three-layered sandwiches › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Isocitrate/Isopropylmalate dehydrogenase-like › Iso_dh | 0.51 | 42.0 | 3.14e-01 | 89.9% | 54.9% |