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Structural_protein

Euk-Vir

Murid_betaherpesvirus_1

Structural_protein__YP_214104__Murid_betaherpesvirus_1__10366

Identity

Accession:
YP_214104 ↗
Protein ID:
Structural_protein
Kingdom:
euk

Quality

72.8 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Muromegalovirus› Murid_betaherpesvirus_1

TaxID: 10366

Cluster

View cluster (76 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 52-68_80-91_163-184_233-271
PDB
Domain cluster: rep: putative_viron_protein__NP_050255__Human_betaherpesvirus_6B__32604__D63-87_177-199_238-289
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01763.23 best Herpes_UL6 30.0 2.80e-07 54.4% 5.9%
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.73 25.0 3.27e-01 85.6% 51.9%
1igqB00 2.30.30.150 Mainly Beta › Roll › SH3 type barrels. › KorB, C-terminal domain 0.55 26.0 3.28e-01 100.0% 71.9%
1yw5A01 2.20.70.10 Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › 0.52 33.0 3.77e-01 80.0% 90.5%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4058174 4.1.1.97 ↗ beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.77 27.0 3.16e-01 87.8% 44.6%
4997767 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.74 26.0 3.75e-01 86.7% 64.4%
4950396 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 25.0 3.11e-01 86.7% 50.9%
5044200 289.1.1.0 ↗ a+b complex topology › Peptide deformylase › Peptide deformylase › Peptide deformylase 0.52 36.0 3.00e-01 72.2% 90.9%
4932368 2005.1.1.17 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1f 0.51 39.0 2.84e-01 82.2% 99.6%
4996063 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 34.0 3.87e-01 90.0% 95.4%
4957409 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 26.0 3.18e-01 95.6% 82.0%
3671986 4.1.1.238 ↗ beta barrels › SH3 › SH3 › SH3 › KOW5_SPT5 0.50 27.0 3.02e-01 95.6% 64.3%
D2 medium residues 92-124_566-612
PDB
Domain cluster: representative
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1h7cA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 41.0 3.76e-01 97.5% 38.8%
3q23A08 1.20.140.110 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › 0.75 42.0 3.34e-01 100.0% 28.6%
1hwyA03 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 48.0 3.28e-01 81.2% 89.8%
2p0tA02 1.10.60.30 Mainly Alpha › Orthogonal Bundle › Diphtheria Toxin Repressor; domain 2 › PSPTO4464-like domains 0.57 27.0 2.91e-01 72.5% 51.4%
6pnjL00 1.20.1240.10 Mainly Alpha › Up-down Bundle › Photosystem 1 Reaction Centre Subunit Xi; Chain: L; › Photosystem I PsaL, reaction centre subunit XI 0.55 41.0 3.24e-01 77.5% 69.2%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.51 38.0 3.14e-01 81.2% 81.6%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4940500 5058.1.1.16 ↗ alpha bundles › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › Mechanosensitive channel protein MscS (YggB), transmembrane region › MS_channel_1st_1 0.75 39.0 3.44e-01 98.8% 35.7%
3940302 109.54.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › Utp12 0.61 50.0 4.08e-01 91.3% 52.7%
3411253 109.4.1.1366 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DOCK_C-D_N, PF28208 0.56 46.0 2.78e-01 88.7% 14.7%
3997012 604.30.1.1 ↗ alpha bundles › Spectrin repeat-like › Gamma-secretase subunit PEN-2 › Gamma-secretase subunit PEN-2 › PEN-2 0.56 47.0 4.45e-01 91.3% 77.9%
3618195 109.1.1.1 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C 0.52 38.0 3.14e-01 83.7% 75.3%
4029190 2004.1.1.30 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.51 41.0 2.78e-01 87.5% 95.3%
5023530 4957.1.1.0 ↗ a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit 0.51 36.0 4.12e-01 77.5% 100.0%
D3 medium residues 125-162_185-232
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2efeA01 1.10.246.120 Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › 0.73 52.0 5.33e-01 74.4% 93.8%
6p73A02 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.71 53.0 4.42e-01 77.9% 58.7%
2odmA00 1.10.287.750 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like 0.66 49.0 5.11e-01 77.9% 96.2%
1oahA02 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.64 48.0 4.03e-01 77.9% 52.8%
2uubT00 1.20.58.110 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Ribosomal protein S20 0.64 56.0 5.35e-01 95.3% 82.8%
