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Serine_protease
Euk-VirPandoravirus_macleodensis
Serine_protease__YP_009480893__Pandoravirus_macleodensis__2107707
Identity
- Accession:
- YP_009480893 ↗
- Protein ID:
- Serine_protease
- Kingdom:
- euk
Quality
71.8
mean pLDDT
Cluster
View cluster (5 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 536-671
D2
medium
residues 73-325_515-532
Domain cluster:
rep: 100_kDa_protein__YP_008130303__Citrus_vein_enation_virus__1301220__D379-571
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00089.33 best | Trypsin | 31.6 | 2.00e-07 | 62.7% | 82.3% |
| PF13365.13 | Trypsin_2 | 56.3 | 8.50e-15 | 54.6% | 99.3% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3otpA01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.86 | 61.0 | 7.11e-01 | 94.5% | 95.1% |
| 4ri0A01 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.85 | 57.0 | 6.76e-01 | 95.9% | 93.4% |
| 1agjA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.82 | 29.0 | 4.38e-01 | 72.3% | 70.9% |
| 5y2dA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.82 | 31.0 | 4.94e-01 | 84.9% | 84.2% |
| 4rqyA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.79 | 33.0 | 5.05e-01 | 85.2% | 88.6% |
| 2ijd101 | 2.40.10.120 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.76 | 49.0 | 5.98e-01 | 75.3% | 96.1% |
| 5eokA05 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.72 | 54.0 | 5.93e-01 | 76.8% | 91.7% |
| 1hpgA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.71 | 26.0 | 4.71e-01 | 71.6% | 100.0% |
| 3h7oB01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.69 | 28.0 | 4.62e-01 | 72.0% | 95.6% |
| 3h8zA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 15.0 | 3.35e-01 | 72.3% | 79.7% |
| 4kkdB04 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.67 | 32.0 | 4.79e-01 | 76.4% | 100.0% |
| 4lk4A01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.60 | 25.0 | 3.53e-01 | 79.0% | 79.2% |
| 3r5lA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.60 | 25.0 | 3.76e-01 | 85.6% | 88.8% |
| 1ywuA00 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.58 | 26.0 | 3.83e-01 | 72.7% | 92.0% |
| 2hq7B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.56 | 25.0 | 3.41e-01 | 79.0% | 77.5% |
| 7ylrA01 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 23.0 | 3.59e-01 | 88.2% | 99.0% |
| 1cqxA02 | 2.40.30.10 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors | 0.54 | 24.0 | 3.65e-01 | 90.4% | 100.0% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 26.0 | 3.57e-01 | 79.0% | 88.9% |
| 2kcaA00 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.51 | 23.0 | 3.39e-01 | 99.6% | 98.2% |
| 1wi1A01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 20.0 | 2.94e-01 | 74.9% | 81.1% |
ECOD (77)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4028467 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.85 | 64.0 | 6.36e-01 | 85.6% | 74.5% |
| 5063188 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.85 | 58.0 | 6.61e-01 | 76.0% | 87.9% |
| 3464880 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.84 | 59.0 | 6.68e-01 | 76.8% | 89.3% |
| None | — | 0.84 | 59.0 | 6.69e-01 | 76.8% | 90.2% | |
| None | — | 0.83 | 58.0 | 6.61e-01 | 76.8% | 90.1% | |
| 1096110 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.83 | 59.0 | 6.65e-01 | 76.8% | 90.3% |
| 4620869 | 1.1.5.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Mycop_pep_DUF31 | 0.83 | 63.0 | 5.68e-01 | 77.1% | 94.3% |
| None | — | 0.83 | 59.0 | 6.62e-01 | 76.8% | 89.9% | |
| 5023947 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.82 | 50.0 | 6.32e-01 | 78.6% | 96.5% |
| 4247805 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.82 | 57.0 | 6.46e-01 | 77.1% | 90.0% |
| 4031177 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.81 | 57.0 | 6.42e-01 | 77.1% | 89.3% |
| 3493511 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.81 | 63.0 | 6.80e-01 | 85.6% | 91.5% |
| 4387060 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.81 | 56.0 | 6.37e-01 | 78.2% | 89.3% |
| None | — | 0.80 | 56.0 | 6.44e-01 | 78.2% | 91.4% | |
| 3377696 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.80 | 57.0 | 6.60e-01 | 77.1% | 97.0% |
| 3280223 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.80 | 55.0 | 6.49e-01 | 83.4% | 96.4% |
| 3650249 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.79 | 67.0 | 7.10e-01 | 86.3% | 95.5% |
| 2512790 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.79 | 56.0 | 5.98e-01 | 94.5% | 80.5% |
| 4883897 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.79 | 56.0 | 5.97e-01 | 94.5% | 80.3% |
| 3415399 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.78 | 58.0 | 6.58e-01 | 87.8% | 95.3% |
