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Secreted_complement_binding_protein_C3b_C4b

Euk-Vir

Raccoonpox_virus

Secreted_complement_binding_protein_C3b_C4b__YP_009143334__Raccoonpox_virus__10256

Identity

Accession:
YP_009143334 ↗
Protein ID:
Secreted_complement_binding_protein_C3b_C4b
Kingdom:
euk

Quality

90.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-78
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00084.27 best Sushi 44.1 3.10e-11 100.0% 100.0%
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3o8eB01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.89 82.0 8.04e-01 100.0% 96.8%
1ok3A01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.88 81.0 7.91e-01 100.0% 93.7%
4b2rA02 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.83 73.0 7.11e-01 100.0% 88.9%
3t5oA03 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.83 73.0 7.16e-01 100.0% 90.3%
3sw0X01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.82 72.0 7.20e-01 100.0% 94.9%
3kxvA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.81 64.0 6.81e-01 87.9% 98.0%
6v06A03 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.79 72.0 7.09e-01 100.0% 96.8%
2rlpA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.79 71.0 6.79e-01 100.0% 89.6%
7nycC01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.79 68.0 6.80e-01 100.0% 94.9%
1hfiA00 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.79 70.0 6.90e-01 100.0% 93.5%
1h03P02 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.79 71.0 6.98e-01 100.0% 96.7%
2xrbA04 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.75 65.0 6.44e-01 100.0% 93.4%
4k12A00 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.74 65.0 6.34e-01 100.0% 89.1%
2wiiC04 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.74 63.0 6.39e-01 100.0% 98.2%
2g7iA02 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.74 65.0 6.29e-01 100.0% 96.9%
2wiiC02 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.72 62.0 6.12e-01 100.0% 93.4%
1ly2A01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.71 62.0 6.00e-01 100.0% 92.3%
4b2rA01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.70 59.0 5.84e-01 100.0% 90.5%
5fo8C02 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.70 60.0 5.93e-01 100.0% 95.1%
2b5iD01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.70 61.0 5.83e-01 100.0% 94.0%
3zd2B01 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.70 58.0 5.80e-01 96.6% 95.1%
6v06A04 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.69 59.0 5.85e-01 100.0% 95.0%
3t5oA04 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.68 60.0 5.87e-01 100.0% 92.1%
5i0qB02 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.67 59.0 5.81e-01 100.0% 93.5%
1g44C04 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.64 44.0 4.73e-01 81.0% 100.0%
4m4pA02 2.60.40.1770 Mainly Beta › Sandwich › Immunoglobulin-like › ephrin a2 ectodomain 0.63 53.0 5.30e-01 100.0% 98.3%
4ng0B00 3.10.430.110 Alpha Beta › Roll › Ribosomal Protein L9; domain 2 › 0.59 45.0 3.87e-01 84.5% 85.4%
3bb8A02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.58 47.0 3.81e-01 100.0% 90.2%
2j73A00 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 45.0 3.95e-01 100.0% 89.3%
2o3oA02 3.30.310.160 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › YycH protein, domain 2 0.56 48.0 3.89e-01 100.0% 65.0%
3da8B00 3.40.50.170 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain 0.56 44.0 3.10e-01 89.7% 78.5%
3fh1A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.56 45.0 3.64e-01 93.1% 87.7%
4h8wC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 39.0 3.72e-01 77.6% 88.0%
4da5A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 45.0 4.11e-01 96.6% 92.8%
1nw1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.55 44.0 3.82e-01 93.1% 94.8%
2oap101 3.30.450.380 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.55 45.0 3.07e-01 93.1% 65.4%
3blzA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 46.0 3.70e-01 100.0% 92.7%
2lqvA00 3.10.450.300 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › YebF/Colicin-M immunity protein 0.55 42.0 3.73e-01 93.1% 81.8%
1uswA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 44.0 2.89e-01 93.1% 50.8%
3oxhA01 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.54 38.0 3.03e-01 82.8% 33.6%
