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S_p1_S3_coassembly_k141_2031891_prodigal-single.1__X__X__00100
Bact-VirS_p1_S3_coassembly_k141_2031891_prodigal-single.1__X__X__00100
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-73
Domain cluster:
rep: MN813676.1__QHB36637.1__SEA_ADOLIN_55__00055__D3-67
CATH (39)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ej9A02 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.89 | 56.0 | 6.75e-01 | 87.7% | 95.9% |
| 1kq1H00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.87 | 65.0 | 6.81e-01 | 98.6% | 86.4% |
| 1u1sA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 63.0 | 6.62e-01 | 98.6% | 84.8% |
| 3hfnA00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 63.0 | 6.85e-01 | 98.6% | 93.3% |
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.79 | 65.0 | 6.52e-01 | 98.6% | 86.5% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 61.0 | 5.91e-01 | 98.6% | 77.1% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 61.0 | 6.00e-01 | 100.0% | 84.4% |
| 3fb9B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 60.0 | 5.72e-01 | 100.0% | 79.8% |
| 6v4xC01 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.71 | 63.0 | 5.62e-01 | 100.0% | 70.0% |
| 2e12A00 | 2.30.30.720 | Mainly Beta › Roll › SH3 type barrels. › Protein of unknown function (DUF3247) | 0.71 | 65.0 | 5.99e-01 | 100.0% | 78.5% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 48.0 | 4.91e-01 | 100.0% | 73.9% |
| 2fb7A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 51.0 | 4.97e-01 | 80.8% | 82.5% |
| 3h8zA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 42.0 | 4.90e-01 | 86.3% | 97.9% |
| 1f39A00 | 2.10.109.10 | Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A | 0.66 | 44.0 | 3.99e-01 | 91.8% | 49.5% |
| 2eqmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 44.0 | 4.95e-01 | 84.9% | 96.2% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 45.0 | 4.92e-01 | 94.5% | 91.5% |
| 2e6nA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 45.0 | 4.07e-01 | 100.0% | 51.9% |
| 2qi2A01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.64 | 51.0 | 4.60e-01 | 100.0% | 62.5% |
| 6my0A02 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 42.0 | 4.43e-01 | 89.0% | 76.9% |
| 1wgsA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 48.0 | 4.00e-01 | 100.0% | 45.9% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.63 | 50.0 | 3.66e-01 | 100.0% | 32.2% |
| 3obyA01 | 2.30.30.870 | Mainly Beta › Roll › SH3 type barrels. › Pelota, domain A | 0.62 | 48.0 | 4.32e-01 | 100.0% | 58.7% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.62 | 49.0 | 4.96e-01 | 98.6% | 88.9% |
| 7cfdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 43.0 | 4.34e-01 | 97.3% | 74.0% |
| 2jrbA00 | 3.30.250.20 | Alpha Beta › 2-Layer Sandwich › Rec A Protein; domain 2 › L1 transposable element, C-terminal domain | 0.61 | 39.0 | 4.05e-01 | 100.0% | 72.3% |
| 4a4kA02 | 2.30.30.1160 | Mainly Beta › Roll › SH3 type barrels. › | 0.59 | 52.0 | 4.29e-01 | 98.6% | 67.7% |
| 2xfmA00 | 2.170.260.10 | Mainly Beta › Beta Complex › paz domain › paz domain | 0.58 | 50.0 | 4.35e-01 | 100.0% | 93.3% |
| 1jb0E00 | 2.30.30.50 | Mainly Beta › Roll › SH3 type barrels. › | 0.58 | 47.0 | 4.80e-01 | 90.4% | 97.1% |
| 1y71A00 | 2.30.30.430 | Mainly Beta › Roll › SH3 type barrels. › Kinase associated protein B domain | 0.58 | 45.0 | 3.99e-01 | 94.5% | 56.9% |
| 3r5xD02 | 3.30.470.20 | Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain | 0.56 | 38.0 | 2.99e-01 | 89.0% | 32.9% |
| 2hqvA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.56 | 49.0 | 3.77e-01 | 100.0% | 52.9% |
| 2oviA00 | 3.40.1570.10 | Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › HemS/ChuS/ChuX like domains | 0.56 | 48.0 | 3.84e-01 | 100.0% | 57.6% |
| 2re7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 48.0 | 4.03e-01 | 100.0% | 93.9% |
| 1whjA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.55 | 47.0 | 4.26e-01 | 98.6% | 74.5% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 46.0 | 3.78e-01 | 100.0% | 97.9% |
