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STL6-S73_scaffold_1_prodigal-single.1__X__X__00390

Bact-Vir

STL6-S73_scaffold_1_prodigal-single.1__X__X__00390

Identity

Kingdom:
phage

Quality

84.3 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 9-75
PDB
CATH (44)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zpsA01 3.10.20.810 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase 0.71 57.0 5.10e-01 88.1% 94.7%
1ktgA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.69 51.0 4.05e-01 79.1% 66.4%
3gwyB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.69 51.0 4.12e-01 80.6% 66.2%
3hhjB00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.68 50.0 4.04e-01 79.1% 67.2%
1vhzA01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.68 50.0 3.68e-01 79.1% 47.8%
1bmlC03 3.10.20.150 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.67 53.0 4.90e-01 83.6% 96.4%
3eesA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.67 49.0 3.99e-01 79.1% 64.9%
3a6sA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.66 49.0 4.05e-01 80.6% 67.2%
3ng0A01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.66 58.0 5.03e-01 100.0% 88.3%
3f13B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.65 48.0 3.78e-01 79.1% 50.3%
4j7hA02 3.90.79.40 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › EvaA sugar 2,3-dehydratase subunit 0.65 49.0 3.69e-01 80.6% 57.0%
4kyxA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.65 48.0 3.80e-01 79.1% 62.6%
4lniJ01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.65 56.0 4.92e-01 100.0% 89.4%
3sonA00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.65 49.0 3.89e-01 83.6% 64.4%
5zliA01 3.10.20.70 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain 0.64 54.0 4.79e-01 100.0% 88.7%
1vk6A02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.63 46.0 3.76e-01 79.1% 61.8%
3w1yB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.62 48.0 4.12e-01 82.1% 76.0%
1x51A01 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.62 46.0 3.67e-01 80.6% 66.4%
6scxA02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.62 46.0 3.71e-01 80.6% 63.0%
3q91B00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.61 44.0 3.61e-01 77.6% 60.3%
2fkbC00 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.60 47.0 3.61e-01 88.1% 62.9%
6u7tA03 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.59 43.0 3.64e-01 79.1% 66.1%
3rh7A02 3.90.79.10 Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase 0.58 48.0 4.03e-01 100.0% 65.1%
2bw2A01 3.10.20.420 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain 0.57 43.0 4.72e-01 83.6% 100.0%
6zzmA01 3.30.559.10 Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain 0.57 46.0 3.31e-01 95.5% 51.8%
3lq9A00 3.90.470.40 Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › RTP801-like 0.57 51.0 4.08e-01 100.0% 64.1%
5uayA02 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.56 40.0 3.77e-01 76.1% 97.6%
6j09A04 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.56 39.0 3.82e-01 76.1% 98.7%
5ffiE00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.55 38.0 3.40e-01 74.6% 100.0%
1wggA01 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.54 40.0 3.90e-01 79.1% 98.6%
4ifdG01 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 40.0 4.17e-01 100.0% 91.8%
2qdfA03 3.10.20.310 Alpha Beta › Roll › Ubiquitin-like (UB roll) › membrane protein fhac 0.54 38.0 3.71e-01 77.6% 93.5%
1euvB00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.54 39.0 3.75e-01 79.1% 89.9%
2bteA05 3.10.20.590 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.53 38.0 3.98e-01 79.1% 98.4%
3fkaB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 41.0 3.55e-01 92.5% 85.8%
1a70A00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.52 37.0 3.40e-01 79.1% 92.8%
1vkyB01 3.40.1780.10 Alpha Beta › 3-Layer(aba) Sandwich › QueA-like › QueA-like 0.52 38.0 2.86e-01 83.6% 92.7%
1ojqA00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.52 43.0 3.01e-01 91.0% 55.7%
6bu2A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.51 43.0 3.37e-01 95.5% 66.7%
3f8xB00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.51 40.0 3.42e-01 94.0% 78.8%
1gzeA00 3.90.176.10 Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 0.51 43.0 3.04e-01 92.5% 53.1%
2z8lA01 3.10.20.120 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.51 44.0 3.70e-01 98.5% 96.6%
1wx8A00 3.10.20.90 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 0.51 37.0 3.35e-01 80.6% 75.0%
4je3B00 3.10.20.720 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.50 37.0 3.66e-01 85.1% 88.3%
ECOD (52)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3334359 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.71 51.0 3.79e-01 77.6% 48.3%
5011560 239.4.1.0 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain 0.70 59.0 5.12e-01 94.0% 90.5%
3977403 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.70 51.0 4.21e-01 79.1% 62.4%
3784608 221.4.1.7 a+b two layers › beta-Grasp › Nudix › Nudix › MRP-L46 0.69 51.0 3.39e-01 79.1% 83.7%
3258650 239.4.1.0 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain 0.69 60.0 5.78e-01 100.0% 100.0%