| 3989070 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.78 | 59.0 | 6.63e-01 | 76.8% | 95.9% |
| 3409675 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.78 | 58.0 | 6.46e-01 | 79.7% | 92.7% |
| 2472950 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.78 | 50.0 | 6.12e-01 | 75.3% | 94.6% |
| 3420315 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.77 | 53.0 | 6.21e-01 | 76.4% | 94.0% |
| 3435448 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.77 | 58.0 | 6.26e-01 | 76.8% | 95.4% |
| 22087 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.77 | 55.0 | 5.84e-01 | 94.1% | 80.0% |
| 3428386 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.77 | 60.0 | 6.32e-01 | 88.2% | 86.8% |
| 3226622 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.77 | 58.0 | 5.53e-01 | 76.8% | 84.9% |
| 3277840 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.76 | 54.0 | 6.28e-01 | 84.1% | 95.6% |
| 134809 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.76 | 59.0 | 6.41e-01 | 78.2% | 96.1% |
| 3870478 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.76 | 57.0 | 5.87e-01 | 76.8% | 83.7% |
| 3278337 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.76 | 54.0 | 6.34e-01 | 83.4% | 99.0% |
| 4250509 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.76 | 57.0 | 5.69e-01 | 76.8% | 85.4% |
| 3236876 | 1.1.5.49 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 | 0.76 | 57.0 | 5.71e-01 | 76.8% | 88.1% |
| 4652006 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.76 | 58.0 | 5.81e-01 | 77.9% | 89.1% |
| 3561778 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 57.0 | 5.92e-01 | 77.1% | 90.6% |
| 3682203 | 1.1.17.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 | 0.75 | 53.0 | 6.14e-01 | 85.6% | 94.6% |
| 4164884 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 57.0 | 6.01e-01 | 77.1% | 89.8% |
| 3535535 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 57.0 | 6.00e-01 | 77.1% | 98.8% |
| 22055 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 51.0 | 6.14e-01 | 75.3% | 98.4% |
| 4557948 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.75 | 56.0 | 5.74e-01 | 76.8% | 87.9% |
| 3890063 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 57.0 | 5.83e-01 | 78.2% | 86.0% |
| 3407383 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 56.0 | 5.78e-01 | 76.8% | 92.7% |
| 4614564 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 49.0 | 5.77e-01 | 75.6% | 91.8% |
| 3490463 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 56.0 | 5.92e-01 | 76.8% | 93.0% |
| 3469033 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.74 | 60.0 | 6.26e-01 | 83.0% | 94.0% |
| 1826904 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 57.0 | 5.97e-01 | 78.2% | 86.7% |
| 3910699 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.74 | 56.0 | 5.54e-01 | 77.5% | 86.7% |
| 3403377 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.73 | 56.0 | 5.85e-01 | 77.5% | 89.2% |
| 3502149 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.73 | 55.0 | 5.56e-01 | 76.8% | 87.8% |
| 3403363 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.73 | 55.0 | 5.61e-01 | 76.8% | 90.2% |
| 134808 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.73 | 59.0 | 6.37e-01 | 96.3% | 95.7% |
| 3816594 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.72 | 60.0 | 6.34e-01 | 84.1% | 98.3% |
| 3447771 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.72 | 58.0 | 6.23e-01 | 95.2% | 93.3% |
| 3216440 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.72 | 55.0 | 5.61e-01 | 76.8% | 92.7% |
| 3401129 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.72 | 55.0 | 5.96e-01 | 78.2% | 97.9% |
| 3546733 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.72 | 55.0 | 5.72e-01 | 77.1% | 86.8% |
| 4254177 | 1.1.5.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin | 0.72 | 55.0 | 5.16e-01 | 77.1% | 72.1% |
| 3234951 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.72 | 54.0 | 5.69e-01 | 76.8% | 92.8% |
| 3969197 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.71 | 58.0 | 5.95e-01 | 95.2% | 85.7% |
| 3615787 | 1.1.17.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 | 0.71 | 52.0 | 5.72e-01 | 77.9% | 89.3% |
| 3229867 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.71 | 54.0 | 5.51e-01 | 76.8% | 92.3% |
| 3598734 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.71 | 54.0 | 5.77e-01 | 77.1% | 89.4% |
| 3404225 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.71 | 52.0 | 5.90e-01 | 77.1% | 96.2% |
| 3783835 | 1.1.5.33 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 | 0.70 | 60.0 | 6.08e-01 | 88.2% | 89.1% |
| 3899014 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.70 | 53.0 | 5.84e-01 | 77.1% | 99.6% |
