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S_p1_S3_coassembly_k141_2031891_prodigal-single.1__X__X__00135
Bact-VirS_p1_S3_coassembly_k141_2031891_prodigal-single.1__X__X__00135
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 34-110
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1dgsA05 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.92 | 79.0 | 8.33e-01 | 94.8% | 100.0% |
| 3s6iA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.59 | 49.0 | 4.32e-01 | 92.2% | 64.7% |
| 1ornA01 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.58 | 49.0 | 4.39e-01 | 96.1% | 67.0% |
| 2xubA02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 45.0 | 4.31e-01 | 100.0% | 78.3% |
| 3w6bB00 | 1.10.530.10 | Mainly Alpha › Orthogonal Bundle › Lysozyme › | 0.54 | 40.0 | 3.38e-01 | 84.4% | 94.1% |
| 5u9nB00 | 1.20.920.10 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like | 0.54 | 44.0 | 3.87e-01 | 92.2% | 85.0% |
| 1ki1B01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.54 | 40.0 | 3.11e-01 | 84.4% | 68.3% |
| 3umoA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 44.0 | 3.00e-01 | 100.0% | 91.6% |
| 4nlbA02 | 1.10.150.80 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › HRDC domain | 0.51 | 44.0 | 4.16e-01 | 100.0% | 90.4% |
ECOD (96)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4248263 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.96 | 88.0 | 6.28e-01 | 100.0% | 38.4% |
| 4176415 | 102.1.1.81 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 | 0.96 | 87.0 | 6.36e-01 | 100.0% | 40.6% |
| 4965276 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.96 | 87.0 | 6.23e-01 | 100.0% | 38.4% |
| 4302460 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.95 | 87.0 | 6.44e-01 | 100.0% | 42.9% |
| 4280852 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.95 | 91.0 | 6.49e-01 | 100.0% | 45.1% |
| 4063648 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.95 | 87.0 | 6.48e-01 | 100.0% | 44.2% |
| 4179566 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.95 | 91.0 | 6.59e-01 | 100.0% | 45.4% |
| 4270141 | 102.1.1.82 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_5 | 0.95 | 86.0 | 7.35e-01 | 100.0% | 63.5% |
| 4527845 | 102.1.1.104 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, HHH_2, HHH_5 | 0.95 | 87.0 | 6.35e-01 | 100.0% | 41.7% |
| 4038838 | 102.1.1.104 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, HHH_2, HHH_5 | 0.95 | 86.0 | 6.38e-01 | 100.0% | 42.9% |
| 4072463 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.95 | 86.0 | 6.43e-01 | 100.0% | 44.2% |
| 4325772 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.95 | 86.0 | 6.00e-01 | 100.0% | 34.8% |
| 4602504 | 102.1.1.99 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2 | 0.95 | 86.0 | 6.21e-01 | 100.0% | 39.5% |
| 4266559 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.95 | 86.0 | 7.87e-01 | 100.0% | 76.8% |
| 4414670 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.95 | 86.0 | 5.56e-01 | 100.0% | 25.6% |
| 4122857 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.95 | 86.0 | 6.36e-01 | 100.0% | 42.9% |
| 4153664 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.95 | 86.0 | 7.70e-01 | 100.0% | 73.0% |
| 4318949 | 102.1.1.81 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 | 0.95 | 86.0 | 6.25e-01 | 100.0% | 40.6% |
| 4574629 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.94 | 85.0 | 6.40e-01 | 100.0% | 44.2% |
| 4679202 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.94 | 85.0 | 6.13e-01 | 100.0% | 38.4% |
| 4551030 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.94 | 85.0 | 6.39e-01 | 100.0% | 44.2% |
