←Back to structures
STL6-S73_scaffold_1_prodigal-single.1__X__X__00354
Bact-VirSTL6-S73_scaffold_1_prodigal-single.1__X__X__00354
Identity
- Kingdom:
- phage
Quality
70.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-151
Domain cluster:
representative
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.73 | 49.0 | 5.48e-01 | 87.2% | 88.9% |
| 1fguB02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.71 | 54.0 | 5.31e-01 | 100.0% | 74.2% |
| 4b08A01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 39.0 | 4.56e-01 | 82.9% | 81.5% |
| 3k7uC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.68 | 46.0 | 5.02e-01 | 87.2% | 83.7% |
| 3u4vA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 50.0 | 5.04e-01 | 100.0% | 78.4% |
| 1xjvA01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.67 | 48.0 | 4.49e-01 | 100.0% | 61.3% |
| 5odnC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 47.0 | 5.01e-01 | 87.2% | 87.3% |
| 4egvA02 | 2.40.50.840 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.61 | 38.0 | 4.49e-01 | 95.7% | 97.3% |
| 3rd4B00 | 2.40.50.660 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.58 | 37.0 | 4.22e-01 | 87.2% | 91.5% |
| 6ro0F00 | 2.40.50.110 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 40.0 | 4.27e-01 | 87.2% | 86.7% |
| 1ae2A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 37.0 | 4.20e-01 | 82.1% | 94.2% |
| 3sojB00 | 3.30.700.10 | Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › Glycoprotein, Type 4 Pilin | 0.53 | 32.0 | 3.24e-01 | 82.1% | 59.1% |
| 2kigA00 | 2.30.29.110 | Mainly Beta › Roll › PH-domain like › | 0.53 | 40.0 | 3.69e-01 | 82.1% | 86.3% |
| 5aj3E01 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.51 | 32.0 | 3.70e-01 | 78.6% | 90.1% |
ECOD (52)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3964458 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 50.0 | 5.57e-01 | 100.0% | 91.1% |
| 3214812 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.72 | 55.0 | 6.02e-01 | 97.4% | 98.9% |
| 3879180 | 2.1.1.170 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SHLD2_OB2 | 0.70 | 56.0 | 5.34e-01 | 100.0% | 73.3% |
| 3880568 | 2.1.1.23 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › POT1 | 0.70 | 50.0 | 4.66e-01 | 100.0% | 60.0% |
| 3882652 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 55.0 | 5.38e-01 | 100.0% | 76.9% |
| 5076488 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 51.0 | 5.53e-01 | 99.1% | 91.0% |
| 3287532 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.69 | 51.0 | 5.50e-01 | 99.1% | 91.0% |
| 4028113 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.68 | 52.0 | 4.95e-01 | 100.0% | 67.9% |
| 3879179 | 2.1.1.169 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SHLD2_OB1 | 0.67 | 53.0 | 4.64e-01 | 100.0% | 56.0% |
| 3412139 | 2.1.1.176 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_MEIOB_N | 0.66 | 57.0 | 5.29e-01 | 100.0% | 75.2% |
| 3330560 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.65 | 52.0 | 4.63e-01 | 100.0% | 61.3% |
| 3366703 | 2.1.1.157 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › CDC24_OB2 | 0.65 | 52.0 | 5.03e-01 | 100.0% | 75.6% |
| 3657702 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 52.0 | 4.89e-01 | 100.0% | 71.4% |
| 4956351 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.64 | 49.0 | 3.27e-01 | 100.0% | 19.8% |
| 2541776 | 2.1.1.6 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › SSB | 0.64 | 47.0 | 4.91e-01 | 87.2% | 82.6% |
| 3661180 | 2.1.1.223 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 | 0.64 | 43.0 | 4.58e-01 | 88.0% | 80.0% |
| 3444970 | 2.1.1.223 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 | 0.63 | 43.0 | 4.17e-01 | 88.0% | 62.3% |
| 3720086 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.63 | 55.0 | 4.89e-01 | 100.0% | 67.1% |
