←Back to structures
S_p1_S3_coassembly_k141_2031891_prodigal-single.1__X__X__00094
Bact-VirS_p1_S3_coassembly_k141_2031891_prodigal-single.1__X__X__00094
Identity
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-90
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2zetC00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.69 | 35.0 | 2.91e-01 | 73.3% | 29.8% |
| 1vb5A01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.64 | 46.0 | 4.52e-01 | 76.7% | 92.6% |
| 3jckC00 | 1.25.40.570 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.58 | 46.0 | 3.04e-01 | 87.2% | 31.5% |
| 3pvuA02 | 1.10.167.10 | Mainly Alpha › Orthogonal Bundle › Regulator of G-protein Signalling 4; domain 2 › Regulator of G-protein Signalling 4, domain 2 | 0.57 | 38.0 | 3.97e-01 | 76.7% | 75.0% |
| 4xxbB00 | 2.30.30.380 | Mainly Beta › Roll › SH3 type barrels. › Zn-finger domain of Sec23/24 | 0.57 | 25.0 | 3.24e-01 | 75.6% | 73.8% |
| 3qwwA03 | 1.25.40.10 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain | 0.57 | 44.0 | 3.50e-01 | 87.2% | 59.7% |
| 3abzA01 | 3.20.20.300 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase, family 3, N-terminal domain | 0.52 | 44.0 | 3.05e-01 | 98.8% | 49.1% |
| 1zwxA00 | 3.60.10.10 | Alpha Beta › 4-Layer Sandwich › Deoxyribonuclease I; Chain A › Endonuclease/exonuclease/phosphatase | 0.52 | 42.0 | 2.91e-01 | 88.4% | 63.5% |
| 6y9tB01 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.51 | 41.0 | 2.72e-01 | 91.9% | 40.6% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3742090 | 109.4.1.17 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin | 0.58 | 51.0 | 3.41e-01 | 100.0% | 49.3% |
| 3628258 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.55 | 43.0 | 3.54e-01 | 84.9% | 87.2% |
| 4454725 | 141.1.1.8 ↗ | alpha bundles › Terpenoid synthases › Terpenoid synthases › Terpenoid synthases › Terpene_syn_C_2 | 0.54 | 38.0 | 2.66e-01 | 73.3% | 55.9% |
| None | — | 0.54 | 46.0 | 2.96e-01 | 94.2% | 28.9% |