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S_p1_S3_coassembly_k141_2031891_prodigal-single.1__X__X__00159

Bact-Vir

S_p1_S3_coassembly_k141_2031891_prodigal-single.1__X__X__00159

Identity

Kingdom:
phage

Quality

94.5 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-19_109-237
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF13419.13 best HAD_2 33.1 7.70e-08 75.7% 57.3%
PF00702.33 Hydrolase 42.2 1.70e-10 72.9% 52.9%
CATH (98)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pkeA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.91 84.0 8.20e-01 100.0% 88.3%
2hoqA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.91 86.0 8.33e-01 98.6% 92.4%
3qnmA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.88 83.0 8.42e-01 99.3% 100.0%
2fi1A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.88 72.0 7.79e-01 100.0% 99.2%
3ib6C00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.88 82.0 7.55e-01 97.9% 97.2%
3ed5A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.87 83.0 8.29e-01 99.3% 97.3%
2hszA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.86 82.0 8.15e-01 100.0% 99.3%
3cnhA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.86 74.0 7.76e-01 100.0% 96.2%
2no4B01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.86 82.0 8.07e-01 100.0% 98.0%
3mc1A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.85 81.0 8.05e-01 99.3% 98.7%
3k1zA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.85 80.0 7.73e-01 97.2% 96.8%
2om6A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.85 81.0 7.97e-01 99.3% 98.0%
3e58B01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.85 81.0 8.09e-01 100.0% 100.0%
2nyvA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.85 80.0 7.86e-01 98.6% 94.7%
2ymmB01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.84 80.0 7.82e-01 99.3% 96.1%
3kbbA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.84 78.0 7.89e-01 97.2% 97.9%
3kzxA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.84 75.0 7.72e-01 97.2% 97.1%
2ah5A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.84 80.0 8.01e-01 99.3% 100.0%
1judA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.84 79.0 7.94e-01 98.6% 100.0%
2p11A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.84 78.0 7.78e-01 98.6% 95.9%
3d6jA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.84 77.0 7.74e-01 95.8% 100.0%
6f2xA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.84 79.0 7.82e-01 100.0% 99.3%
4g9bA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.84 75.0 7.46e-01 100.0% 91.2%
3smvA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.84 79.0 7.72e-01 100.0% 96.8%
1x42A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.84 78.0 7.82e-01 97.9% 97.9%
2ho4B01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.84 78.0 7.45e-01 97.9% 97.5%
4uavA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.83 78.0 7.51e-01 99.3% 94.4%
1te2A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.83 79.0 7.85e-01 99.3% 99.3%
2gfhA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.83 79.0 7.61e-01 100.0% 91.3%
4ex6A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.83 79.0 7.75e-01 100.0% 98.7%
2odaA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.83 78.0 6.93e-01 98.6% 93.8%
3vayA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.82 77.0 7.73e-01 98.6% 97.9%
2ybdA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.82 77.0 7.74e-01 100.0% 98.6%
3l5kA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.82 77.0 7.52e-01 100.0% 96.2%
2x4dA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.81 77.0 7.42e-01 100.0% 95.0%
2c4nA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.81 76.0 7.64e-01 98.6% 100.0%
2zg6B01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.81 69.0 7.29e-01 98.6% 97.7%
2w43A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.81 76.0 7.60e-01 97.9% 97.9%
3kc2A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.81 76.0 7.26e-01 99.3% 97.6%
3qgmA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.81 76.0 7.30e-01 100.0% 100.0%
4uw9A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.80 74.0 7.41e-01 97.2% 95.8%
1vjrA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.80 75.0 7.41e-01 100.0% 98.0%
2cftA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.80 75.0 7.11e-01 100.0% 91.1%
4xrpA02 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.80 58.0 6.16e-01 75.0% 100.0%
3dv9A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.79 74.0 6.99e-01 99.3% 85.3%
1wviA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.79 73.0 7.36e-01 98.6% 100.0%
2pr7A00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.78 68.0 6.99e-01 98.6% 96.4%
