←Back to structures
STL6-S73_scaffold_1_prodigal-single.1__X__X__00339
Bact-VirSTL6-S73_scaffold_1_prodigal-single.1__X__X__00339
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 18-67
Domain cluster:
representative
CATH (36)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7ctpA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.77 | 63.0 | 4.72e-01 | 90.0% | 81.7% |
| 1eazA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.76 | 63.0 | 4.95e-01 | 92.0% | 76.7% |
| 1plsA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.75 | 62.0 | 4.75e-01 | 92.0% | 69.0% |
| 2dn6A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.75 | 61.0 | 4.70e-01 | 92.0% | 67.8% |
| 2y7bA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.74 | 61.0 | 4.45e-01 | 92.0% | 78.4% |
| 1gn4A02 | 3.55.40.20 | Alpha Beta › 3-Layer(bab) Sandwich › minor pseudopilin epsh fold › Iron/manganese superoxide dismutase, C-terminal domain | 0.71 | 48.0 | 3.71e-01 | 90.0% | 31.3% |
| 1h10A00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.70 | 56.0 | 4.34e-01 | 92.0% | 71.8% |
| 2rgnB02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.69 | 57.0 | 4.28e-01 | 92.0% | 63.4% |
| 4gzuB03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.69 | 56.0 | 4.67e-01 | 92.0% | 79.1% |
| 2dfkC02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.66 | 54.0 | 3.97e-01 | 92.0% | 62.4% |
| 4iapA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.65 | 52.0 | 4.35e-01 | 92.0% | 79.3% |
| 2cofA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 50.0 | 4.07e-01 | 92.0% | 71.0% |
| 2x4jA01 | 2.30.30.600 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 54.0 | 4.38e-01 | 100.0% | 52.0% |
| 1wgqA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.64 | 51.0 | 4.06e-01 | 92.0% | 70.6% |
| 2eqkA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 53.0 | 4.79e-01 | 100.0% | 76.7% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 52.0 | 4.85e-01 | 100.0% | 75.4% |
| 1x1fA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 48.0 | 3.59e-01 | 92.0% | 52.3% |
| 2coaA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.62 | 48.0 | 3.83e-01 | 92.0% | 83.9% |
| 3mpxA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 48.0 | 4.00e-01 | 92.0% | 73.2% |
| 1w1hD00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 47.0 | 3.56e-01 | 92.0% | 76.6% |
| 2k2jA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 47.0 | 3.71e-01 | 92.0% | 80.3% |
| 3ml4C01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 46.0 | 3.74e-01 | 90.0% | 88.0% |
| 7byjA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.59 | 43.0 | 3.72e-01 | 88.0% | 83.2% |
| 2evrA02 | 3.90.1720.10 | Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) | 0.59 | 48.0 | 3.58e-01 | 100.0% | 46.6% |
| 1mi1A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.58 | 44.0 | 3.58e-01 | 88.0% | 90.5% |
| 5d3xB00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.57 | 43.0 | 3.30e-01 | 90.0% | 62.4% |
| 2xzm600 | 2.20.25.100 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › Ribosomal protein S27 | 0.56 | 43.0 | 3.81e-01 | 90.0% | 67.5% |
| 2d9wA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.55 | 42.0 | 3.43e-01 | 90.0% | 88.2% |
| 4kbxA01 | 2.40.37.30 | Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › | 0.54 | 44.0 | 3.00e-01 | 100.0% | 72.5% |
| 2d7eA01 | 3.40.1440.60 | Alpha Beta › 3-Layer(aba) Sandwich › GIY-YIG endonuclease › PriA, 3(prime) DNA-binding domain | 0.54 | 42.0 | 3.58e-01 | 100.0% | 50.0% |
| 3f6zB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.54 | 42.0 | 3.70e-01 | 88.0% | 97.5% |
| 1mbmA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.53 | 39.0 | 3.63e-01 | 98.0% | 61.1% |
| 5ylyA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.51 | 40.0 | 3.34e-01 | 100.0% | 99.1% |
| 1dgsA02 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.51 | 43.0 | 3.62e-01 | 100.0% | 75.8% |
| 1unnC00 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.50 | 41.0 | 3.33e-01 | 100.0% | 79.3% |
| 1kkeA02 | 2.60.90.20 | Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Virus attachment protein , globular domain | 0.50 | 38.0 | 2.89e-01 | 90.0% | 40.4% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3255028 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.75 | 61.0 | 4.23e-01 | 92.0% | 52.4% |
| 3697281 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.71 | 58.0 | 4.47e-01 | 92.0% | 71.3% |
| 3538471 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.71 | 58.0 | 4.44e-01 | 92.0% | 70.0% |
| 3756645 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.71 | 58.0 | 4.32e-01 | 92.0% | 68.5% |
