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STL6-S73_scaffold_1_prodigal-single.1__X__X__00392
Bact-VirSTL6-S73_scaffold_1_prodigal-single.1__X__X__00392
Identity
- Kingdom:
- phage
Quality
83.8
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-69
Domain cluster:
rep: aot2015-NO08_SRR1761682_USA_scaffold_2_curated_prodigal-single.1__X__X__00163__D3-65
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ng0A01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.67 | 57.0 | 5.01e-01 | 100.0% | 85.4% |
| 5zliA01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.66 | 56.0 | 4.89e-01 | 100.0% | 84.0% |
| 4lniJ01 | 3.10.20.70 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Glutamine synthetase, N-terminal domain | 0.66 | 57.0 | 4.93e-01 | 100.0% | 86.5% |
| 3lp5A00 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.63 | 42.0 | 2.86e-01 | 100.0% | 18.4% |
| 3gg6A00 | 3.90.79.10 | Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase | 0.59 | 50.0 | 3.87e-01 | 93.8% | 59.0% |
| 5jzeA00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.59 | 41.0 | 3.12e-01 | 100.0% | 30.2% |
| 3ebyA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 49.0 | 3.81e-01 | 98.5% | 81.0% |
| 2bw2A01 | 3.10.20.420 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Bypass-of-forespore C, N-terminal domain | 0.57 | 43.0 | 4.53e-01 | 86.2% | 96.4% |
| 4bopB00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.57 | 41.0 | 3.17e-01 | 100.0% | 33.3% |
| 2dyoA03 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.56 | 44.0 | 4.06e-01 | 86.2% | 97.6% |
| 3mhzA03 | 3.10.20.110 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.56 | 42.0 | 3.50e-01 | 83.1% | 89.1% |
| 5ah5A01 | 3.10.20.590 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 44.0 | 4.52e-01 | 86.2% | 100.0% |
| 3f9uA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.54 | 45.0 | 3.44e-01 | 90.8% | 89.7% |
| 2pw9C02 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 42.0 | 4.44e-01 | 86.2% | 100.0% |
| 3d22A00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.53 | 44.0 | 3.49e-01 | 90.8% | 75.2% |
| 4dbgA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 40.0 | 3.80e-01 | 86.2% | 95.1% |
| 2lueA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.53 | 40.0 | 3.37e-01 | 84.6% | 71.4% |
| 3iraA00 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 43.0 | 3.18e-01 | 90.8% | 67.4% |
| 2dlxA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 43.0 | 3.58e-01 | 90.8% | 92.9% |
| 6w9rB01 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.52 | 43.0 | 3.33e-01 | 100.0% | 38.4% |
| 3ljsA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 41.0 | 2.62e-01 | 87.7% | 27.2% |
| 3u7zA00 | 2.170.130.30 | Mainly Beta › Beta Complex › Ferric Hydroxamate Uptake Protein; Chain A, domain 1 › | 0.50 | 38.0 | 3.49e-01 | 87.7% | 94.8% |
| 1v5oA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.50 | 38.0 | 3.38e-01 | 84.6% | 74.5% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2557339 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.67 | 58.0 | 4.97e-01 | 100.0% | 83.3% |
| 3973350 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.66 | 57.0 | 4.85e-01 | 98.5% | 90.9% |
| 4230721 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.66 | 56.0 | 5.01e-01 | 98.5% | 91.6% |
| 2391550 | 239.4.1.1 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain › Gln-synt_N | 0.66 | 56.0 | 4.87e-01 | 100.0% | 83.2% |
| 3931740 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.64 | 51.0 | 4.27e-01 | 86.2% | 97.3% |
| 4994326 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.64 | 50.0 | 4.43e-01 | 84.6% | 83.2% |
| 3944218 | 239.4.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Glutamine synthetase, N-terminal domain › Glutamine synthetase, N-terminal domain | 0.64 | 55.0 | 4.71e-01 | 100.0% | 90.9% |
| 3726162 | 221.1.1.24 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ATG5_UblB | 0.63 | 49.0 | 3.91e-01 | 86.2% | 82.6% |
| 3804004 | 221.1.1.237 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › DUF4371 | 0.61 | 47.0 | 4.27e-01 | 84.6% | 93.3% |
| 3224716 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.61 | 48.0 | 4.06e-01 | 87.7% | 88.2% |
| 3211699 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.60 | 46.0 | 3.91e-01 | 87.7% | 82.5% |