1u7pD00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.78 74.0 7.11e-01 100.0% 95.7%
7bsqA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.77 72.0 6.20e-01 99.3% 95.4%
4nv0A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.76 70.0 6.07e-01 100.0% 82.0%
2g07A01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.74 68.0 6.24e-01 100.0% 83.4%
3fvvA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.74 66.0 6.55e-01 94.4% 100.0%
1y8aA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.73 68.0 6.40e-01 97.9% 84.4%
3hbjA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.72 66.0 5.33e-01 100.0% 100.0%
5iz4A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.72 65.0 5.42e-01 98.6% 91.5%
6lfnA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.71 64.0 5.22e-01 97.2% 98.9%
5jc8C00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 66.0 5.40e-01 100.0% 90.5%
3oidC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.71 64.0 5.30e-01 97.9% 91.1%
1t9zA00 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.70 66.0 6.07e-01 98.6% 85.6%
7w09A01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.70 65.0 5.37e-01 100.0% 98.4%
1e7wB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 64.0 5.21e-01 97.9% 91.5%
3i3oG00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 64.0 5.36e-01 100.0% 85.7%
3vzpC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.70 63.0 5.27e-01 97.9% 91.8%
3ausA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.69 64.0 5.20e-01 100.0% 88.5%
4wnyA00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.69 53.0 5.49e-01 79.9% 100.0%
1iy8A00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 63.0 5.17e-01 100.0% 91.9%
3i6iA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 62.0 5.70e-01 97.9% 87.0%
4e3zB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 62.0 5.28e-01 97.9% 92.5%
3lf2A01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 62.0 5.15e-01 97.9% 94.3%
3wtbC00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 61.0 5.13e-01 97.9% 91.4%
5u4qB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 62.0 4.81e-01 99.3% 72.0%
3u49D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 62.0 5.14e-01 97.9% 91.3%
5bt9D00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 62.0 5.20e-01 100.0% 89.3%
5ilgB00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 62.0 5.10e-01 100.0% 88.4%
4iuyA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.68 62.0 5.13e-01 100.0% 90.5%
2f9fA00 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.67 59.0 5.65e-01 98.6% 81.9%
4lvuA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.67 61.0 5.09e-01 100.0% 89.3%
7c2xA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.66 58.0 4.72e-01 96.5% 94.2%
3nywD00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 60.0 5.29e-01 100.0% 91.1%
3ragB00 3.40.50.410 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › von Willebrand factor, type A domain 0.65 58.0 5.03e-01 99.3% 94.7%
3loqA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 53.0 5.60e-01 93.8% 98.4%
4hlnA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.63 58.0 5.08e-01 98.6% 69.2%
1fuyB01 3.40.50.1100 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.63 45.0 4.36e-01 96.5% 65.2%
3nd5A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.61 47.0 4.64e-01 80.6% 82.9%
7pt4A01 3.40.50.970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Thiamin diphosphate (ThDP)-binding fold, Pyr/PP domains 0.61 50.0 4.61e-01 90.3% 84.0%
3ab8A00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 53.0 4.37e-01 95.8% 98.9%
2lciA00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 48.0 4.93e-01 98.6% 91.0%
3olqA00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 53.0 4.19e-01 97.9% 96.4%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 54.0 4.73e-01 98.6% 88.3%
2l69A00 3.40.50.11230 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.60 46.0 4.82e-01 98.6% 88.1%
4uulA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 50.0 4.94e-01 91.7% 100.0%
2f8lA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 54.0 4.52e-01 100.0% 89.2%
1qg8A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.59 47.0 4.04e-01 86.8% 95.8%
5supC01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.59 47.0 4.16e-01 86.1% 74.6%
3zf8A00 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.57 49.0 3.92e-01 94.4% 92.4%
2z86D01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.56 46.0 3.57e-01 88.2% 68.9%
7k3zG01 3.50.7.10 Alpha Beta › 3-Layer(bba) Sandwich › GroEL › GroEL 0.56 41.0 3.65e-01 97.2% 52.6%
1r6xA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.55 47.0 4.19e-01 95.8% 73.7%