| 4085490 | 102.1.1.104 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, HHH_2, HHH_5 | 0.94 | 85.0 | 6.23e-01 | 100.0% | 40.6% |
| 4098561 | 102.1.1.96 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2, HHH_5 | 0.94 | 85.0 | 6.12e-01 | 100.0% | 38.4% |
| 3968018 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.94 | 85.0 | 8.67e-01 | 100.0% | 97.3% |
| 4253823 | 102.1.1.81 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 | 0.94 | 85.0 | 5.50e-01 | 100.0% | 25.2% |
| 4258230 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.94 | 85.0 | 5.52e-01 | 100.0% | 25.6% |
| 4110087 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.94 | 85.0 | 6.16e-01 | 100.0% | 39.5% |
| 4336808 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.94 | 85.0 | 6.26e-01 | 100.0% | 41.7% |
| 4051001 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.94 | 85.0 | 6.20e-01 | 100.0% | 40.6% |
| 4035758 | 102.1.1.96 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2, HHH_5 | 0.94 | 85.0 | 6.10e-01 | 100.0% | 38.4% |
| 4066899 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.94 | 85.0 | 6.19e-01 | 100.0% | 40.6% |
| 4350136 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.94 | 85.0 | 5.47e-01 | 100.0% | 25.2% |
| 4370137 | 102.1.1.96 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2, HHH_5 | 0.94 | 84.0 | 6.18e-01 | 100.0% | 40.6% |
| 4128729 | 102.1.1.96 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2, HHH_5 | 0.94 | 85.0 | 6.18e-01 | 100.0% | 40.6% |
| 4292069 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.94 | 84.0 | 6.17e-01 | 100.0% | 40.6% |
| 4659414 | 102.1.1.81 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 | 0.93 | 84.0 | 6.16e-01 | 100.0% | 40.6% |
| 4512339 | 102.1.1.99 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2 | 0.93 | 84.0 | 6.16e-01 | 100.0% | 40.6% |
| 3837946 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.93 | 84.0 | 6.17e-01 | 100.0% | 40.6% |
| 4346610 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.93 | 84.0 | 6.27e-01 | 100.0% | 42.9% |
| 4455972 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.93 | 84.0 | 6.38e-01 | 100.0% | 45.6% |
| 4270770 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.93 | 84.0 | 6.16e-01 | 100.0% | 40.6% |
| 4275291 | 102.1.1.81 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 | 0.93 | 84.0 | 6.15e-01 | 100.0% | 40.8% |
| 4128948 | 102.1.1.81 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 | 0.93 | 84.0 | 6.20e-01 | 100.0% | 41.7% |
| 4150545 | 102.1.1.104 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, HHH_2, HHH_5 | 0.93 | 84.0 | 6.18e-01 | 100.0% | 41.7% |
| 4076819 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.93 | 88.0 | 6.35e-01 | 100.0% | 43.7% |
| 4353086 | 102.1.1.96 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2, HHH_5 | 0.93 | 84.0 | 6.13e-01 | 100.0% | 40.6% |
| 4404544 | 102.1.1.81 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 | 0.93 | 84.0 | 5.99e-01 | 100.0% | 37.4% |
| None | — | 0.93 | 84.0 | 6.18e-01 | 100.0% | 41.7% | |
| 4358944 | 102.1.1.81 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2+HHH_5 | 0.93 | 83.0 | 6.10e-01 | 100.0% | 40.6% |
| 4031661 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.93 | 83.0 | 6.01e-01 | 100.0% | 38.4% |
| 4243645 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.93 | 83.0 | 6.14e-01 | 100.0% | 41.7% |
| 4432595 | 102.1.1.96 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2, HHH_5 | 0.93 | 83.0 | 6.10e-01 | 100.0% | 40.6% |
| 4150827 | 102.1.1.54 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD | 0.92 | 87.0 | 6.45e-01 | 100.0% | 46.3% |