3zx7A02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 39.0 3.14e-01 84.5% 96.4%
1svbA04 2.60.40.350 Mainly Beta › Sandwich › Immunoglobulin-like › 0.53 40.0 3.52e-01 86.2% 82.3%
3a9zA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.53 41.0 3.38e-01 89.7% 83.2%
5w3xD01 2.20.25.80 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › WRKY domain 0.53 43.0 4.23e-01 96.6% 90.8%
1uwyA02 2.60.40.1120 Mainly Beta › Sandwich › Immunoglobulin-like › Carboxypeptidase-like, regulatory domain 0.52 43.0 3.78e-01 100.0% 83.5%
3uaqB02 2.40.160.90 Mainly Beta › Beta Barrel › Porin › 0.52 38.0 2.86e-01 82.8% 61.3%
5hl8C00 3.30.1360.100 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › General secretion pathway protein M, EpsM 0.52 39.0 3.65e-01 86.2% 94.9%
4b63A00 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.51 40.0 2.39e-01 87.9% 37.5%
3uueA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.50 41.0 2.73e-01 96.6% 88.5%
1tvcA01 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 38.0 3.20e-01 86.2% 89.0%
ECOD (71)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4079682 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.94 89.0 8.49e-01 100.0% 92.3%
3748629 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.91 85.0 8.16e-01 100.0% 92.3%
3772962 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.91 82.0 8.14e-01 96.6% 95.0%
4183732 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.90 84.0 8.05e-01 100.0% 92.3%
3898203 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.88 80.0 7.25e-01 100.0% 76.0%
3840927 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.88 81.0 8.06e-01 100.0% 98.3%
3859036 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.87 79.0 7.20e-01 100.0% 76.0%
2482309 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.87 80.0 7.59e-01 100.0% 91.0%
3845472 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.87 79.0 7.34e-01 100.0% 81.4%
3913824 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.87 81.0 7.75e-01 100.0% 90.8%
3626524 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.86 78.0 7.70e-01 100.0% 95.0%
1811351 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.85 77.0 7.44e-01 100.0% 93.8%
3572956 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.83 75.0 7.07e-01 100.0% 90.0%
148598 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.82 72.0 7.02e-01 100.0% 88.9%
3471893 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.79 70.0 6.64e-01 100.0% 92.9%
3411554 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.79 71.0 6.87e-01 100.0% 93.8%
4772241 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.78 70.0 6.49e-01 100.0% 83.3%
3875425 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.78 70.0 6.74e-01 100.0% 89.2%
3864942 389.1.2.0 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.78 68.0 6.60e-01 98.3% 93.8%
3878952 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.78 66.0 6.59e-01 100.0% 93.3%
1088816 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.78 67.0 6.61e-01 100.0% 90.5%
3758042 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.77 69.0 6.22e-01 100.0% 76.2%
8512 389.1.2.0 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.77 69.0 6.24e-01 100.0% 78.2%
3892853 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.77 67.0 6.22e-01 100.0% 97.3%
3880534 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.77 66.0 6.57e-01 100.0% 93.3%
1137409 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.76 66.0 6.42e-01 100.0% 87.7%
3759877 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.76 68.0 6.39e-01 100.0% 92.9%
3870236 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.75 66.0 6.42e-01 100.0% 95.4%
3511888 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.74 66.0 6.41e-01 100.0% 90.8%
3935068 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.74 66.0 6.39e-01 100.0% 93.8%
4201414 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.74 65.0 6.32e-01 100.0% 96.9%
3883692 389.1.2.2 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi_2 0.74 63.0 6.33e-01 98.3% 98.3%
3878190 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.74 64.0 6.22e-01 100.0% 87.7%
3583682 389.1.2.0 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.74 65.0 5.86e-01 100.0% 81.2%