ECOD (100)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5013621 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.91 87.0 7.05e-01 98.6% 93.8%
4619760 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.91 87.0 7.13e-01 100.0% 94.6%
4612677 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.89 83.0 6.68e-01 95.8% 100.0%
5039836 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.89 85.0 7.00e-01 100.0% 92.5%
5053405 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.89 85.0 6.84e-01 99.3% 96.4%
None 0.89 84.0 7.03e-01 98.6% 99.1%
169082 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.88 85.0 7.08e-01 100.0% 99.1%
3989652 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.88 84.0 6.92e-01 99.3% 97.0%
4950849 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.88 79.0 6.77e-01 93.1% 99.5%
5063583 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.88 82.0 6.96e-01 97.9% 100.0%
5015055 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.88 82.0 6.87e-01 97.2% 98.7%
3589846 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.87 82.0 6.95e-01 97.9% 99.1%
4983468 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.87 83.0 6.72e-01 99.3% 94.4%
4031245 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.87 84.0 6.90e-01 100.0% 94.9%
5078018 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.87 83.0 6.88e-01 99.3% 98.7%
5073312 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.87 83.0 6.90e-01 99.3% 97.4%
5001110 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.87 79.0 6.52e-01 95.1% 98.3%
164271 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.87 84.0 6.91e-01 100.0% 91.8%
4171339 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.87 81.0 6.99e-01 97.9% 98.6%
4957125 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.86 82.0 6.47e-01 98.6% 97.0%
3955181 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.86 82.0 6.98e-01 98.6% 99.1%
4970938 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.86 83.0 6.84e-01 100.0% 97.9%
4995838 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.86 83.0 6.93e-01 100.0% 97.3%
3971352 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.86 82.0 7.00e-01 99.3% 99.5%
4954319 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.86 82.0 6.76e-01 98.6% 97.9%
3284489 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.86 82.0 6.89e-01 98.6% 97.3%
4974099 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.86 81.0 6.94e-01 98.6% 99.1%
5026712 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.86 80.0 6.74e-01 96.5% 98.2%
4982401 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.86 82.0 6.68e-01 100.0% 94.3%
3587875 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.86 81.0 6.87e-01 97.9% 100.0%
4398883 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.86 80.0 6.90e-01 97.9% 99.5%
5075124 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.86 82.0 6.78e-01 100.0% 97.0%
5065394 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.85 82.0 6.73e-01 100.0% 94.5%
5070005 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.85 80.0 6.51e-01 97.2% 96.7%
4944484 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.85 78.0 6.74e-01 95.8% 100.0%
5012876 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.85 80.0 6.65e-01 97.9% 100.0%
5077435 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.85 79.0 6.76e-01 97.2% 100.0%
4085353 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.85 81.0 6.88e-01 100.0% 100.0%
3963892 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.85 81.0 6.89e-01 100.0% 98.2%
4940123 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.85 80.0 6.90e-01 98.6% 100.0%
3408417 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.85 81.0 6.56e-01 100.0% 94.8%
4539173 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.85 80.0 6.81e-01 99.3% 95.9%
4031228 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.85 78.0 6.58e-01 96.5% 100.0%
461642 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.85 81.0 7.01e-01 100.0% 100.0%
5048371 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.85 80.0 6.71e-01 98.6% 97.8%
4975320 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.85 81.0 6.81e-01 99.3% 98.6%
3287843 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.85 80.0 6.81e-01 98.6% 98.6%
3908866 2006.1.1.16 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like,Hydrolase_6 0.84 79.0 7.74e-01 98.6% 96.8%
162767 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.84 80.0 6.83e-01 100.0% 96.3%
4940206 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.84 79.0 6.80e-01 98.6% 100.0%
9875 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.84 80.0 6.89e-01 100.0% 100.0%
5051217 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.84 78.0 6.54e-01 97.2% 100.0%
