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S_p1_S3_coassembly_k141_2031891_prodigal-single.1__X__X__00144
Bact-VirS_p1_S3_coassembly_k141_2031891_prodigal-single.1__X__X__00144
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 4-102
Domain cluster:
rep: KX620753.1__AOT24562.1__E6_33__00033__D133-219
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF08797.17 best | HIRAN | 45.9 | 5.80e-12 | 98.0% | 78.1% |
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3k2yA00 | 3.30.70.2330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.84 | 77.0 | 7.62e-01 | 100.0% | 93.2% |
| 4tkoB01 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.69 | 41.0 | 4.24e-01 | 100.0% | 63.0% |
| 1p6vA00 | 2.40.280.10 | Mainly Beta › Beta Barrel › Small Protein B; Chain: A; › Small protein B | 0.62 | 55.0 | 5.16e-01 | 100.0% | 83.2% |
| 1ug8A00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.58 | 28.0 | 3.01e-01 | 100.0% | 49.4% |
| 2odhA02 | 3.30.70.3570 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MvaI/BcnI restriction endonuclease, recognition domain | 0.53 | 47.0 | 4.56e-01 | 99.0% | 97.3% |
| 1kbeA00 | 3.30.60.20 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › | 0.52 | 26.0 | 3.40e-01 | 71.7% | 93.9% |
| 1jeyA02 | 2.40.290.10 | Mainly Beta › Beta Barrel › Ku70; Chain: A; Domain 2 › | 0.52 | 38.0 | 3.56e-01 | 99.0% | 61.9% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3697243 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.92 | 80.0 | 7.18e-01 | 100.0% | 69.2% |
| 2069093 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.90 | 79.0 | 7.21e-01 | 100.0% | 72.2% |
| 3828376 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.87 | 74.0 | 6.67e-01 | 100.0% | 67.7% |
| 3330336 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.86 | 80.0 | 7.40e-01 | 100.0% | 80.8% |
| 3310707 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.84 | 78.0 | 7.05e-01 | 100.0% | 74.6% |
| 4387556 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.84 | 72.0 | 7.30e-01 | 100.0% | 89.9% |
| 2072038 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.83 | 75.0 | 7.50e-01 | 99.0% | 94.1% |
| 3303901 | 3468.1.1.0 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain | 0.83 | 68.0 | 5.67e-01 | 100.0% | 53.5% |
| 3334834 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.81 | 74.0 | 7.33e-01 | 100.0% | 92.3% |
| 4588531 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.79 | 76.0 | 6.79e-01 | 100.0% | 78.5% |
| 4372260 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.79 | 75.0 | 6.55e-01 | 100.0% | 81.4% |
| 3635125 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.79 | 75.0 | 6.15e-01 | 100.0% | 67.7% |
| 4263649 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.78 | 73.0 | 6.40e-01 | 100.0% | 76.4% |
| 3325200 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.77 | 74.0 | 6.70e-01 | 100.0% | 85.6% |
| 4342249 | 3468.1.1.1 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HIRAN | 0.77 | 72.0 | 6.42e-01 | 100.0% | 81.5% |
| 3721126 | 3468.1.1.0 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain | 0.75 | 71.0 | 6.28e-01 | 100.0% | 78.5% |
| 5023381 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.75 | 51.0 | 5.74e-01 | 100.0% | 93.3% |
| 4952916 | 109.4.1.3613 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HIRAN | 0.71 | 64.0 | 4.47e-01 | 97.0% | 34.2% |
| 4012275 | 3468.1.1.0 ↗ | a+b two layers › HLTF protein HIRAN domain › HLTF protein HIRAN domain › HLTF protein HIRAN domain | 0.65 | 58.0 | 5.13e-01 | 100.0% | 67.6% |
| 4552630 | 2.21.1.1 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SmpB | 0.63 | 57.0 | 5.28e-01 | 100.0% | 83.2% |
| 4093835 | 2.21.1.1 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SmpB | 0.62 | 55.0 | 5.20e-01 | 100.0% | 85.8% |
| 2831758 | 2.21.1.1 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › SmpB | 0.61 | 55.0 | 4.80e-01 | 100.0% | 68.9% |
| 3604095 | 2.21.1.0 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) | 0.59 | 52.0 | 5.15e-01 | 100.0% | 96.2% |
| 5064550 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.57 | 34.0 | 3.46e-01 | 99.0% | 61.1% |
| 5009771 | 2.21.1.5 ↗ | beta barrels › OB-fold › Small protein B (SmpB) › Small protein B (SmpB) › PF27234 | 0.56 | 49.0 | 4.19e-01 | 100.0% | 98.8% |
| 4028638 | 1.1.8.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain | 0.56 | 28.0 | 2.98e-01 | 85.9% | 50.0% |
| 4945332 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.55 | 48.0 | 4.35e-01 | 99.0% | 99.3% |
| 2841932 | 331.3.1.0 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like | 0.53 | 31.0 | 2.92e-01 | 93.9% | 44.4% |
| 4997186 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.53 | 45.0 | 4.14e-01 | 99.0% | 99.3% |
| 3223243 | 6165.1.1.1 ↗ | beta sandwiches › Piezo CTL2 domain › Piezo CTL2 domain › Piezo CTL2 domain › Piezo_RRas_bdg | 0.53 | 38.0 | 2.84e-01 | 76.8% | 78.2% |
| 4999586 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.53 | 46.0 | 4.02e-01 | 100.0% | 98.7% |
| 4958255 | 3636.1.1.0 ↗ | a+b two layers › XPD arch domain › XPD arch domain › XPD arch domain | 0.52 | 45.0 | 3.91e-01 | 100.0% | 99.4% |
| 3974284 | 3659.1.1.1 ↗ | a+b two layers › MotY N-terminal domain › MotY N-terminal domain › MotY N-terminal domain › MotY_N | 0.52 | 37.0 | 3.33e-01 | 76.8% | 68.3% |
| 3424661 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.51 | 37.0 | 2.64e-01 | 78.8% | 49.9% |
| 3838607 | 225.1.1.3 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › HATPase_c | 0.51 | 35.0 | 3.18e-01 | 100.0% | 49.7% |