SWI_SNF2_family_helicase

Euk-Vir

Lymphocystis_disease_virus_4

SWI_SNF2_family_helicase__YP_010087923__Lymphocystis_disease_virus_4__2704413

Identity

71.4 mean pLDDT

Bamfordvirae› Nucleocytoviricota› Megaviricetes› Pimascovirales› Iridoviridae› Lymphocystivirus› Lymphocystis_disease_virus_4

TaxID: 2704413

View cluster (26 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 596-679

PDB

D2 high residues 840-928

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1fafA00	1.10.287.110	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain	0.62	27.0	2.90e-01	84.3%	44.3%
3vygE00	1.10.472.20	Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Nitrile hydratase, beta subunit	0.58	41.0	3.47e-01	73.0%	51.7%
3qmvB00	3.40.50.1820	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain	0.51	40.0	2.94e-01	86.5%	50.4%
1e7uA05	1.10.1070.11	Mainly Alpha › Orthogonal Bundle › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, Domain 5 › Phosphatidylinositol 3-/4-kinase, catalytic domain	0.51	37.0	2.96e-01	96.6%	36.6%
2hkvA01	1.20.120.450	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain	0.51	42.0	3.62e-01	91.0%	90.8%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3939205	3729.1.1.0 ↗	alpha arrays › Legumain prodomain › Legumain prodomain › Legumain prodomain	0.52	32.0	2.78e-01	88.8%	38.5%
3585742	102.1.2.18 ↗	alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › OGG_N	0.50	43.0	3.14e-01	95.5%	86.6%
4015974	148.1.3.14 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › ORC4_C	0.50	31.0	2.84e-01	79.8%	41.5%

D3 medium residues 43-271_524-580

PDB

Domain cluster: rep: SWI_SNF2_family_helicase_protein__YP_009342180__Lymphocystis_disease_virus_Sa__1898060__D47-271_530-554

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00176.30 best	SNF2-rel_dom	42.7	5.30e-11	89.2%	61.1%
PF04851.22	ResIII	50.5	3.20e-13	59.8%	84.2%
PF00270.36	DEAD	25.6	1.30e-05	59.8%	87.4%

D4 medium residues 272-360_510-523

PDB

Domain cluster: representative

D5 medium residues 361-509

PDB

Domain cluster: rep: CP025712.1__AUO37541.1__YDC107_5424__00064__D413-546_602-643

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF00271.38 best	Helicase_C	37.1	4.40e-09	85.2%	97.3%

D6 medium residues 684-741

PDB