4943605 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.84 80.0 6.47e-01 100.0% 93.2%
3590730 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.84 79.0 6.79e-01 98.6% 98.6%
5074271 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.84 80.0 6.63e-01 99.3% 99.6%
4133911 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.83 79.0 6.77e-01 98.6% 99.5%
4085028 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.83 79.0 6.71e-01 98.6% 97.2%
3355181 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.83 79.0 6.56e-01 100.0% 88.9%
3587219 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.83 78.0 6.76e-01 97.9% 99.0%
4066059 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.83 79.0 6.75e-01 100.0% 99.1%
3973042 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.83 72.0 6.11e-01 100.0% 59.5%
5056245 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.83 79.0 6.87e-01 98.6% 100.0%
4427505 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.83 79.0 7.46e-01 100.0% 93.3%
4941805 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.82 77.0 6.59e-01 98.6% 99.5%
4048964 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.82 78.0 6.63e-01 99.3% 99.5%
4964852 2006.1.1.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like 0.82 78.0 7.71e-01 100.0% 99.3%
4990226 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.82 77.0 6.39e-01 97.9% 96.1%
4945520 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.82 78.0 7.51e-01 100.0% 94.9%
3839871 2006.1.1.2 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.82 71.0 6.24e-01 100.0% 65.5%
3484208 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.82 77.0 7.36e-01 100.0% 95.2%
3312305 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.82 78.0 6.42e-01 100.0% 91.9%
5044880 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.82 77.0 6.59e-01 100.0% 96.8%
5053383 2006.1.1.17 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_6 0.81 76.0 7.20e-01 97.9% 95.2%
3551579 2006.1.1.16 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like,Hydrolase_6 0.81 77.0 7.32e-01 100.0% 92.7%
3398460 2006.1.1.16 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like,Hydrolase_6 0.81 77.0 7.20e-01 100.0% 91.2%
4100225 2006.1.1.16 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like,Hydrolase_6 0.81 76.0 7.55e-01 100.0% 98.7%
5057703 2006.1.1.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like 0.80 76.0 7.58e-01 98.6% 98.6%
5065724 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.80 75.0 6.61e-01 98.6% 97.0%
5077381 2006.1.1.15 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like 0.80 75.0 7.26e-01 99.3% 95.0%
4028333 2006.1.1.16 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like,Hydrolase_6 0.80 72.0 6.81e-01 95.8% 85.9%
5073492 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.80 76.0 6.41e-01 100.0% 98.6%
3298158 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.79 75.0 6.10e-01 100.0% 86.0%
5010337 2006.1.1.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_PPase 0.79 75.0 6.92e-01 98.6% 92.0%
5030059 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.79 73.0 6.90e-01 100.0% 83.6%
4485398 2006.1.1.16 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_like,Hydrolase_6 0.79 74.0 7.27e-01 100.0% 94.2%
5077298 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.79 74.0 6.31e-01 100.0% 93.2%
3386095 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.79 74.0 6.42e-01 97.9% 99.0%
3289633 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.79 71.0 6.92e-01 100.0% 87.7%
5067308 2006.1.1.17 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_6 0.78 74.0 7.34e-01 100.0% 100.0%
4971662 2006.1.1.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_PPase 0.78 73.0 7.04e-01 98.6% 100.0%
None 0.78 72.0 5.92e-01 99.3% 94.0%
5073238 2006.1.1.13 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Acid_PPase 0.78 71.0 6.86e-01 95.8% 100.0%
4985743 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.77 74.0 7.08e-01 100.0% 99.4%
5001472 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.77 72.0 6.44e-01 97.9% 97.4%
5074381 5073.1.1.11 alpha bundles › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain-related › Calcium ATPase transmembrane domain M › Cation_ATPase_C 0.74 69.0 4.47e-01 100.0% 26.2%
3947532 2005.1.1.0 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.73 56.0 6.13e-01 79.9% 100.0%
3711640 2006.1.1.4 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › NIF 0.73 66.0 5.96e-01 98.6% 72.6%
3594861 2006.1.1.0 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like 0.71 67.0 6.18e-01 100.0% 87.2%
3090023 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.70 64.0 5.34e-01 100.0% 86.9%
