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Serpin_1
Euk-VirEptesipox_virus
Serpin_1__YP_009408115__Eptesipox_virus__1329402
Identity
- Accession:
- YP_009408115 ↗
- Protein ID:
- Serpin_1
- Kingdom:
- euk
Quality
90.5
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Vespertilionpoxvirus›
Eptesipox_virus
TaxID: 1329402
Cluster
View cluster (68 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-137_237-300
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00079.26 best | Serpin | 77.0 | 2.30e-21 | 68.7% | 43.5% |
| PF00079.26 | Serpin | 38.8 | 9.70e-10 | 31.8% | 16.2% |
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2h4pA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.95 | 92.0 | 8.41e-01 | 99.5% | 95.2% |
| 5inwA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.95 | 86.0 | 8.23e-01 | 92.5% | 95.0% |
| 1mtpA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.94 | 91.0 | 8.66e-01 | 99.5% | 96.9% |
| 3ndaA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.94 | 91.0 | 8.41e-01 | 100.0% | 95.9% |
| 4p0fA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.93 | 84.0 | 8.10e-01 | 92.5% | 95.9% |
| 1jrrA02 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.93 | 84.0 | 8.10e-01 | 92.5% | 97.3% |
| 1attB02 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.92 | 83.0 | 7.50e-01 | 92.5% | 88.0% |
| 1c8oA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.91 | 74.0 | 8.16e-01 | 90.0% | 100.0% |
| 1ovaA02 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.89 | 79.0 | 7.40e-01 | 91.5% | 97.4% |
| 1wz9A01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.89 | 79.0 | 7.60e-01 | 92.0% | 96.8% |
| 2r9yA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.87 | 78.0 | 7.58e-01 | 93.0% | 94.1% |
| 3le2A01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.87 | 77.0 | 7.26e-01 | 92.5% | 95.3% |
| 3f1sA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.87 | 77.0 | 7.27e-01 | 92.5% | 91.9% |
| 1jmoA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.86 | 76.0 | 7.27e-01 | 91.5% | 95.6% |
| 5c98A01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.86 | 77.0 | 7.43e-01 | 92.5% | 96.8% |
| 3pzfA02 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.85 | 67.0 | 6.95e-01 | 81.6% | 100.0% |
| 4dteA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.85 | 67.0 | 6.95e-01 | 81.6% | 94.7% |
| 3stoA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.85 | 75.0 | 7.23e-01 | 92.5% | 98.7% |
| 1imvA02 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.84 | 73.0 | 7.28e-01 | 90.0% | 95.6% |
| 4if8B01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.84 | 77.0 | 6.89e-01 | 96.0% | 90.3% |
| 4dy0B01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.84 | 67.0 | 6.83e-01 | 81.6% | 94.8% |
| 1i99I01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.83 | 66.0 | 6.80e-01 | 81.6% | 94.8% |
| 4au2B01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.82 | 73.0 | 7.09e-01 | 93.5% | 93.7% |
| 4r9iA01 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.81 | 74.0 | 6.53e-01 | 96.0% | 92.1% |
| 2wxwA02 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.77 | 62.0 | 6.14e-01 | 83.6% | 99.5% |
| 3ozqA02 | 3.30.497.10 | Alpha Beta › 2-Layer Sandwich › Antithrombin; Chain I, domain 2 › Antithrombin, subunit I, domain 2 | 0.76 | 63.0 | 6.68e-01 | 85.6% | 100.0% |
| 1pzdA02 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.54 | 24.0 | 3.03e-01 | 92.5% | 66.1% |
| 1vjhA00 | 3.30.530.20 | Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain | 0.52 | 23.0 | 2.83e-01 | 92.0% | 62.5% |
| 3djwA00 | 3.30.160.300 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.51 | 23.0 | 3.36e-01 | 89.6% | 91.6% |
| 4acvA00 | 3.30.2000.30 | Alpha Beta › 2-Layer Sandwich › STM4215-like › | 0.50 | 29.0 | 3.58e-01 | 86.1% | 92.4% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4768829 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.94 | 91.0 | 7.55e-01 | 99.5% | 97.8% |
| 2332800 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.94 | 92.0 | 7.42e-01 | 100.0% | 97.3% |
| 4785457 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.94 | 91.0 | 7.51e-01 | 99.5% | 100.0% |