1yhuB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.61 44.0 3.70e-01 75.6% 87.5%
2c0kB00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.59 42.0 3.56e-01 74.4% 89.3%
1dkxA02 1.20.1270.10 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.59 41.0 4.29e-01 72.1% 85.0%
3rmiA00 1.20.59.10 Mainly Alpha › Up-down Bundle › Chorismate Mutase Domain, subunit A › Chorismate mutase 0.58 50.0 4.73e-01 97.7% 87.6%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.55 48.0 4.47e-01 97.7% 100.0%
2a2jA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.55 38.0 2.91e-01 72.1% 96.1%
2datA00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.54 37.0 3.29e-01 70.9% 66.7%
3vkgA18 1.10.8.720 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Region D6 of dynein motor 0.53 38.0 3.11e-01 75.6% 89.6%
2nsfA01 1.20.120.450 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain 0.52 40.0 3.32e-01 83.7% 56.6%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3295115 633.24.1.2 ↗ alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › DUF5601 0.75 53.0 5.25e-01 73.3% 84.4%
4476814 192.2.1.76 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › MBOAT 0.72 62.0 4.87e-01 96.5% 95.7%
4646569 4994.1.1.1 ↗ alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like › DUF1507 0.70 51.0 4.98e-01 76.7% 86.3%
4810000 4250.1.1.1 ↗ alpha bundles › Duffy-binding-like domain, N-terminal subdomain › Duffy-binding-like domain, N-terminal subdomain › Duffy-binding-like domain, N-terminal subdomain › Duffy_binding 0.70 49.0 4.00e-01 72.1% 89.0%
3807085 604.3.1.1 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.69 51.0 5.19e-01 77.9% 96.5%
4277373 4994.1.1.1 ↗ alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like › DUF1507 0.69 49.0 4.82e-01 74.4% 83.9%
3461370 604.3.1.0 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain 0.68 50.0 5.07e-01 77.9% 97.6%
4247950 4994.1.1.1 ↗ alpha duplicates or obligate multimers › EF2458-like › EF2458-like › EF2458-like › DUF1507 0.67 53.0 5.13e-01 84.9% 90.5%
5053821 4953.1.1.0 ↗ beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like 0.66 47.0 4.47e-01 74.4% 65.0%
3497022 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.65 59.0 3.90e-01 96.5% 61.6%
4095914 604.9.1.1 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.64 53.0 5.47e-01 95.3% 98.8%
3938350 604.1.1.67 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_5 0.63 48.0 4.52e-01 81.4% 94.3%
3948171 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.61 42.0 3.87e-01 70.9% 65.5%
4524825 604.9.1.1 ↗ alpha bundles › Spectrin repeat-like › Ribosomal protein S20 › Ribosomal protein S20 › Ribosomal_S20p 0.61 51.0 5.04e-01 96.5% 95.8%
4574041 4967.1.1.0 ↗ alpha bundles › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases › helical bundle domain in reverse transcriptase-like polymerases 0.60 43.0 3.51e-01 76.7% 42.9%
4996192 5057.1.1.0 ↗ alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore 0.59 43.0 3.71e-01 75.6% 50.4%
3236284 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.59 43.0 4.51e-01 76.7% 98.8%
3954514 604.5.1.61 ↗ alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) › PF30641 0.59 45.0 4.34e-01 82.6% 85.7%
3375600 604.3.1.1 ↗ alpha bundles › Spectrin repeat-like › BAG domain › BAG domain › BAG 0.57 43.0 4.28e-01 81.4% 95.6%
3582393 5050.1.1.0 ↗ alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter 0.56 38.0 3.00e-01 70.9% 47.6%
3284612 604.10.1.10 ↗ alpha bundles › Spectrin repeat-like › Enzyme IIa from lactose specific PTS, IIa-lac › Enzyme IIa from lactose specific PTS, IIa-lac › PF30641 0.56 47.0 4.51e-01 93.0% 95.0%
3601419 606.1.1.0 ↗ alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain 0.56 50.0 4.45e-01 98.8% 70.0%
3981020 2007.5.1.1 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL 0.53 46.0 3.06e-01 95.3% 36.2%
D4 medium residues 272-371_494-520
PDB
Domain cluster: representative
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF01763.23 best Herpes_UL6 124.0 9.10e-36 80.3% 18.1%
PF01763.23 Herpes_UL6 32.1 6.20e-08 22.1% 4.9%
CATH (36)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2wyhB04 1.20.1270.50 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Glycoside hydrolase family 38, central domain 0.68 33.0 3.64e-01 94.5% 56.4%