4930502 7534.1.1.1 a/b three-layered sandwiches › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Undecaprenyl diphosphate synthase › Prenyltransf 0.61 56.0 5.40e-01 100.0% 92.1%
D2 high residues 22-105
PDB
Domain cluster: representative
CATH (64)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2pkeA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.88 75.0 7.83e-01 98.8% 97.4%
3ddhA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.87 77.0 7.86e-01 98.8% 97.5%
1a00B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.73 56.0 4.72e-01 83.3% 92.5%
2lyiA01 1.10.274.60 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain 0.72 65.0 5.38e-01 100.0% 95.3%
1gcvA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.72 54.0 4.63e-01 82.1% 92.1%
2k3qA00 1.10.274.70 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain 0.70 61.0 5.52e-01 100.0% 78.8%
2i5uA00 1.10.10.630 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › DnaD domain-like 0.70 49.0 5.12e-01 73.8% 80.5%
1oj6A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.70 55.0 4.58e-01 84.5% 92.5%
1or7B01 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.70 51.0 4.92e-01 77.4% 94.7%
4yozA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 57.0 4.54e-01 92.9% 57.8%
1aisB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 55.0 5.28e-01 92.9% 74.7%
2hszA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.69 52.0 5.48e-01 96.4% 92.0%
2zs0A00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.69 52.0 4.49e-01 83.3% 95.0%
1c9bA02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.69 53.0 4.96e-01 91.7% 67.0%
1hbgA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.68 53.0 4.42e-01 84.5% 91.2%
3tahA02 1.10.287.1770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.68 48.0 4.80e-01 100.0% 71.6%
4bbrM00 1.10.472.170 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › 0.68 56.0 4.30e-01 91.7% 39.9%
1h3lB00 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.67 48.0 5.02e-01 77.4% 82.1%
6z4xA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.67 55.0 4.53e-01 90.5% 53.5%
3ubcA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.67 52.0 4.52e-01 84.5% 96.2%
3umbA02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.67 54.0 5.56e-01 89.3% 100.0%
2g8lB01 1.10.8.380 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 0.67 49.0 5.34e-01 79.8% 97.0%
5xs2B02 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.67 58.0 5.05e-01 100.0% 68.2%
2ivxB01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 56.0 4.78e-01 95.2% 57.9%
5b00A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.66 54.0 3.83e-01 89.3% 37.9%
3umcD02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.66 53.0 5.50e-01 86.9% 100.0%
2i53A01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.66 56.0 4.82e-01 98.8% 60.1%
1kkhA01 3.30.230.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › 0.65 57.0 4.47e-01 98.8% 46.4%
3hyuA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.65 50.0 4.26e-01 84.5% 90.1%
3h4cA01 1.10.472.10 Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like 0.64 53.0 5.14e-01 92.9% 81.2%
3fm9A02 1.10.150.240 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 0.64 51.0 5.27e-01 98.8% 93.6%
2hs5A02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.64 51.0 4.38e-01 88.1% 62.1%
1cg5B00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.63 48.0 4.16e-01 84.5% 91.5%
6mh4A03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.63 43.0 4.42e-01 75.0% 74.7%
2mx8A01 1.10.274.70 Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, N-terminal domain 0.62 54.0 4.95e-01 98.8% 85.0%
4od4A01 1.10.357.140 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › UbiA prenyltransferase 0.62 47.0 3.94e-01 83.3% 95.5%
2y1eA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.62 42.0 4.22e-01 70.2% 79.3%
1a41A02 1.20.120.380 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Type 1-topoisomerase catalytic fragment, domain 2 0.61 43.0 4.22e-01 81.0% 67.0%
5jazA03 1.10.1740.10 Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif 0.61 43.0 4.20e-01 73.8% 85.7%
3ie7A00 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.60 54.0 3.69e-01 100.0% 32.7%
3c7jA02 1.20.120.530 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like 0.60 47.0 4.00e-01 86.9% 58.2%
3on2A00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.60 41.0 3.25e-01 72.6% 71.1%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.59 44.0 4.67e-01 100.0% 90.5%
3b4qA00 1.10.1200.100 Mainly Alpha › Orthogonal Bundle › Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A › conserved protein domain from corynebacterium diphtheriae 0.58 44.0 4.45e-01 96.4% 80.5%
