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Secreted_glycoprotein

Euk-Vir

Raccoonpox_virus

Secreted_glycoprotein__YP_009143470__Raccoonpox_virus__10256

Identity

Accession:
YP_009143470 ↗
Protein ID:
Secreted_glycoprotein
Kingdom:
euk

Quality

75.8 mean pLDDT

Taxonomy

Bamfordvirae› Nucleocytoviricota› Pokkesviricetes› Chitovirales› Poxviridae› Orthopoxvirus› Raccoonpox_virus

TaxID: 10256

Cluster

View cluster (92 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 37-135_149-220
PDB
Domain cluster: rep: NFkB_inhibitor__YP_009408124__Eptesipox_virus__1329402__D30-162_189-224
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF02250.21 best Orthopox_35kD 145.8 2.00e-42 98.8% 81.5%
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2vgaA00 2.60.240.10 Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › Major secreted virus protein 0.85 82.0 7.84e-01 100.0% 94.8%
1cq3A00 2.60.240.10 Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › Major secreted virus protein 0.78 75.0 6.70e-01 100.0% 91.1%
3on9A00 2.60.240.20 Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › 0.77 65.0 6.78e-01 100.0% 94.4%
4hkjD00 2.60.240.30 Mainly Beta › Sandwich › Viral Chemokine Inhibitor; Chain A › 0.67 62.0 6.05e-01 100.0% 89.8%
1sc6A03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.67 30.0 4.27e-01 77.8% 87.8%
3ibwA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.67 31.0 4.46e-01 78.9% 94.9%
4frwA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.66 32.0 4.21e-01 83.6% 81.2%
2wp3O00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 24.0 3.15e-01 91.2% 59.8%
2yr3A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 29.0 3.71e-01 85.4% 71.7%
2od4B01 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 32.0 4.46e-01 78.9% 96.6%
2dm7A01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 28.0 3.86e-01 79.5% 84.1%
2b5iB01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.61 32.0 4.13e-01 95.3% 89.4%
1v05A00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.60 30.0 3.82e-01 87.1% 81.2%
1ejfA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 34.0 4.16e-01 95.3% 86.4%
2r4fA03 3.30.70.420 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain 0.59 37.0 4.44e-01 98.2% 93.2%
4uqfA02 3.30.1130.10 Alpha Beta › 2-Layer Sandwich › GTP Cyclohydrolase I, domain 2 › GTP cyclohydrolase I, C-terminal domain/NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal domain 0.58 35.0 3.94e-01 97.7% 76.1%
1hdhA02 3.30.1120.10 Alpha Beta › 2-Layer Sandwich › Arylsulfatase, C-terminal domain › 0.57 24.0 3.61e-01 92.4% 88.3%
4q7aC02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 34.0 4.27e-01 85.4% 95.4%
5xoyB02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.57 34.0 4.23e-01 86.0% 95.3%
1fyhB02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.55 30.0 3.73e-01 85.4% 85.4%
3qugA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.55 26.0 3.10e-01 86.5% 63.7%
4mypA00 2.60.40.1850 Mainly Beta › Sandwich › Immunoglobulin-like › 0.54 27.0 3.19e-01 87.1% 65.3%
2dliA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.54 26.0 3.34e-01 85.4% 78.6%
3ecqA02 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.52 43.0 3.74e-01 88.9% 97.4%
2mraA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.50 30.0 3.46e-01 96.5% 82.9%
ECOD (29)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4855718 527.1.1.1 ↗ beta sandwiches › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Orthopox_35kD 0.86 84.0 7.95e-01 100.0% 93.8%
161466 527.1.1.1 ↗ beta sandwiches › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Orthopox_35kD 0.78 74.0 6.47e-01 100.0% 88.8%
146301 527.1.1.3 ↗ beta sandwiches › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › Soluble secreted chemokine inhibitor, VCCI › CrmD_SECRET 0.77 65.0 6.78e-01 100.0% 94.4%
4513450 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.66 37.0 4.69e-01 88.3% 90.5%
3999603 304.9.1.0 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.65 30.0 3.82e-01 96.5% 73.0%
3578536 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.63 35.0 4.13e-01 94.7% 77.4%
3800797 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.63 35.0 4.11e-01 94.7% 77.4%
3382396 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 28.0 3.96e-01 70.8% 84.7%
3551607 11.1.1.283 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL2RB_N1 0.63 34.0 4.26e-01 93.6% 84.8%
3620547 304.9.1.1 ↗ a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 0.61 29.0 3.61e-01 81.9% 70.0%
3666577 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.59 29.0 3.78e-01 74.9% 81.8%
3734856 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.59 31.0 3.50e-01 84.8% 65.4%
4002671 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.59 30.0 3.91e-01 70.8% 87.4%
3832697 304.8.1.45 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › bHLH-TF_ACT-like_plant 0.57 27.0 3.54e-01 72.5% 78.9%
3399963 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.57 35.0 4.10e-01 84.2% 86.7%
4947596 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.57 30.0 3.64e-01 98.2% 77.3%
4854269 304.4.1.7 ↗ a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Cyclase_polyket 0.56 32.0 3.90e-01 97.1% 89.4%
3308868 304.8.1.0 ↗ a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.55 31.0 3.81e-01 73.1% 86.7%
4008806 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.54 36.0 3.64e-01 95.3% 66.3%
3717095 109.2.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › alpha/alpha toroid › alpha/alpha toroid 0.53 45.0 3.04e-01 93.0% 40.4%
4310932 12.3.1.24 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › YidC_periplas 0.53 44.0 3.89e-01 90.1% 90.2%
5035134 12.1.1.114 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain › DUF2341 0.52 30.0 3.52e-01 91.2% 78.3%
3291429 304.48.1.0 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like 0.52 36.0 3.74e-01 95.3% 74.4%
4927380 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.52 44.0 3.88e-01 93.0% 91.5%
4065140 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.51 43.0 3.69e-01 89.5% 84.0%
3663152 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.51 28.0 3.02e-01 81.3% 60.0%
5010771 12.3.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.51 44.0 3.93e-01 93.6% 97.1%
4957801 12.3.1.40 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › TREH_N 0.51 43.0 4.07e-01 93.0% 93.3%
1322695 12.3.1.3 ↗ beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich › Aldose_epim 0.50 41.0 3.32e-01 84.8% 92.6%