6kmjA00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.68 30.0 3.25e-01 100.0% 48.2%
5pg1A00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.67 30.0 3.21e-01 100.0% 47.0%
1zpyA00 6.10.140.1960 Special › Helix non-globular › Helix Hairpins › 0.67 37.0 4.29e-01 92.1% 74.7%
4mh6A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.67 47.0 4.30e-01 94.5% 56.6%
1i6zA00 1.20.58.120 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain 0.63 37.0 3.70e-01 96.1% 55.6%
1s35A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 33.0 3.63e-01 92.1% 62.4%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.62 37.0 4.63e-01 92.9% 100.0%
3ck6C02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.62 38.0 3.97e-01 97.6% 65.5%
1s35A02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.62 35.0 3.81e-01 92.9% 64.5%
3uumA00 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.61 42.0 4.36e-01 89.8% 73.8%
1uurA01 1.20.58.240 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › STAT; domain 1 0.61 37.0 3.99e-01 89.8% 70.0%
1u7lA02 1.20.1460.10 Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 0.60 42.0 3.67e-01 95.3% 49.2%
1zhcA00 6.10.280.50 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.60 32.0 3.95e-01 91.3% 84.2%
5wp3B00 1.10.132.20 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor 0.60 35.0 3.92e-01 92.9% 72.5%
6qumQ00 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.60 33.0 4.14e-01 93.7% 91.9%
4egwA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.59 38.0 3.96e-01 92.9% 68.9%
3pe0A01 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.59 34.0 3.78e-01 94.5% 70.3%
1vctA01 1.20.58.220 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 0.59 34.0 3.63e-01 89.0% 64.2%
2jifA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.58 38.0 3.55e-01 91.3% 53.9%
4i1eA03 1.25.10.30 Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain 0.58 34.0 3.37e-01 93.7% 54.0%
3m9vA03 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.56 36.0 3.36e-01 93.7% 51.6%
1qdbA02 1.20.140.10 Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 0.55 32.0 3.16e-01 87.4% 51.0%
3l8rA00 1.20.58.80 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit 0.54 31.0 3.41e-01 93.7% 67.6%
8gccA03 1.10.268.10 Mainly Alpha › Orthogonal Bundle › Topoisomerase; domain 3 › Topoisomerase, domain 3 0.54 26.0 2.93e-01 74.8% 58.7%
2ap3A00 1.20.120.570 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › YkyA-like 0.53 42.0 3.71e-01 85.8% 97.4%
2b5uA02 1.10.287.620 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix Hairpins 0.52 47.0 4.31e-01 95.3% 77.0%
3rkgA02 1.20.58.340 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Magnesium transport protein CorA, transmembrane region 0.52 38.0 3.50e-01 92.1% 58.5%
6xj1A01 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.52 41.0 3.34e-01 93.7% 44.1%
2ch7A00 1.10.287.950 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Methyl-accepting chemotaxis protein 0.52 46.0 3.39e-01 94.5% 50.5%
3vbbE01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.51 40.0 4.15e-01 96.1% 87.4%
1fpoC02 1.20.1280.20 Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain 0.51 27.0 3.11e-01 81.9% 69.2%
2uv8A07 6.10.140.1410 Special › Helix non-globular › Helix Hairpins › 0.51 30.0 3.50e-01 91.3% 84.7%
3vkgA12 1.10.287.2610 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.51 44.0 3.71e-01 94.5% 60.9%
4o8sA02 1.20.58.1790 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › JHP933, helical tail domain 0.51 29.0 3.16e-01 86.6% 67.3%
3k29A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.50 44.0 4.07e-01 94.5% 81.4%
ECOD (45)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3622615 604.1.1.172 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › 7TM_GPCR_Srx 0.75 40.0 4.43e-01 96.1% 63.8%
3776686 633.6.1.0 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like 0.64 37.0 3.76e-01 93.7% 56.2%
4595958 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.64 39.0 4.18e-01 92.9% 70.0%
4959990 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.63 39.0 3.93e-01 89.0% 60.8%
3245526 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.63 32.0 3.49e-01 95.3% 57.1%