| 4332374 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.92 | 83.0 | 6.09e-01 | 100.0% | 40.6% |
| 4242919 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.92 | 82.0 | 6.05e-01 | 100.0% | 40.6% |
| 4509914 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.92 | 82.0 | 6.05e-01 | 100.0% | 40.6% |
| 4668260 | 102.1.1.99 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2 | 0.92 | 82.0 | 6.05e-01 | 100.0% | 40.6% |
| 4058875 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.91 | 84.0 | 6.12e-01 | 100.0% | 40.5% |
| 4097900 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.91 | 81.0 | 5.95e-01 | 100.0% | 39.5% |
| 3949223 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.91 | 81.0 | 6.15e-01 | 100.0% | 44.2% |
| 3278735 | 102.1.1.54 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD | 0.91 | 81.0 | 6.93e-01 | 100.0% | 63.5% |
| 4091625 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.90 | 82.0 | 6.03e-01 | 100.0% | 41.1% |
| 4333858 | 102.1.1.99 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH, DNA_ligase_ZBD, HHH_2 | 0.90 | 81.0 | 5.95e-01 | 100.0% | 40.6% |
| 4192182 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.90 | 83.0 | 6.00e-01 | 100.0% | 39.5% |
| 4289465 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.90 | 83.0 | 5.95e-01 | 100.0% | 38.5% |
| 4512985 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.90 | 80.0 | 5.90e-01 | 100.0% | 40.6% |
| 4343599 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.90 | 80.0 | 5.84e-01 | 100.0% | 39.5% |
| 3272982 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.89 | 82.0 | 5.94e-01 | 100.0% | 39.5% |
| 4147396 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.89 | 79.0 | 5.84e-01 | 100.0% | 40.6% |
| 3958117 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.89 | 84.0 | 6.06e-01 | 100.0% | 41.6% |
| 4074538 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.89 | 81.0 | 5.88e-01 | 100.0% | 39.5% |
| 4081948 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.89 | 84.0 | 5.97e-01 | 100.0% | 39.5% |
| 4199126 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.89 | 81.0 | 5.98e-01 | 100.0% | 41.7% |
| 3941815 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.89 | 78.0 | 5.90e-01 | 98.7% | 43.6% |
| 4100953 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.88 | 82.0 | 6.00e-01 | 100.0% | 41.1% |
| 4683217 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.88 | 83.0 | 5.98e-01 | 100.0% | 44.1% |
| 4506124 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.88 | 83.0 | 5.34e-01 | 100.0% | 33.7% |
| 4668711 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.88 | 80.0 | 5.83e-01 | 100.0% | 39.5% |
| 4579810 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.88 | 80.0 | 5.91e-01 | 100.0% | 41.7% |
| 4633328 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.88 | 82.0 | 5.38e-01 | 100.0% | 31.4% |
| 4129091 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.87 | 81.0 | 5.91e-01 | 100.0% | 41.1% |
| 4061313 | 102.1.1.82 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_5 | 0.87 | 80.0 | 5.83e-01 | 100.0% | 40.5% |
| 4103780 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.87 | 81.0 | 5.73e-01 | 100.0% | 48.1% |
| 4307230 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.85 | 80.0 | 5.78e-01 | 100.0% | 40.5% |
| 4251952 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.85 | 77.0 | 6.83e-01 | 100.0% | 71.4% |
| 4246187 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.85 | 80.0 | 5.74e-01 | 100.0% | 45.6% |
