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S_p1_S3_coassembly_k141_2031891_prodigal-single.1__X__X__00185
Bact-VirS_p1_S3_coassembly_k141_2031891_prodigal-single.1__X__X__00185
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 14-102
Domain cluster:
rep: OL774866.1__UJD17639.1__MissG2_0001__00001__D31-100
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06949.17 best | DUF1292 | 56.9 | 4.40e-15 | 88.8% | 100.0% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4r80A00 | 3.10.450.630 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.61 | 37.0 | 3.97e-01 | 98.9% | 71.1% |
| 4b08A01 | 2.40.50.730 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.60 | 41.0 | 4.34e-01 | 97.8% | 77.8% |
| 4kyzA00 | 3.30.70.600 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 | 0.58 | 38.0 | 3.15e-01 | 89.9% | 35.9% |
| 3en8A01 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.57 | 37.0 | 3.45e-01 | 100.0% | 51.8% |
| 2qx2A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.57 | 48.0 | 3.34e-01 | 95.5% | 55.0% |
| 4hn3A00 | 3.10.570.10 | Alpha Beta › Roll › sex pheromone staph- cam373 precursor fold › sex pheromone staph- cam373 precursor domain | 0.56 | 49.0 | 3.36e-01 | 97.8% | 44.9% |
| 4pswA02 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.56 | 49.0 | 4.33e-01 | 96.6% | 91.0% |
| 2d9uA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.56 | 36.0 | 3.86e-01 | 76.4% | 77.0% |
| 4hy1A02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.56 | 44.0 | 3.73e-01 | 87.6% | 90.5% |
| 3rmhB00 | 2.40.50.810 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 39.0 | 3.40e-01 | 76.4% | 79.7% |
| 3qc2B00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.53 | 43.0 | 2.87e-01 | 88.8% | 49.6% |
| 3ec9A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 38.0 | 3.35e-01 | 100.0% | 51.9% |
| 6uqjA02 | 3.20.20.80 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases | 0.52 | 44.0 | 2.98e-01 | 93.3% | 37.4% |
| 1z5bB03 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.52 | 41.0 | 3.56e-01 | 88.8% | 89.3% |
| 1k90A02 | 3.90.1760.10 | Alpha Beta › Alpha-Beta Complex › Adenylylcyclase toxin fold › Anthrax toxin, edema factor, central domain | 0.51 | 36.0 | 3.01e-01 | 75.3% | 86.8% |
| 3gwrB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 38.0 | 3.43e-01 | 100.0% | 56.7% |
| 2g8sB00 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.50 | 41.0 | 2.79e-01 | 89.9% | 50.7% |
| 1gpqB00 | 3.40.1420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Inhibitor of vertebrate lysozyme, Ivy › Inhibitor of vertebrate lysozyme | 0.50 | 41.0 | 3.71e-01 | 92.1% | 89.1% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 39.0 | 3.48e-01 | 97.8% | 58.6% |
ECOD (30)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3589630 | 243.4.1.4 ↗ | a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like › DUF1292 | 0.71 | 59.0 | 5.90e-01 | 93.3% | 88.9% |
| 3511505 | 9.23.1.6 ↗ | beta barrels › Lipocalins/Streptavidin › Hypothetical protein BT_0869 › Hypothetical protein BT_0869 › DUF7042 | 0.64 | 46.0 | 4.19e-01 | 75.3% | 84.2% |
| 3782255 | 7579.1.1.6 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1 | 0.64 | 54.0 | 3.38e-01 | 91.0% | 33.3% |
| 3497118 | 9.14.1.0 ↗ | beta barrels › Lipocalins/Streptavidin › Uncharacterized protein YLR301W › Uncharacterized protein YLR301W | 0.64 | 46.0 | 3.95e-01 | 75.3% | 76.6% |
| 3494351 | 9.1.1.50 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7042 | 0.63 | 45.0 | 3.90e-01 | 75.3% | 75.2% |
| 3255969 | 2004.1.1.174 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Elong_Iki1 | 0.59 | 42.0 | 2.98e-01 | 74.2% | 97.8% |
| None | — | 0.58 | 51.0 | 3.02e-01 | 100.0% | 39.5% | |
| 4030928 | 3535.1.1.1 ↗ | a+b two layers › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › Sex pheromone staph-cAM373 › CamS | 0.57 | 48.0 | 3.67e-01 | 94.4% | 74.4% |
| 3683669 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 37.0 | 3.57e-01 | 94.4% | 57.1% |
| 3684974 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.56 | 43.0 | 2.65e-01 | 85.4% | 35.0% |
| 3651019 | 5.1.4.101 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › DUF1618 | 0.56 | 49.0 | 3.42e-01 | 95.5% | 44.0% |
| 3217505 | 9.1.1.55 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7045 | 0.56 | 41.0 | 3.79e-01 | 77.5% | 69.6% |
| 3622886 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.55 | 48.0 | 2.87e-01 | 100.0% | 36.4% |
| 3704832 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.55 | 46.0 | 2.99e-01 | 93.3% | 33.9% |
| 4316065 | 243.3.1.15 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Imm35 | 0.54 | 38.0 | 3.89e-01 | 77.5% | 76.5% |
| 3715923 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.54 | 45.0 | 2.94e-01 | 92.1% | 58.8% |
| 3960415 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.54 | 39.0 | 3.54e-01 | 75.3% | 58.3% |
| 3465939 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.54 | 47.0 | 3.11e-01 | 95.5% | 33.7% |
| 5019857 | 71.1.1.8 ↗ | beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like | 0.53 | 39.0 | 3.05e-01 | 100.0% | 35.0% |
| 3507295 | 304.166.1.9 ↗ | a+b two layers › Alpha-beta plaits › Nup54 ferredoxin-like domain › Nup54 ferredoxin-like domain › PF29949 | 0.53 | 41.0 | 4.00e-01 | 91.0% | 77.0% |
| 4955607 | 3435.1.1.0 ↗ | a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC | 0.52 | 39.0 | 3.05e-01 | 82.0% | 43.3% |
| 4420721 | 5.1.2.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_32N | 0.52 | 46.0 | 3.11e-01 | 98.9% | 56.5% |
| 3598841 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.52 | 46.0 | 3.34e-01 | 100.0% | 59.6% |
| 3719200 | 7579.1.1.14 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Lipase_3 | 0.52 | 46.0 | 3.17e-01 | 100.0% | 49.8% |
| 4945010 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.52 | 46.0 | 3.09e-01 | 96.6% | 29.4% |
| 2426538 | 375.1.1.26 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 | 0.52 | 33.0 | 2.97e-01 | 88.8% | 47.9% |
| 5017785 | 2.3.1.0 ↗ | beta barrels › OB-fold › TIMP-like › TIMP-like | 0.52 | 38.0 | 3.52e-01 | 78.7% | 68.7% |
| 5002369 | 243.1.1.0 ↗ | a+b two layers › Cystatin-like › NTF2-like › NTF2-like | 0.51 | 36.0 | 3.40e-01 | 75.3% | 67.8% |
| 3178555 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.50 | 45.0 | 2.67e-01 | 100.0% | 12.9% |
| 3484308 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.50 | 45.0 | 2.86e-01 | 100.0% | 36.8% |