3756535 604.1.1.5 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › Spectrin_3 0.62 37.0 3.88e-01 93.7% 64.3%
3609510 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.62 44.0 3.87e-01 94.5% 50.3%
3177545 604.12.1.0 ↗ alpha bundles › Spectrin repeat-like › MIT domain › MIT domain 0.61 35.0 3.53e-01 92.1% 55.2%
3505493 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.61 38.0 3.85e-01 89.8% 62.4%
3473740 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.60 38.0 3.16e-01 88.2% 35.2%
3412062 603.1.1.19 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin-18_N 0.60 40.0 3.12e-01 98.4% 33.3%
3616669 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.60 40.0 4.16e-01 90.6% 73.9%
4948369 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.59 38.0 3.73e-01 92.1% 59.4%
4205503 5001.1.1.0 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like 0.59 36.0 3.17e-01 95.3% 41.1%
3958574 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.59 38.0 3.51e-01 93.7% 50.9%
3551963 601.19.1.23 ↗ alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Tektin 0.58 45.0 4.04e-01 95.3% 58.9%
3543620 604.1.1.95 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › KIAA1755_C 0.58 31.0 3.57e-01 89.0% 68.4%
3701873 191.1.1.0 ↗ alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain 0.58 31.0 3.30e-01 92.9% 59.1%
3882066 3291.1.1.124 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Bap31 0.58 36.0 3.32e-01 94.5% 47.3%
3913281 3755.3.1.123 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › Tektin 0.57 42.0 3.88e-01 94.5% 60.0%
3809724 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.57 38.0 3.68e-01 93.7% 60.7%
3987415 601.1.1.11 ↗ alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › EcsB 0.57 31.0 2.88e-01 92.1% 42.9%
3245542 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.56 36.0 3.74e-01 93.7% 67.5%
3503307 1203.1.2.1 ↗ alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › ASD2 0.56 41.0 3.80e-01 96.9% 60.0%
3970010 633.6.1.0 ↗ alpha bundles › Bromodomain-like › Acyl-CoA dehydrogenase C-terminal domain-like › Acyl-CoA dehydrogenase C-terminal domain-like 0.55 35.0 3.34e-01 92.1% 54.7%
3586751 4177.1.1.0 ↗ alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like 0.54 48.0 4.22e-01 94.5% 67.8%
5002845 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.53 44.0 4.52e-01 92.9% 90.8%
3999487 604.1.1.0 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat 0.53 36.0 3.70e-01 95.3% 71.2%
3955485 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.53 46.0 3.49e-01 93.7% 80.3%
4223104 604.13.1.0 ↗ alpha bundles › Spectrin repeat-like › USP8 N-terminal domain-like › USP8 N-terminal domain-like 0.53 32.0 3.25e-01 90.6% 59.2%
4146573 2004.1.1.429 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N, AAA_15 0.52 46.0 3.04e-01 93.7% 32.3%
3657184 1128.1.1.0 ↗ alpha bundles › LYR protein › LYR protein › LYR protein 0.52 26.0 2.83e-01 86.6% 52.7%
3182496 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.52 46.0 3.26e-01 94.5% 50.7%
4802823 10.32.1.60 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › TcA_TcB_BD 0.52 45.0 3.27e-01 94.5% 34.6%
3763261 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.52 43.0 3.60e-01 94.5% 51.8%
4025221 3922.1.1.0 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 0.51 44.0 4.12e-01 93.7% 84.4%
4642325 5086.1.1.84 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_MFP_RND 0.51 45.0 4.55e-01 94.5% 93.1%
3202306 4006.1.1.8 ↗ alpha bundles › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Release factor (Pfam 00472) N-terminal alpha helical domain › Sas10_Utp3 0.51 32.0 3.28e-01 92.9% 65.0%
5044205 3755.3.1.637 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 0.51 45.0 3.38e-01 94.5% 41.0%
3235302 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.51 42.0 3.35e-01 94.5% 44.3%
4516566 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.51 45.0 3.90e-01 94.5% 63.7%
3947717 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.51 44.0 4.11e-01 93.7% 99.4%
3594019 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.50 42.0 3.30e-01 94.5% 42.6%
3973285 3755.1.1.28 ↗ alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › PF25876 0.50 44.0 4.38e-01 95.3% 91.1%
3361162 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.50 44.0 4.48e-01 94.5% 95.2%