| 1cmjA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.53 | 44.0 | 2.83e-01 | 94.5% | 95.7% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.53 | 32.0 | 3.44e-01 | 87.7% | 75.4% |
| 2xbkA00 | 1.10.630.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 | 0.52 | 43.0 | 2.78e-01 | 94.5% | 94.6% |
| 1uqwA02 | 3.90.76.10 | Alpha Beta › Alpha-Beta Complex › Dipeptide-binding Protein; domain 1 › Dipeptide-binding Protein; Domain 1 | 0.51 | 36.0 | 2.93e-01 | 75.3% | 66.4% |
ECOD (67)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 135648 | 4.1.1.142 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq_1 | 0.89 | 67.0 | 7.15e-01 | 98.6% | 89.2% |
| 4359892 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.88 | 66.0 | 6.39e-01 | 98.6% | 71.2% |
| 1263519 | 4.1.1.96 ↗ | beta barrels › SH3 › SH3 › SH3 › Hfq | 0.87 | 65.0 | 7.03e-01 | 98.6% | 91.9% |
| 3290160 | 4.1.1.323 ↗ | beta barrels › SH3 › SH3 › SH3 › WYL | 0.85 | 71.0 | 6.88e-01 | 100.0% | 80.0% |
| 3036710 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.85 | 64.0 | 6.81e-01 | 98.6% | 90.5% |
| 4034320 | 4.1.1.398 ↗ | beta barrels › SH3 › SH3 › SH3 › YolD | 0.84 | 69.0 | 7.18e-01 | 97.3% | 92.6% |
| 4380345 | 4.1.1.257 ↗ | beta barrels › SH3 › SH3 › SH3 › Flag1_repress | 0.84 | 65.0 | 6.12e-01 | 94.5% | 69.4% |
| 5053906 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.84 | 59.0 | 6.45e-01 | 93.2% | 88.3% |
| 3328647 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.83 | 65.0 | 6.14e-01 | 97.3% | 70.6% |
| 3821778 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 54.0 | 6.37e-01 | 87.7% | 100.0% |
| 3173156 | 4.1.1.344 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31193 | 0.80 | 62.0 | 6.00e-01 | 93.2% | 73.8% |
| 3232582 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 65.0 | 5.91e-01 | 100.0% | 68.4% |
| 4041343 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.77 | 48.0 | 5.64e-01 | 76.7% | 92.0% |
| 3721787 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.76 | 71.0 | 6.69e-01 | 98.6% | 87.1% |
| 4971470 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.76 | 60.0 | 5.98e-01 | 100.0% | 81.3% |
| 5050320 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.75 | 59.0 | 5.90e-01 | 100.0% | 81.3% |
| 4387099 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.75 | 67.0 | 6.54e-01 | 98.6% | 90.0% |
| 3389662 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.74 | 59.0 | 5.74e-01 | 94.5% | 77.5% |
| 4948433 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.74 | 58.0 | 6.04e-01 | 100.0% | 89.7% |
| 5081442 | 4.17.1.1 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › GatD_N | 0.73 | 57.0 | 5.88e-01 | 100.0% | 87.1% |
| 3786412 | 4.1.1.344 ↗ | beta barrels › SH3 › SH3 › SH3 › PF31193 | 0.73 | 63.0 | 6.13e-01 | 97.3% | 85.0% |
| 3936053 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.72 | 60.0 | 6.12e-01 | 98.6% | 92.9% |
| 3684460 | 4.1.1.219 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM12_LSM | 0.72 | 62.0 | 5.64e-01 | 93.2% | 89.5% |
| 3190835 | 4.1.1.286 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF7072 | 0.71 | 54.0 | 5.22e-01 | 100.0% | 71.8% |
| 3254881 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 64.0 | 6.42e-01 | 98.6% | 97.3% |
| 3592467 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 62.0 | 6.21e-01 | 97.3% | 93.3% |
| 4944045 | 4.17.1.2 ↗ | beta barrels › SH3 › GatD N-terminal domain-like › GatD N-terminal domain-like › Asparaginase | 0.70 | 55.0 | 5.66e-01 | 100.0% | 88.6% |
| 3673944 | 4.1.1.51 ↗ | beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor | 0.70 | 55.0 | 4.41e-01 | 100.0% | 43.0% |
| 4013487 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 63.0 | 5.41e-01 | 98.6% | 72.7% |
| 3740204 | 4.1.1.71 ↗ | beta barrels › SH3 › SH3 › SH3 › Gemin7 | 0.68 | 57.0 | 5.48e-01 | 98.6% | 78.8% |
| 3701868 | 4.1.1.19 ↗ | beta barrels › SH3 › SH3 › SH3 › LSM | 0.68 | 61.0 | 5.65e-01 | 98.6% | 78.9% |
| 3511375 | 4.1.1.349 ↗ | beta barrels › SH3 › SH3 › SH3 › ROF | 0.68 | 56.0 | 5.31e-01 | 100.0% | 76.5% |