| 4148057 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.85 | 79.0 | 5.81e-01 | 100.0% | 41.6% |
| 4279100 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.84 | 79.0 | 5.69e-01 | 100.0% | 40.5% |
| 4486278 | 102.1.1.54 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD | 0.83 | 77.0 | 5.50e-01 | 100.0% | 39.0% |
| 4591208 | 102.1.1.10 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD,HHH_2 | 0.82 | 76.0 | 5.48e-01 | 100.0% | 38.5% |
| 4097470 | 102.1.1.54 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD | 0.82 | 74.0 | 6.65e-01 | 98.7% | 72.4% |
| 4402718 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.81 | 75.0 | 4.94e-01 | 100.0% | 26.9% |
| 4150789 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.81 | 75.0 | 5.30e-01 | 100.0% | 44.7% |
| 4241779 | 102.1.1.24 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_2 | 0.80 | 74.0 | 5.31e-01 | 100.0% | 38.0% |
| 4951167 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.79 | 62.0 | 6.72e-01 | 97.4% | 100.0% |
| 3967708 | 179.1.1.1 ↗ | alpha bundles › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › CO dehydrogenase ISP C-domain like › Fer2_2 | 0.50 | 41.0 | 4.00e-01 | 96.1% | 98.9% |
D2
high
residues 113-184
Domain cluster:
representative
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5tt5A05 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.82 | 74.0 | 7.25e-01 | 100.0% | 92.2% |
| 1cukA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.77 | 70.0 | 6.87e-01 | 98.6% | 94.7% |
| 8b0qA02 | 1.10.150.20 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain | 0.75 | 58.0 | 6.29e-01 | 86.1% | 100.0% |
| 2jhjA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.74 | 56.0 | 4.68e-01 | 80.6% | 95.0% |
| 3s6iA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.73 | 57.0 | 4.89e-01 | 84.7% | 99.1% |
| 6qwvH02 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.73 | 55.0 | 6.06e-01 | 83.3% | 100.0% |
| 1z1vA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.72 | 60.0 | 6.09e-01 | 91.7% | 94.3% |
| 2nobA03 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.71 | 61.0 | 5.02e-01 | 93.1% | 72.2% |
| 4unfA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.71 | 61.0 | 5.17e-01 | 94.4% | 65.8% |
| 1ornA01 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.71 | 60.0 | 5.16e-01 | 93.1% | 71.4% |
| 3f0zA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.70 | 54.0 | 4.51e-01 | 81.9% | 100.0% |
| 2d3dA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.69 | 60.0 | 5.75e-01 | 97.2% | 84.3% |
| 1keaA02 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.69 | 59.0 | 5.10e-01 | 95.8% | 72.6% |
| 1cokA00 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.67 | 54.0 | 5.61e-01 | 91.7% | 94.1% |
| 1puoB00 | 1.20.920.50 | Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › | 0.67 | 58.0 | 4.72e-01 | 100.0% | 88.7% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.64 | 51.0 | 4.91e-01 | 88.9% | 100.0% |
| 4ai4A00 | 1.10.340.30 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Hypothetical protein; domain 2 | 0.63 | 54.0 | 4.12e-01 | 100.0% | 46.2% |
| 2dceA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.63 | 51.0 | 5.04e-01 | 90.3% | 98.7% |
| 2p0wA03 | 1.10.10.390 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.62 | 44.0 | 4.84e-01 | 79.2% | 100.0% |
| 2kp7A01 | 1.10.150.110 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › DNA polymerase beta, N-terminal domain-like | 0.58 | 49.0 | 4.90e-01 | 93.1% | 100.0% |
| 4fcyA01 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.57 | 41.0 | 4.07e-01 | 94.4% | 71.8% |