| 3667340 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.62 | 51.0 | 5.06e-01 | 100.0% | 82.4% |
| 3285635 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.62 | 41.0 | 4.44e-01 | 88.0% | 82.1% |
| 3445705 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 37.0 | 4.48e-01 | 97.4% | 100.0% |
| 3666655 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 50.0 | 4.91e-01 | 100.0% | 82.4% |
| 4964647 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.61 | 40.0 | 4.46e-01 | 85.5% | 87.8% |
| 3291641 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 42.0 | 4.61e-01 | 87.2% | 90.5% |
| 3598332 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 53.0 | 4.97e-01 | 100.0% | 79.3% |
| 3643736 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.60 | 53.0 | 4.93e-01 | 95.7% | 92.4% |
| 3826196 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 54.0 | 4.79e-01 | 100.0% | 79.4% |
| 3514098 | 2.1.1.25 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 | 0.60 | 46.0 | 4.67e-01 | 94.0% | 84.3% |
| 3789376 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.59 | 53.0 | 5.14e-01 | 96.6% | 98.5% |
| 3262463 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.59 | 52.0 | 4.94e-01 | 97.4% | 93.6% |
| 3676791 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 37.0 | 4.40e-01 | 70.1% | 100.0% |
| 3219203 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.59 | 53.0 | 5.04e-01 | 97.4% | 97.0% |
| 3961460 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 38.0 | 3.50e-01 | 100.0% | 50.7% |
| 3955464 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 37.0 | 4.16e-01 | 100.0% | 84.4% |
| 3704723 | 2.1.1.25 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_B_exo1 | 0.57 | 46.0 | 4.58e-01 | 94.9% | 82.4% |
| 3736842 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 51.0 | 4.30e-01 | 100.0% | 61.5% |
| 3592676 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 46.0 | 4.58e-01 | 94.9% | 83.2% |
| 3673251 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.57 | 42.0 | 3.68e-01 | 87.2% | 51.4% |
| 3829075 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 47.0 | 4.29e-01 | 90.6% | 90.0% |
| 3590404 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 44.0 | 4.62e-01 | 100.0% | 91.4% |
| 4004698 | 2.1.1.135 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF3592 | 0.57 | 36.0 | 4.27e-01 | 100.0% | 98.7% |
| 4308581 | 220.1.1.168 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 | 0.55 | 39.0 | 3.88e-01 | 72.6% | 96.7% |
| 3738561 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.55 | 43.0 | 4.53e-01 | 98.3% | 94.3% |
| 376 | 2.1.1.20 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Phage_DNA_bind | 0.55 | 37.0 | 4.20e-01 | 82.1% | 93.1% |
| 3678038 | 2.1.1.76 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › REPA_OB_2 | 0.55 | 35.0 | 4.12e-01 | 78.6% | 100.0% |
| 3594762 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.53 | 33.0 | 3.75e-01 | 95.7% | 90.0% |
| 3950370 | 881.4.1.3 ↗ | a+b three layers › Mog1p/PsbP-like › C-terminal domain in sigma-E factor regulatory protein rseB › C-terminal domain in sigma-E factor regulatory protein rseB › DUF4245 | 0.52 | 37.0 | 3.42e-01 | 73.5% | 91.6% |
| 4504110 | 2484.1.1.197 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_B_exo1, DNA_pol_B_exo2 | 0.52 | 42.0 | 2.90e-01 | 87.2% | 37.6% |
| 4050042 | 4.1.1.441 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26332 | 0.52 | 31.0 | 3.61e-01 | 73.5% | 85.0% |
| 3935835 | 2.1.1.68 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RMI1_C | 0.52 | 46.0 | 4.38e-01 | 100.0% | 87.1% |
| 4003463 | 220.1.1.168 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › Tmpp129 | 0.51 | 42.0 | 4.16e-01 | 89.7% | 99.2% |
| 3621723 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.50 | 42.0 | 3.28e-01 | 89.7% | 79.6% |