| 3730011 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.68 | 60.0 | 4.87e-01 | 100.0% | 52.9% |
| 3817335 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 45.0 | 3.00e-01 | 90.4% | 18.0% |
| 2727964 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.64 | 46.0 | 5.02e-01 | 94.5% | 93.2% |
| 3407855 | 4.1.1.9 ↗ | beta barrels › SH3 › SH3 › SH3 › TUDOR | 0.64 | 45.0 | 4.26e-01 | 97.3% | 60.0% |
| 5032809 | 4.11.1.0 ↗ | beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase | 0.64 | 48.0 | 4.06e-01 | 100.0% | 46.2% |
| 4417145 | 1.1.5.26 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZN | 0.64 | 58.0 | 4.97e-01 | 100.0% | 89.6% |
| 3257607 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.64 | 54.0 | 5.38e-01 | 98.6% | 92.0% |
| 3675653 | 4.1.1.239 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O | 0.63 | 54.0 | 5.43e-01 | 98.6% | 94.7% |
| 4161673 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.63 | 45.0 | 4.31e-01 | 94.5% | 64.7% |
| 3097036 | 4.1.1.299 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW, KOW1_SPT5 | 0.62 | 52.0 | 4.55e-01 | 93.2% | 88.5% |
| 3761319 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.62 | 49.0 | 5.12e-01 | 90.4% | 98.5% |
| 3501337 | 4.1.1.169 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4819 | 0.62 | 54.0 | 5.33e-01 | 100.0% | 93.8% |
| 3594413 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.61 | 51.0 | 5.03e-01 | 95.9% | 91.3% |
| 2978978 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.61 | 50.0 | 4.96e-01 | 93.2% | 88.0% |
| 3888395 | 4.1.1.18 ↗ | beta barrels › SH3 › SH3 › SH3 › CAP_GLY | 0.60 | 52.0 | 5.01e-01 | 98.6% | 95.2% |
| 3397845 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 49.0 | 4.37e-01 | 97.3% | 63.8% |
| 4581369 | 4.1.1.166 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2314 | 0.59 | 52.0 | 4.62e-01 | 100.0% | 81.0% |
| 3481048 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 46.0 | 4.20e-01 | 97.3% | 63.0% |
| 4523548 | 4.8.1.35 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › DUF1292 | 0.59 | 48.0 | 4.57e-01 | 90.4% | 78.8% |
| 4622062 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.59 | 51.0 | 3.64e-01 | 100.0% | 36.2% |
| 3848399 | 4.8.1.24 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Chromo_MORC2_6th | 0.58 | 45.0 | 4.59e-01 | 93.2% | 88.6% |
| 4004815 | 4.1.1.166 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF2314 | 0.58 | 51.0 | 4.32e-01 | 100.0% | 61.0% |
| 3680900 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.58 | 46.0 | 4.01e-01 | 90.4% | 75.0% |
| 3812766 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.58 | 47.0 | 4.79e-01 | 94.5% | 95.7% |
| 4865228 | 314.1.1.3 ↗ | a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › tRNA-synt_2d | 0.57 | 42.0 | 3.85e-01 | 86.3% | 58.8% |
| 3625263 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 48.0 | 4.32e-01 | 94.5% | 69.0% |
| 7765 | 4216.1.1.2 ↗ | a+b duplicates or obligate multimers › Heme iron utilization protein-like › Heme iron utilization protein-like › Heme iron utilization protein-like › ChuX_HutX | 0.56 | 49.0 | 4.15e-01 | 100.0% | 72.2% |
| 3972526 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 43.0 | 4.38e-01 | 82.2% | 85.7% |
| 3347865 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.56 | 45.0 | 3.95e-01 | 93.2% | 71.7% |
| 3647116 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.54 | 42.0 | 3.66e-01 | 89.0% | 71.2% |
| 3370313 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.54 | 44.0 | 3.49e-01 | 93.2% | 56.4% |
| 3658750 | 220.1.1.78 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_2 | 0.54 | 43.0 | 3.76e-01 | 93.2% | 74.4% |
| 4024862 | 708.1.2.11 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › STEEP1 | 0.53 | 38.0 | 3.39e-01 | 79.5% | 86.1% |
| 3339163 | 4.1.1.302 ↗ | beta barrels › SH3 › SH3 › SH3 › tSH3-B_UBE2O | 0.51 | 45.0 | 4.30e-01 | 98.6% | 97.6% |
| 3220341 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 37.0 | 2.68e-01 | 78.1% | 93.5% |