| 2kz5A00 | 1.10.880.10 | Mainly Alpha › Orthogonal Bundle › Transcription Factor Skn-1; Chain P › Transcription factor, Skn-1-like, DNA-binding domain | 0.57 | 44.0 | 4.11e-01 | 90.3% | 67.0% |
| 2f2cA02 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.57 | 45.0 | 4.07e-01 | 90.3% | 71.7% |
| 1cf7B00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.55 | 46.0 | 4.45e-01 | 93.1% | 98.8% |
| 2lruA00 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.55 | 46.0 | 4.21e-01 | 95.8% | 80.6% |
| 2vqcA00 | 1.10.10.1470 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › F-112 protein-like | 0.54 | 37.0 | 3.79e-01 | 87.5% | 74.3% |
| 1np7A02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.53 | 38.0 | 3.29e-01 | 76.4% | 52.9% |
| 3t69A02 | 3.30.420.310 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 2-keto-3-deoxy-galactonokinase, C-terminal domain | 0.52 | 39.0 | 2.82e-01 | 84.7% | 26.1% |
| 4dxwA02 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.52 | 43.0 | 3.81e-01 | 95.8% | 66.1% |
| 3ephA02 | 1.10.20.140 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › | 0.50 | 32.0 | 3.30e-01 | 76.4% | 66.7% |
ECOD (53)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4110087 | 102.1.1.79 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › DNA_ligase_ZBD+HHH_2+HHH_5 | 0.88 | 81.0 | 5.87e-01 | 100.0% | 41.1% |
| None | — | 0.87 | 78.0 | 5.74e-01 | 100.0% | 40.0% | |
| 4196538 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.87 | 75.0 | 7.65e-01 | 100.0% | 97.1% |
| 4447612 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.85 | 73.0 | 7.47e-01 | 100.0% | 97.1% |
| 4077224 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.84 | 75.0 | 7.29e-01 | 100.0% | 87.5% |
| 3821721 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.83 | 65.0 | 7.06e-01 | 83.3% | 100.0% |
| 4170726 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.80 | 72.0 | 7.00e-01 | 100.0% | 96.2% |
| 3803579 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.79 | 61.0 | 6.58e-01 | 84.7% | 100.0% |
| None | — | 0.78 | 70.0 | 6.82e-01 | 100.0% | 92.5% | |
| 5060356 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.77 | 57.0 | 5.67e-01 | 88.9% | 74.7% |
| 4037683 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.77 | 63.0 | 6.56e-01 | 87.5% | 98.5% |
| 3258325 | 102.1.1.125 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › PF29917 | 0.76 | 56.0 | 6.00e-01 | 79.2% | 93.3% |
| 4291332 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.76 | 68.0 | 6.57e-01 | 100.0% | 92.5% |
| 4118903 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.76 | 66.0 | 6.41e-01 | 95.8% | 87.5% |
| None | — | 0.76 | 67.0 | 6.68e-01 | 100.0% | 96.0% | |
| 3531383 | 102.5.1.1 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › HHH_5 | 0.75 | 63.0 | 5.94e-01 | 93.1% | 76.5% |
| None | — | 0.75 | 67.0 | 6.38e-01 | 100.0% | 87.1% | |
| 4652526 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.75 | 66.0 | 6.53e-01 | 100.0% | 97.3% |
| None | — | 0.75 | 67.0 | 6.61e-01 | 98.6% | 96.0% | |
| 4979391 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.75 | 58.0 | 6.30e-01 | 84.7% | 100.0% |
| 4410020 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.74 | 68.0 | 6.27e-01 | 100.0% | 84.4% |
| 4523215 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.74 | 65.0 | 6.36e-01 | 100.0% | 100.0% |
| None | — | 0.74 | 64.0 | 6.47e-01 | 94.4% | 100.0% | |
| None | — | 0.74 | 65.0 | 6.50e-01 | 100.0% | 96.0% | |
| 3908409 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.73 | 62.0 | 6.20e-01 | 95.8% | 89.3% |
| None | — | 0.73 | 65.0 | 6.34e-01 | 100.0% | 90.0% | |
| 5048452 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.73 | 59.0 | 5.84e-01 | 91.7% | 84.0% |