4097972 239.2.1.1 beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH 0.68 58.0 4.79e-01 92.5% 78.3%
5039326 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.67 49.0 3.92e-01 79.1% 62.1%
4955866 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.67 56.0 5.09e-01 92.5% 91.1%
4185820 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.67 49.0 4.03e-01 79.1% 62.4%
3509290 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.66 49.0 4.17e-01 79.1% 79.1%
3978281 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.66 49.0 4.01e-01 80.6% 67.7%
4972579 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.66 56.0 4.98e-01 98.5% 91.0%
4995185 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.66 48.0 3.91e-01 79.1% 60.0%
3947875 221.4.1.9 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX_4 0.65 49.0 3.96e-01 80.6% 66.9%
4928255 321.1.1.1 a+b two layers › Glutamine synthetase-like › Glutamine synthetase/guanido kinase › Glutamine synthetase/guanido kinase › Gln-synt_C 0.65 57.0 3.49e-01 100.0% 21.7%
2061904 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.65 48.0 3.61e-01 79.1% 48.5%
2391550 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.65 55.0 4.83e-01 100.0% 89.7%
4459241 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.65 50.0 4.08e-01 83.6% 68.0%
4230721 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.64 53.0 4.83e-01 95.5% 92.6%
4873157 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.64 55.0 4.85e-01 100.0% 84.8%
2557339 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.64 55.0 4.79e-01 100.0% 87.0%
3839359 221.4.1.0 a+b two layers › beta-Grasp › Nudix › Nudix 0.64 48.0 4.11e-01 79.1% 61.9%
3966822 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.63 47.0 3.60e-01 79.1% 51.3%
3734548 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.63 47.0 3.38e-01 79.1% 42.6%
3502554 221.2.1.1 a+b two layers › beta-Grasp › IF3-N › IF3-N › IF3_N 0.62 50.0 5.08e-01 95.5% 93.8%
4375166 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.61 45.0 3.53e-01 80.6% 57.4%
4979080 221.10.1.0 a+b two layers › beta-Grasp › FdhD/NarQ beta-grasp fold domain › FdhD/NarQ beta-grasp fold domain 0.61 47.0 4.65e-01 83.6% 88.6%
3702087 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.60 46.0 4.29e-01 83.6% 80.0%
5035952 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.60 45.0 3.52e-01 83.6% 55.6%
3428938 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 42.0 3.54e-01 76.1% 91.2%
3554834 386.1.1.273 few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zn_SUZ12 0.60 47.0 4.04e-01 88.1% 61.9%
3923967 5001.1.1.1 alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7tm_1 0.59 37.0 2.32e-01 82.1% 12.5%
3490041 4104.1.1.0 beta sandwiches › EscU C-terminal domain-like › EscU C-terminal domain-like › EscU C-terminal domain-like 0.59 53.0 4.37e-01 100.0% 66.7%
3932780 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.58 40.0 3.65e-01 76.1% 52.0%
3397689 243.1.1.91 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF4518 0.58 49.0 3.82e-01 98.5% 75.0%
3404934 221.1.1.52 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › Ubiquitin_2 0.58 44.0 4.02e-01 85.1% 88.3%
3430484 221.4.1.6 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX-like 0.57 48.0 3.59e-01 94.0% 61.2%
4927129 239.4.1.1 beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N 0.57 48.0 4.31e-01 100.0% 92.0%
4459724 221.9.1.1 a+b two layers › beta-Grasp › N-terminal domain of bypass of forespore C, BofC › N-terminal domain of bypass of forespore C, BofC › BOFC_N 0.57 44.0 4.46e-01 83.6% 86.2%
3560295 3118.1.1.1 a+b two layers › C-terminal functional domain of REDD1 › C-terminal functional domain of REDD1 › C-terminal functional domain of REDD1 › RTP801_C 0.56 50.0 4.05e-01 100.0% 66.9%
3813831 226.1.1.16 a+b two layers › POZ domain › POZ domain › POZ domain › Auxin_inducible 0.56 41.0 3.84e-01 79.1% 62.4%
1301858 221.1.1.27 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › YchF-GTPase_C 0.56 40.0 3.47e-01 79.1% 72.8%
3514959 221.4.1.1 a+b two layers › beta-Grasp › Nudix › Nudix › NUDIX 0.56 50.0 3.56e-01 100.0% 53.8%
4939766 7516.1.1.24 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transf_3 0.55 39.0 2.92e-01 100.0% 27.8%
3266401 221.1.1.187 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBL_USP40 0.54 40.0 3.69e-01 83.6% 96.8%
4026056 221.1.1.7 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › UBX 0.53 39.0 3.25e-01 79.1% 80.0%
3694368 221.1.1.2 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ubiquitin 0.53 40.0 3.81e-01 85.1% 90.6%
3929499 221.1.1.36 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › FERM_N 0.53 37.0 3.29e-01 76.1% 86.7%
358014 243.1.1.22 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Lumazine_bd_2 0.52 41.0 3.55e-01 92.5% 85.8%
3281901 243.1.1.26 a+b two layers › Cystatin-like › NTF2-like › NTF2-like › SnoaL_4 0.52 42.0 3.46e-01 98.5% 82.8%
3349329 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.52 45.0 3.78e-01 100.0% 98.3%
3613981 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.51 36.0 3.20e-01 77.6% 73.6%