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S_p1_S3_coassembly_k141_2031891_prodigal-single.1__X__X__00153
Bact-VirS_p1_S3_coassembly_k141_2031891_prodigal-single.1__X__X__00153
Identity
- Kingdom:
- phage
Quality
62.1
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-50
Domain cluster:
representative
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4e1pA00 | 3.30.60.230 | Alpha Beta › 2-Layer Sandwich › Wheat Germ Agglutinin (Isolectin 2); domain 1 › Lsr2, dimerisation domain | 0.74 | 55.0 | 5.38e-01 | 98.0% | 72.7% |
| 2qgpA00 | 1.10.30.50 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › | 0.73 | 65.0 | 5.45e-01 | 100.0% | 66.3% |
| 2bayE00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.71 | 47.0 | 4.54e-01 | 98.0% | 59.3% |
| 1noyA01 | 3.30.342.10 | Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 | 0.60 | 41.0 | 3.09e-01 | 74.0% | 28.4% |
| 3vk6A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.56 | 37.0 | 3.58e-01 | 96.0% | 57.6% |
| 4wz0A00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.51 | 43.0 | 3.44e-01 | 100.0% | 47.7% |
ECOD (16)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3269193 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.83 | 76.0 | 5.42e-01 | 100.0% | 45.2% |
| 3412005 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.83 | 76.0 | 5.37e-01 | 100.0% | 38.6% |
| 3721920 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.81 | 69.0 | 4.31e-01 | 98.0% | 22.9% |
| 5039655 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.80 | 74.0 | 6.21e-01 | 100.0% | 67.5% |
| 3278018 | 378.1.1.2 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH | 0.78 | 70.0 | 6.82e-01 | 98.0% | 92.7% |
| 4959590 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.77 | 71.0 | 5.81e-01 | 100.0% | 64.7% |
| 5082962 | 378.1.1.0 ↗ | few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases | 0.76 | 69.0 | 5.27e-01 | 100.0% | 48.2% |
| 3173835 | 377.1.1.46 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › AI2M-like_HNH | 0.68 | 63.0 | 5.92e-01 | 100.0% | 98.3% |
| 3489563 | 376.1.2.25 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › FYVE | 0.67 | 49.0 | 4.68e-01 | 100.0% | 66.7% |
| 4011434 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.62 | 42.0 | 3.57e-01 | 100.0% | 38.9% |
| 3493925 | 377.1.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Ribosomal_S26e | 0.61 | 41.0 | 3.72e-01 | 70.0% | 71.4% |
| 4160988 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.54 | 39.0 | 2.47e-01 | 82.0% | 93.7% |
| 3598911 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 37.0 | 2.43e-01 | 80.0% | 95.8% |
| 4612009 | 2004.1.1.73 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1 | 0.53 | 39.0 | 2.55e-01 | 86.0% | 99.6% |
| 3375162 | 220.1.1.59 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH1_SSRP1-like | 0.53 | 45.0 | 3.35e-01 | 100.0% | 82.2% |
| 3426827 | 2003.1.5.225 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › DUF7870 | 0.50 | 42.0 | 2.81e-01 | 100.0% | 26.9% |
D2
medium
residues 51-105