| 3748615 | 102.5.1.9 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins › DUF7898 | 0.73 | 63.0 | 5.99e-01 | 95.8% | 80.0% |
| 4599951 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.73 | 61.0 | 6.18e-01 | 94.4% | 94.3% |
| 5036980 | 102.1.2.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase | 0.73 | 62.0 | 5.12e-01 | 93.1% | 67.2% |
| 5050871 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.73 | 59.0 | 6.20e-01 | 90.3% | 100.0% |
| 4664974 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.72 | 62.0 | 6.30e-01 | 94.4% | 100.0% |
| None | — | 0.72 | 63.0 | 6.10e-01 | 100.0% | 87.5% | |
| 3414919 | 102.5.1.0 ↗ | alpha arrays › HhH/H2TH › SAM-like subdomain in Sec63-like proteins › SAM-like subdomain in Sec63-like proteins | 0.72 | 52.0 | 5.73e-01 | 91.7% | 100.0% |
| 5030409 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.71 | 61.0 | 4.44e-01 | 95.8% | 39.5% |
| 3594036 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.71 | 58.0 | 5.92e-01 | 100.0% | 94.3% |
| 5078090 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.71 | 63.0 | 4.45e-01 | 97.2% | 37.4% |
| 4950805 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.71 | 54.0 | 3.62e-01 | 80.6% | 28.3% |
| None | — | 0.70 | 60.0 | 5.93e-01 | 98.6% | 92.0% | |
| 4138995 | 102.1.1.27 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › HHH_5 | 0.70 | 59.0 | 6.00e-01 | 94.4% | 100.0% |
| 5010691 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.69 | 58.0 | 4.07e-01 | 93.1% | 33.2% |
| 3976888 | 102.1.1.64 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › VRP1 | 0.69 | 59.0 | 5.74e-01 | 97.2% | 86.3% |
| 4978821 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.69 | 57.0 | 4.00e-01 | 90.3% | 39.5% |
| 4965013 | 102.1.2.1 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › HhH-GPD | 0.69 | 57.0 | 4.11e-01 | 95.8% | 36.9% |
| 5055562 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.68 | 59.0 | 5.54e-01 | 100.0% | 91.1% |
| 4486212 | 7014.1.1.1 ↗ | alpha bundles › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › Undecaprenyl pyrophosphate phosphatase (UppP) transmembrane domain › BacA | 0.63 | 51.0 | 4.53e-01 | 88.9% | 84.8% |
| 3582956 | 101.1.15.2 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › HAT1_C | 0.61 | 44.0 | 4.47e-01 | 76.4% | 78.6% |
| 4237263 | 4964.1.1.1 ↗ | alpha arrays › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › helical bundle in Bacillus stearothermophilus-like DNA polymerase I › DNA_pol_A | 0.61 | 51.0 | 4.46e-01 | 98.6% | 60.0% |
| 316547 | 101.1.15.2 ↗ | alpha arrays › HTH › HTH › HAT1, C-terminal domain › HAT1_C | 0.61 | 44.0 | 4.81e-01 | 77.8% | 100.0% |
| 5012907 | 3860.1.1.0 ↗ | alpha bundles › Myosin VI lever arm › Myosin VI lever arm › Myosin VI lever arm | 0.59 | 49.0 | 3.55e-01 | 95.8% | 32.7% |
| 3934081 | 101.1.1.10 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › ARID | 0.59 | 50.0 | 4.48e-01 | 100.0% | 87.6% |
| 4083384 | 3054.1.1.0 ↗ | alpha arrays › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol › Insert all-alpha domain in prim-pol | 0.56 | 49.0 | 4.33e-01 | 97.2% | 67.6% |
| 4150217 | 633.2.1.1 ↗ | alpha bundles › Bromodomain-like › Carnobacteriocin B2 immunity protein › Carnobacteriocin B2 immunity protein › EntA_Immun | 0.50 | 41.0 | 3.85e-01 | 91.7% | 92.2% |
D3
high
residues 195-272
Domain cluster:
rep: MN095770.1__QFR57709.1__CPT_Slocum_152__00129__D178-251
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00533.34 best | BRCT | 55.9 | 5.50e-15 | 98.7% | 96.2% |
| PF12738.14 | PTCB-BRCT | 27.5 | 3.50e-06 | 80.8% | 98.4% |