| 3232599 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.69 | 57.0 | 5.86e-01 | 95.2% | 87.7% |
| 3403314 | 1.1.5.46 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF1986 | 0.69 | 50.0 | 5.65e-01 | 77.5% | 93.4% |
| 3220497 | 1.1.17.8 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 | 0.69 | 49.0 | 5.43e-01 | 76.8% | 88.6% |
| 3565221 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.68 | 57.0 | 5.87e-01 | 93.7% | 89.6% |
| 3855145 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.66 | 57.0 | 5.76e-01 | 94.5% | 89.0% |
| 4655762 | 1.1.17.21 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_S55 | 0.65 | 46.0 | 5.30e-01 | 72.0% | 99.0% |
| 3400560 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.65 | 54.0 | 5.66e-01 | 95.6% | 93.6% |
| 3508588 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.64 | 57.0 | 5.80e-01 | 97.8% | 93.6% |
| 3509860 | 1.1.17.1 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin | 0.64 | 56.0 | 5.62e-01 | 94.8% | 90.0% |
| 3966602 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.60 | 25.0 | 3.78e-01 | 78.2% | 88.3% |
| 3600139 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 20.0 | 2.93e-01 | 74.2% | 77.3% |
D3
medium
residues 387-403_467-514
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2l97A01 | 2.30.42.10 | Mainly Beta › Roll › Pdz3 Domain › PDZ domain | 0.59 | 52.0 | 4.55e-01 | 100.0% | 74.7% |
| 3syjA02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.53 | 47.0 | 2.72e-01 | 100.0% | 24.1% |
| 1l1lA01 | 3.20.70.20 | Alpha Beta › Alpha-Beta Barrel › Anaerobic Ribonucleotide-triphosphate Reductase Large Chain › | 0.51 | 36.0 | 2.19e-01 | 76.9% | 82.0% |
| 5axmB00 | 3.30.70.3000 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › tRNA(His) guanylyltransferase (Thg1) | 0.51 | 45.0 | 3.06e-01 | 100.0% | 72.0% |
| 1y96D00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.50 | 35.0 | 3.24e-01 | 96.9% | 56.6% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4030031 | 7.1.1.0 ↗ | beta barrels › PDZ domain › PDZ domain › PDZ domain | 0.71 | 64.0 | 5.33e-01 | 100.0% | 69.1% |
| 5027545 | 2499.1.1.1 ↗ | a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like › Peptidase_S8 | 0.60 | 47.0 | 3.11e-01 | 86.2% | 41.5% |
| 3827285 | 11.1.4.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like | 0.56 | 34.0 | 3.63e-01 | 95.4% | 69.1% |
| 3814307 | 387.1.5.51 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Scorpion toxin-like › PF30538 | 0.51 | 28.0 | 3.50e-01 | 100.0% | 92.1% |
| 3229699 | 384.1.1.1 ↗ | few secondary structure elements › BPTI-like › BPTI-like › BPTI-like › Kunitz_BPTI | 0.51 | 32.0 | 3.01e-01 | 98.5% | 50.0% |
D4
medium
residues 404-466
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8f5pE01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.52 | 45.0 | 2.77e-01 | 100.0% | 29.6% |
| 6mvtA03 | 3.40.605.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aldehyde Dehydrogenase; Chain A, domain 1 › Aldehyde Dehydrogenase; Chain A, domain 1 | 0.51 | 40.0 | 2.73e-01 | 90.5% | 51.4% |
| 3oc2A01 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.50 | 37.0 | 2.76e-01 | 81.0% | 87.3% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3785807 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.64 | 55.0 | 4.31e-01 | 98.4% | 71.2% |
| 3931788 | 375.1.1.89 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › zf-LITAF-like | 0.58 | 42.0 | 3.97e-01 | 79.4% | 67.1% |
| 2526896 | 3917.1.1.2 ↗ | a+b complex topology › Middle domain in PB2 › Middle domain in PB2 › Middle domain in PB2 › Flu_PB2_3rd | 0.58 | 40.0 | 3.10e-01 | 73.0% | 51.4% |
| 4999117 | 331.2.1.1 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain › PGM_PMM_IV | 0.54 | 36.0 | 3.22e-01 | 71.4% | 86.3% |
| 3240985 | 7579.1.1.97 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Abhydrolase_1, EHN | 0.53 | 42.0 | 2.64e-01 | 92.1% | 63.3% |
| 3786192 | 2004.1.1.74 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1,YGR210-like_G4 | 0.53 | 42.0 | 2.74e-01 | 88.9% | 46.5% |
| 3598911 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 36.0 | 2.45e-01 | 73.0% | 29.8% |
| 4028879 | 5089.1.1.2 ↗ | beta complex topology › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › Membrane attack complex/perforin (MACPF) and cholesterol-dependent cytolysin (CDC) domains › MACPF | 0.51 | 41.0 | 2.68e-01 | 95.2% | 58.3% |
| 5016339 | 210.1.3.4 ↗ | a+b four layers › Ntn/PP2C › Ntn › Class II glutamine amidotransferases › GATase_6 | 0.51 | 37.0 | 2.54e-01 | 77.8% | 34.8% |
| 3274737 | 2004.1.1.597 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › MMR_HSR1, FeoB_N, YGR210-like_G4 | 0.51 | 39.0 | 2.58e-01 | 84.1% | 38.0% |
| 3651076 | 2011.2.1.16 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › DUF7894 | 0.50 | 36.0 | 2.50e-01 | 77.8% | 77.9% |