1525517 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.73 60.0 6.01e-01 100.0% 91.7%
3572959 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.72 62.0 6.19e-01 100.0% 96.7%
3531224 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.71 62.0 5.57e-01 98.3% 83.7%
3760262 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.71 61.0 5.82e-01 100.0% 82.9%
3227190 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.71 62.0 6.14e-01 100.0% 96.7%
4532866 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.71 61.0 5.80e-01 100.0% 82.9%
3390825 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.70 62.0 6.02e-01 100.0% 90.8%
3908872 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.69 57.0 5.86e-01 98.3% 100.0%
3624894 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.69 60.0 5.83e-01 100.0% 90.8%
3855121 389.1.2.0 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.69 56.0 5.57e-01 100.0% 90.0%
3574029 389.1.2.0 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.69 59.0 5.76e-01 100.0% 92.3%
3751425 389.1.1.93 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_CRD 0.68 58.0 5.54e-01 98.3% 82.9%
3578357 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.68 57.0 5.60e-01 100.0% 90.8%
3928615 389.1.2.0 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.67 56.0 5.38e-01 100.0% 95.7%
4492969 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.66 57.0 5.50e-01 100.0% 86.2%
3800832 389.1.2.0 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.66 56.0 5.38e-01 100.0% 95.7%
3220980 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.65 56.0 5.55e-01 100.0% 96.7%
3800405 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.64 54.0 5.19e-01 100.0% 90.0%
3927926 389.1.2.0 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain 0.61 51.0 4.99e-01 100.0% 100.0%
3564540 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.60 49.0 4.91e-01 98.3% 100.0%
3579536 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.59 47.0 4.86e-01 93.1% 100.0%
3485051 389.1.1.93 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_CRD 0.58 45.0 4.59e-01 91.4% 100.0%
3585283 389.1.2.1 few secondary structure elements › EGF-like › EGF-related › Complement control module/SCR domain › Sushi 0.58 48.0 4.81e-01 100.0% 96.7%
4101633 243.3.1.5 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › FTP 0.57 48.0 4.00e-01 100.0% 72.7%
3285561 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.56 48.0 3.97e-01 100.0% 71.8%
3968938 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.55 46.0 4.46e-01 93.1% 92.3%
3973036 243.1.1.0 a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.55 46.0 3.34e-01 98.3% 76.2%
3184041 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.55 41.0 3.65e-01 89.7% 88.0%
4679328 389.2.1.0 few secondary structure elements › EGF-like › Serine protease inhibitors › Serine protease inhibitors 0.55 46.0 4.34e-01 94.8% 91.4%
4964086 2004.1.1.1218 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PilB3_C 0.54 45.0 2.65e-01 93.1% 30.5%
3854366 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.54 40.0 3.49e-01 87.9% 93.3%
3431175 243.3.1.0 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.54 45.0 3.88e-01 100.0% 83.0%
3508065 375.4.1.0 few secondary structure elements › Rubredoxin-like › Nucleolar RNA-binding protein Nop10-like › Nucleolar RNA-binding protein Nop10-like 0.53 41.0 3.44e-01 84.5% 82.0%
3290541 243.3.1.3 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › PepSY 0.52 44.0 4.28e-01 98.3% 93.8%
2445212 3946.1.1.1 beta duplicates or obligate multimers › Pleurotolysin B C-terminal domain › Pleurotolysin B C-terminal domain › Pleurotolysin B C-terminal domain › Vps62 0.52 40.0 2.86e-01 87.9% 24.3%
4030391 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.52 40.0 2.72e-01 89.7% 82.6%
3995693 59.1.3.0 beta complex topology › triple barrel › triple barrel › RNA polymerase I subunits A49/A34.5 dimerization domains 0.50 41.0 3.64e-01 96.6% 96.7%
D2 high residues 92-142
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00084.27 best Sushi 33.0 8.70e-08 96.1% 69.6%
D3 high residues 144-199
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00084.27 best Sushi 46.0 7.50e-12 96.4% 100.0%
D4 high residues 211-260
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00084.27 best Sushi 36.1 9.90e-09 92.0% 71.4%