| 154136 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.94 | 91.0 | 7.09e-01 | 100.0% | 87.2% |
| 1289420 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.94 | 91.0 | 7.18e-01 | 100.0% | 87.0% |
| 4783841 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.94 | 88.0 | 7.36e-01 | 96.5% | 100.0% |
| 2709787 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.94 | 90.0 | 7.15e-01 | 99.0% | 87.0% |
| 141145 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.94 | 91.0 | 7.11e-01 | 100.0% | 88.2% |
| 3937095 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.92 | 88.0 | 6.95e-01 | 98.5% | 87.0% |
| 4767909 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.92 | 85.0 | 7.25e-01 | 94.5% | 100.0% |
| 4539644 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.92 | 85.0 | 6.82e-01 | 96.0% | 96.1% |
| 3501867 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.89 | 83.0 | 4.99e-01 | 96.0% | 31.9% |
| 3404796 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.88 | 81.0 | 6.45e-01 | 96.0% | 96.5% |
| 2410174 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.88 | 84.0 | 7.20e-01 | 98.5% | 100.0% |
| 86484 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.87 | 80.0 | 6.54e-01 | 96.0% | 94.2% |
| 4632151 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.87 | 80.0 | 6.35e-01 | 96.0% | 96.0% |
| 4492961 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.87 | 80.0 | 6.33e-01 | 96.0% | 94.9% |
| 3409432 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.87 | 80.0 | 6.23e-01 | 96.0% | 92.3% |
| 3884771 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.86 | 80.0 | 6.27e-01 | 96.0% | 94.7% |
| 3405995 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.86 | 80.0 | 6.19e-01 | 96.0% | 92.4% |
| 2077183 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.86 | 79.0 | 6.30e-01 | 96.0% | 96.2% |
| 3917472 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.86 | 79.0 | 6.22e-01 | 96.0% | 91.1% |
| 1883933 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.86 | 79.0 | 6.24e-01 | 96.0% | 91.5% |
| 86481 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.86 | 79.0 | 6.25e-01 | 96.0% | 94.9% |
| 3777341 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.86 | 79.0 | 6.19e-01 | 96.0% | 89.4% |
| 166524 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.86 | 79.0 | 6.29e-01 | 96.0% | 91.8% |
| 3899510 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.85 | 79.0 | 6.20e-01 | 96.0% | 94.7% |
| 7648 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.85 | 79.0 | 6.22e-01 | 96.0% | 91.5% |
| 86478 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.85 | 79.0 | 5.99e-01 | 96.0% | 85.7% |
| 2756179 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.85 | 79.0 | 6.20e-01 | 96.0% | 91.5% |
| 3551648 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.85 | 78.0 | 6.14e-01 | 96.0% | 92.7% |
| 3843221 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.84 | 77.0 | 6.06e-01 | 96.0% | 96.4% |
| 1885705 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.84 | 77.0 | 6.22e-01 | 96.0% | 94.4% |
| 3621630 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.84 | 77.0 | 6.15e-01 | 95.0% | 84.2% |
| 3770064 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.84 | 77.0 | 6.09e-01 | 96.0% | 94.9% |
| 3957979 | 4059.1.1.0 ↗ | a+b complex topology › Serpins › Serpins › Serpins | 0.83 | 80.0 | 6.67e-01 | 100.0% | 94.3% |
| 3403800 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.82 | 75.0 | 5.98e-01 | 96.0% | 92.6% |
| 4067074 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.81 | 74.0 | 5.88e-01 | 96.0% | 95.3% |
| 3402664 | 4059.1.1.1 ↗ | a+b complex topology › Serpins › Serpins › Serpins › Serpin | 0.73 | 66.0 | 5.45e-01 | 96.0% | 94.6% |
| 3425333 | 331.3.1.40 ↗ | a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DUF1997 | 0.53 | 30.0 | 3.04e-01 | 100.0% | 55.9% |
D2
high
residues 144-234
Domain cluster:
rep: serpin_family_protein__YP_009177040__Turkeypox_virus__336486__D146-226_293-317
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00079.26 best | Serpin | 69.9 | 3.40e-19 | 100.0% | 24.9% |