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Sigma_B
Euk-VirMahlapitsi_orthoreovirus
Sigma_B__YP_009246473__Mahlapitsi_orthoreovirus__2170064
Identity
- Accession:
- YP_009246473 ↗
- Protein ID:
- Sigma_B
- Kingdom:
- euk
Quality
69.5
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 96-302
D2
medium
residues 1-95_305-333
Domain cluster:
rep: VP7__YP_001837104__American_grass_carp_reovirus__465447__D1-99_213-261
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00979.23 best | Reovirus_cap | 104.1 | 1.30e-29 | 98.4% | 30.2% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fn9A01 | 3.90.1630.10 | Alpha Beta › Alpha-Beta Complex › Outer-capsid protein sigma 3, small lobe › Outer-capsid protein sigma 3, small lobe | 0.87 | 80.0 | 7.66e-01 | 100.0% | 85.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7595 | 856.1.1.1 ↗ | a+b complex topology › Outer capsid protein sigma 3-related › Outer capsid protein sigma 3-related › Outer capsid protein sigma 3-related › Reovirus_cap | 0.86 | 82.0 | 5.65e-01 | 100.0% | 86.6% |
| 85697 | 856.1.1.0 ↗ | a+b complex topology › Outer capsid protein sigma 3-related › Outer capsid protein sigma 3-related › Outer capsid protein sigma 3-related | 0.86 | 81.0 | 5.62e-01 | 100.0% | 86.6% |
| 4000562 | 376.1.6.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › IBR domain › IBR | 0.58 | 25.0 | 3.38e-01 | 84.7% | 76.7% |