4huqS00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.56 49.0 3.99e-01 98.8% 76.2%
2a0uB01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.56 40.0 3.33e-01 76.2% 41.9%
6cy5A01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.56 38.0 3.82e-01 72.6% 68.5%
2vwaA00 1.20.58.1330 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Plasmodium falciparum UIS3 membrane protein 0.56 41.0 3.95e-01 79.8% 71.7%
6ll8A01 3.90.1640.10 Alpha Beta › Alpha-Beta Complex › inorganic pyrophosphatase (n-terminal core) › inorganic pyrophosphatase (n-terminal core) 0.55 48.0 3.73e-01 97.6% 96.2%
4kjmA02 1.20.5.420 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C 0.54 35.0 4.07e-01 82.1% 100.0%
4v1gA00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.54 37.0 3.70e-01 100.0% 69.4%
1w53A00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.54 37.0 3.78e-01 71.4% 78.6%
2z1qB04 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.54 47.0 4.04e-01 98.8% 80.1%
2cdqA02 1.20.120.1320 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Aspartokinase, catalytic domain 0.53 39.0 3.82e-01 79.8% 84.5%
3zheA02 1.25.40.760 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.53 42.0 3.13e-01 85.7% 37.2%
2hjmA01 1.20.120.460 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like 0.53 44.0 4.44e-01 94.0% 93.0%
5d1rB00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.52 39.0 2.94e-01 81.0% 36.7%
1jgcA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.52 46.0 3.74e-01 100.0% 51.9%
3s63A00 1.10.225.10 Mainly Alpha › Orthogonal Bundle › NK-Lysin › Saposin-like 0.51 36.0 3.60e-01 79.8% 71.6%
1vw4L02 1.10.246.170 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.51 42.0 4.21e-01 94.0% 89.4%
4ldsA00 1.20.1250.20 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › MFS general substrate transporter like domains 0.51 42.0 2.80e-01 97.6% 41.1%
4l3uA00 1.20.1480.40 Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 0.51 42.0 3.87e-01 100.0% 80.5%
2v6yA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.51 34.0 3.62e-01 70.2% 88.0%
1h99A02 1.10.1790.10 Mainly Alpha › Orthogonal Bundle › PTS-regulatory domain, PRD › PRD domain 0.50 44.0 4.13e-01 98.8% 78.3%
ECOD (69)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
169082 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.87 78.0 5.51e-01 100.0% 34.9%
5036344 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.77 70.0 4.98e-01 100.0% 35.3%
4990528 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.74 57.0 5.76e-01 86.9% 81.2%
3623733 102.1.2.27 alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › DNA-glycosylase › Tcp11 0.73 66.0 5.21e-01 100.0% 52.9%
4640576 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.73 65.0 4.76e-01 100.0% 52.9%
4969272 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.73 61.0 5.40e-01 91.7% 65.0%
3577412 5054.1.1.83 alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Tcp11 0.73 66.0 5.10e-01 100.0% 50.0%
4481405 604.39.1.30 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › SpoIIE_N 0.72 66.0 5.59e-01 100.0% 94.1%
4943136 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.72 55.0 5.45e-01 91.7% 77.8%
5046548 2006.1.1.1 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase 0.72 64.0 4.61e-01 100.0% 54.2%
3614668 1065.1.1.0 alpha bundles › SPX domain › SPX domain › SPX domain 0.72 65.0 4.34e-01 100.0% 41.6%
4941415 1076.1.1.0 alpha bundles › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related › Intramembrane protease Rce1-related 0.71 54.0 4.46e-01 81.0% 90.0%
1879330 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.71 55.0 5.42e-01 90.5% 78.0%
4996071 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.70 55.0 5.41e-01 92.9% 80.0%
3176163 101.1.10.7 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.70 53.0 4.48e-01 88.1% 47.3%
4945282 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.70 56.0 5.08e-01 92.9% 64.9%
4978149 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.70 57.0 5.51e-01 90.5% 81.1%
4982983 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.70 56.0 5.44e-01 92.9% 78.9%
3742618 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.69 54.0 5.02e-01 90.5% 65.7%
5076381 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.69 56.0 5.30e-01 92.9% 75.0%
5042605 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.69 54.0 5.23e-01 91.7% 76.3%
4944102 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.69 53.0 5.25e-01 91.7% 78.9%
4999627 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.69 56.0 4.84e-01 92.9% 56.3%
4961655 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.69 53.0 5.14e-01 91.7% 74.7%
3378930 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.69 56.0 4.96e-01 91.7% 62.4%