| 5073015 | 2485.1.1.15 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredox_DsbH | 0.59 | 45.0 | 3.54e-01 | 100.0% | 40.8% |
| 3797625 | 311.1.1.0 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein | 0.59 | 46.0 | 3.15e-01 | 86.2% | 51.7% |
| 4525510 | 311.1.1.2 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Band_3_cyto | 0.59 | 46.0 | 3.03e-01 | 86.2% | 50.9% |
| 3296466 | 80.1.1.1 ↗ | beta complex topology › HesB-like domain › HesB-like domain › HesB-like domain › Fe-S_biosyn | 0.58 | 37.0 | 3.31e-01 | 80.0% | 42.0% |
| 4497524 | 221.1.1.24 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › ATG5_UblB | 0.58 | 46.0 | 3.89e-01 | 87.7% | 96.5% |
| 3576524 | 311.1.1.2 ↗ | a+b three layers › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Phoshotransferase/anion transport protein › Band_3_cyto | 0.58 | 45.0 | 3.38e-01 | 86.2% | 72.9% |
| 3409748 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.58 | 43.0 | 3.56e-01 | 81.5% | 45.8% |
| 3610213 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 44.0 | 3.56e-01 | 87.7% | 87.1% |
| 3242250 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.57 | 44.0 | 3.77e-01 | 87.7% | 86.0% |
| 3743318 | 2006.1.1.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like | 0.57 | 49.0 | 3.48e-01 | 100.0% | 31.4% |
| 3497113 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.57 | 45.0 | 3.33e-01 | 100.0% | 34.4% |
| 4343568 | 239.1.1.6 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like › tRNA-synt_1c_C2 | 0.56 | 47.0 | 4.66e-01 | 93.8% | 90.0% |
| 4175683 | 221.1.1.191 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › WDCP | 0.56 | 43.0 | 4.04e-01 | 86.2% | 90.6% |
| 4470334 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.56 | 44.0 | 4.55e-01 | 86.2% | 96.8% |
| 3460032 | 2485.1.1.55 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › FAF1 | 0.55 | 46.0 | 3.46e-01 | 90.8% | 74.7% |
| 4417871 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.55 | 44.0 | 4.47e-01 | 86.2% | 96.8% |
| 4473508 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.54 | 43.0 | 4.35e-01 | 84.6% | 95.2% |
| 4020848 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.54 | 45.0 | 3.44e-01 | 90.8% | 76.7% |
| 3526186 | 2484.1.1.204 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › PF27046, PF27073 | 0.54 | 44.0 | 2.71e-01 | 95.4% | 79.2% |
| 3265336 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.54 | 42.0 | 3.55e-01 | 84.6% | 70.0% |
| 4946264 | 323.1.1.1 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › 2-oxoacid_dh | 0.54 | 44.0 | 3.06e-01 | 96.9% | 58.5% |
| 4491860 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.54 | 43.0 | 4.36e-01 | 86.2% | 96.8% |
| 5036202 | 7516.1.1.1 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › NTP_transferase | 0.53 | 47.0 | 3.28e-01 | 100.0% | 34.4% |
| 3342385 | 60.1.1.0 ↗ | beta barrels › SPOC domain-like › SPOC domain-related › SPOC domain | 0.53 | 40.0 | 3.15e-01 | 83.1% | 98.7% |
| 4121213 | 221.15.1.0 ↗ | a+b two layers › beta-Grasp › beta-grasp fold domain in leucine-tRNA ligase › beta-grasp fold domain in leucine-tRNA ligase | 0.53 | 41.0 | 4.23e-01 | 86.2% | 96.8% |
| 4029228 | 192.2.1.2 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin | 0.52 | 35.0 | 2.61e-01 | 72.3% | 29.5% |
| 3404763 | 226.1.1.1 ↗ | a+b two layers › POZ domain › POZ domain › POZ domain › BTB | 0.52 | 38.0 | 3.32e-01 | 90.8% | 48.6% |
| 3620089 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 40.0 | 3.40e-01 | 86.2% | 67.3% |
| 4014836 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 40.0 | 3.79e-01 | 90.8% | 96.5% |
| 3457365 | 221.1.1.0 ↗ | a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like | 0.51 | 37.0 | 3.32e-01 | 84.6% | 81.8% |
| 3512236 | 219.1.1.48 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Peptidase_C65 | 0.51 | 35.0 | 2.69e-01 | 100.0% | 29.4% |
| 3537025 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.50 | 40.0 | 2.44e-01 | 95.4% | 77.7% |
| 3759277 | 2485.1.1.0 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like | 0.50 | 42.0 | 3.25e-01 | 92.3% | 89.5% |
| 3244782 | 109.27.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › BACK domain › BACK domain | 0.50 | 31.0 | 2.40e-01 | 81.5% | 22.9% |