| 4191831 | 220.1.1.217 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH, GRAM | 0.70 | 57.0 | 3.61e-01 | 92.0% | 30.2% |
| 3507594 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.70 | 57.0 | 4.13e-01 | 92.0% | 75.2% |
| 4000646 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.69 | 56.0 | 4.23e-01 | 92.0% | 74.4% |
| 3940063 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.69 | 56.0 | 4.59e-01 | 92.0% | 76.8% |
| 3789579 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.68 | 56.0 | 4.29e-01 | 92.0% | 80.0% |
| 3702466 | 220.1.1.80 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › RME-8_N | 0.68 | 56.0 | 4.21e-01 | 90.0% | 63.3% |
| 3919667 | 269.1.1.3 ↗ | a+b complex topology › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › Fibrinogen C-terminal domain-like › COLFI | 0.65 | 49.0 | 3.27e-01 | 84.0% | 99.5% |
| 3782601 | 220.1.1.57 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_20 | 0.64 | 51.0 | 3.91e-01 | 92.0% | 72.3% |
| 3924073 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 50.0 | 4.00e-01 | 90.0% | 71.4% |
| 3909061 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.62 | 47.0 | 3.94e-01 | 92.0% | 73.3% |
| 4932434 | 4.1.1.364 ↗ | beta barrels › SH3 › SH3 › SH3 › GatD_N | 0.62 | 47.0 | 4.37e-01 | 90.0% | 71.4% |
| 3938714 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.61 | 49.0 | 3.76e-01 | 92.0% | 61.6% |
| 3927945 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 50.0 | 3.82e-01 | 92.0% | 60.9% |
| 3211867 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.61 | 45.0 | 3.74e-01 | 90.0% | 70.0% |
| 3261192 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.60 | 46.0 | 3.66e-01 | 90.0% | 70.8% |
| 3937468 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.60 | 46.0 | 3.77e-01 | 92.0% | 74.5% |
| 4933308 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.60 | 48.0 | 3.50e-01 | 94.0% | 87.7% |
| 3251948 | 375.1.3.2 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Hypothetical protein MTH1184 › MRNIP | 0.60 | 45.0 | 4.31e-01 | 88.0% | 70.0% |
| 3941316 | 220.1.1.50 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_17 | 0.59 | 46.0 | 3.55e-01 | 90.0% | 82.4% |
| 3262357 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 45.0 | 3.34e-01 | 90.0% | 46.0% |
| 3939093 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.59 | 48.0 | 4.34e-01 | 100.0% | 89.3% |
| 3826272 | 219.1.1.3 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH | 0.58 | 48.0 | 2.99e-01 | 100.0% | 45.1% |
| 3916753 | 220.1.1.1 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH | 0.58 | 45.0 | 3.29e-01 | 90.0% | 52.5% |
| 5067513 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 45.0 | 4.47e-01 | 90.0% | 100.0% |
| 4983682 | 1.1.5.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF447_N | 0.58 | 49.0 | 3.64e-01 | 100.0% | 47.9% |
| 3788003 | 220.1.1.112 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_10 | 0.58 | 44.0 | 3.32e-01 | 90.0% | 66.9% |
| 4027577 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 44.0 | 3.45e-01 | 90.0% | 79.2% |
| 3290662 | 219.1.1.0 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases | 0.57 | 47.0 | 3.62e-01 | 100.0% | 50.0% |
| 3990213 | 220.1.1.7 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS | 0.57 | 44.0 | 3.66e-01 | 92.0% | 74.0% |
| 3214168 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.56 | 42.0 | 3.35e-01 | 90.0% | 64.8% |
| 3308710 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.55 | 38.0 | 3.50e-01 | 72.0% | 92.9% |
| 4182536 | 3518.1.1.1 ↗ | a+b two layers › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › putative RnfG subunit of electron transport complex › FMN_bind | 0.55 | 45.0 | 3.62e-01 | 96.0% | 83.8% |
| 3622643 | 4184.1.1.2 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat › MFP2b | 0.54 | 43.0 | 3.84e-01 | 100.0% | 81.2% |
| 3995153 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.54 | 40.0 | 3.39e-01 | 90.0% | 74.3% |
| 3861490 | 220.1.1.118 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › RHG20_PH | 0.54 | 41.0 | 3.46e-01 | 90.0% | 84.0% |
| 3816110 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.53 | 44.0 | 2.95e-01 | 100.0% | 27.1% |
| 3388697 | 4184.1.1.0 ↗ | beta barrels › MFPT repeat › MFPT repeat › MFPT repeat | 0.53 | 43.0 | 3.86e-01 | 100.0% | 86.3% |
| 4250862 | 4027.1.1.0 ↗ | beta barrels › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit › all-beta domain in DNA topoisomerase IV alpha subunit | 0.52 | 37.0 | 3.80e-01 | 88.0% | 86.7% |
| 3183717 | 5.1.4.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 | 0.52 | 36.0 | 2.16e-01 | 78.0% | 33.1% |