3610169 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.68 56.0 4.17e-01 92.9% 33.9%
3598088 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.68 56.0 4.93e-01 92.9% 60.0%
4970309 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.68 55.0 5.36e-01 92.9% 80.0%
3727859 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.68 60.0 4.25e-01 100.0% 85.7%
3443564 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.68 56.0 4.60e-01 92.9% 51.2%
5051285 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.68 54.0 4.43e-01 91.7% 45.5%
5025139 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.68 54.0 5.27e-01 92.9% 78.9%
3703267 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.68 56.0 5.05e-01 92.9% 65.0%
4962267 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.67 54.0 5.36e-01 92.9% 83.3%
5037039 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.67 54.0 4.79e-01 92.9% 60.0%
None 0.67 57.0 4.88e-01 96.4% 60.7%
4947863 101.1.10.0 alpha arrays › HTH › HTH › Cyclin-like 0.67 52.0 5.10e-01 91.7% 78.9%
5078890 129.1.1.0 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like 0.67 46.0 3.98e-01 71.4% 68.5%
4000036 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.67 59.0 5.08e-01 100.0% 64.4%
3430097 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.67 58.0 4.19e-01 100.0% 52.5%
4994316 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.66 55.0 4.72e-01 92.9% 55.7%
3807187 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.66 58.0 4.81e-01 100.0% 78.7%
5061156 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.66 55.0 4.93e-01 92.9% 67.5%
3930777 106.1.1.1 alpha arrays › Globin-like › Globin-like › Globin-like › Globin 0.66 51.0 4.15e-01 84.5% 86.1%
3581844 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.66 55.0 4.66e-01 96.4% 56.0%
3476361 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.66 56.0 5.04e-01 97.6% 67.5%
3516176 3881.1.1.1 alpha bundles › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › DUF3819 0.66 57.0 4.18e-01 100.0% 90.8%
4027602 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.66 57.0 4.74e-01 100.0% 54.2%
3756619 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.65 55.0 4.64e-01 96.4% 54.7%
5064398 101.1.10.3 alpha arrays › HTH › HTH › Cyclin-like › TFIIB 0.65 53.0 5.06e-01 91.7% 77.0%
3627307 101.1.10.1 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_N 0.65 56.0 4.49e-01 100.0% 61.1%
3940617 101.1.10.7 alpha arrays › HTH › HTH › Cyclin-like › Cyclin_C 0.65 50.0 4.47e-01 97.6% 58.3%
3502614 3881.1.1.1 alpha bundles › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › CNOT9 binding domain CN9BD (DUF3819) › DUF3819 0.64 55.0 4.06e-01 100.0% 91.7%
3503474 2006.1.1.44 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase, Hydrolase_like 0.62 54.0 3.97e-01 100.0% 38.2%
3853461 1075.1.1.4 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain › ABC2_membrane_3 0.61 45.0 3.19e-01 77.4% 60.8%
5010209 5067.1.1.4 alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › MMPL 0.61 52.0 4.04e-01 100.0% 68.1%
3500773 3832.1.1.1 alpha bundles › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › DUF758 0.61 46.0 3.62e-01 79.8% 73.1%
3731006 604.12.1.0 alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.60 35.0 3.37e-01 100.0% 49.5%
4030246 545.1.1.1 alpha bundles › Gametocyte protein Pfg27-related › Gametocyte protein Pfg27-related › Gametocyte protein Pfg27 › Pfg27 0.58 49.0 4.02e-01 97.6% 58.8%
4478129 166.1.1.1 alpha superhelices › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › 1-deoxy-D-xylulose-5-phosphate reductoisomerase-C › DXPR_C 0.56 39.0 3.90e-01 73.8% 71.1%
4034108 1075.1.1.0 alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › ABCG5/ABCG8 transmembrane domain 0.54 41.0 3.40e-01 81.0% 95.5%
4182059 621.1.1.3 alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB 0.54 40.0 3.71e-01 79.8% 78.2%
4215095 604.39.1.0 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters 0.53 45.0 3.11e-01 100.0% 82.1%
5028214 3457.1.1.1 alpha bundles › GxGD membrane protease › GxGD membrane protease › GxGD membrane protease › Peptidase_A24 0.52 42.0 3.20e-01 86.9% 82.5%
4280250 377.1.1.11 few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › RecO_C 0.52 45.0 3.71e-01 100.0% 95.8%
3824988 109.3.1.339 alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › Vps35 0.52 43.0 3.37e-01 90.5% 43.4%
3950977 5058.1.1.9 alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Colicin_V 0.51 44.0 3.64e-01 97.6% 71.0%
3463576 3684.1.1.2 alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › BPS1 0.50 39.0 2.89e-01 82.1% 96.4%
3612915 604.1.1.0 alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.50 31.0 2.95e-01 100.0% 48.6%