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SWI_SNF2_family_helicase
Euk-VirAnopheles_minimus_iridovirus
SWI_SNF2_family_helicase__YP_009021162__Anopheles_minimus_iridovirus__1465751
Identity
- Accession:
- YP_009021162 ↗
- Protein ID:
- SWI_SNF2_family_helicase
- Kingdom:
- euk
Quality
71.8
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Chloriridovirus›
Chloriridovirus_anopheles1
TaxID: 1465751
Cluster
View cluster (26 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 263-284_357-528
Domain cluster:
rep: CP025712.1__AUO37541.1__YDC107_5424__00064__D413-546_602-643
D2
high
residues 834-950
Domain cluster:
rep: SWI_SNF2_family_helicase__YP_010087923__Lymphocystis_disease_virus_4__2704413__D840-928
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fhnA05 | 1.10.10.2270 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Dsl1p vesicle tethering complex, Tip20p subunit, domain E | 0.65 | 25.0 | 3.25e-01 | 96.6% | 59.7% |
| 1h1oA01 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.64 | 29.0 | 3.55e-01 | 94.9% | 65.3% |
| 2lfhA00 | 4.10.280.10 | Few Secondary Structures › Irregular › MYOD Basic-Helix-Loop-Helix Domain, subunit B › Helix-loop-helix DNA-binding domain | 0.55 | 30.0 | 3.78e-01 | 82.9% | 89.7% |
| 3hv0A02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.52 | 37.0 | 3.81e-01 | 99.1% | 76.8% |
| 2m4eA00 | 1.20.120.1930 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Uncharacterised protein PF16691 family | 0.50 | 34.0 | 3.89e-01 | 95.7% | 93.0% |
D3
medium
residues 285-356
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2w43A02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 40.0 | 4.42e-01 | 98.6% | 87.7% |
| 1hp8A00 | 1.10.287.1130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › CytochromE C oxidase copper chaperone | 0.52 | 34.0 | 3.56e-01 | 100.0% | 72.1% |
ECOD (7)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3928877 | 101.1.15.1 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › MOZ_SAS | 0.64 | 39.0 | 3.64e-01 | 100.0% | 48.9% |
| 5030872 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 38.0 | 3.17e-01 | 100.0% | 34.6% |
| 5040538 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 35.0 | 3.39e-01 | 79.2% | 52.4% |
| 3956684 | 1075.1.2.0 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain | 0.55 | 46.0 | 3.57e-01 | 94.4% | 77.6% |
| 3279300 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.51 | 43.0 | 3.41e-01 | 97.2% | 66.3% |
| 3853979 | 101.1.2.573 ↗ | alpha arrays › HTH › HTH › winged helix domain › NPHP3_hel | 0.50 | 37.0 | 3.16e-01 | 80.6% | 94.6% |
| 3252480 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.50 | 43.0 | 3.96e-01 | 94.4% | 84.2% |
D4
medium
residues 677-697_738-826