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TF_protein
Euk-VirZambian_malbrouck_virus_1
TF_protein__YP_009825022__Zambian_malbrouck_virus_1__2682610
Identity
- Accession:
- YP_009825022 ↗
- Protein ID:
- TF_protein
- Kingdom:
- euk
Quality
64.9
mean pLDDT
Taxonomy
Orthornavirae›
Pisuviricota›
Pisoniviricetes›
Nidovirales›
Arteriviridae›
Epsilonarterivirus›
Zambian_malbrouck_virus_1
TaxID: 2682610
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 157-207
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7cafA01 | 1.10.3720.10 | Mainly Alpha › Orthogonal Bundle › MetI-like fold › MetI-like | 0.60 | 45.0 | 2.91e-01 | 86.3% | 82.8% |
| 1ra6A03 | 1.20.960.20 | Mainly Alpha › Up-down Bundle › Mitochondrial Import Receptor Subunit Tom20; Chain A › | 0.56 | 38.0 | 3.24e-01 | 70.6% | 52.9% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5012698 | 101.1.4.0 ↗ | alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like | 0.61 | 46.0 | 4.04e-01 | 88.2% | 92.9% |
| 3844118 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 35.0 | 2.31e-01 | 72.5% | 12.6% |
| 3455419 | 206.1.1.20 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PK_Tyr_Ser-Thr | 0.59 | 49.0 | 2.97e-01 | 92.2% | 42.4% |
| 3337338 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.59 | 48.0 | 2.95e-01 | 94.1% | 42.4% |
| 3181845 | 376.1.1.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ | 0.58 | 36.0 | 3.72e-01 | 74.5% | 64.0% |
| 3674725 | 206.1.1.74 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr | 0.58 | 48.0 | 2.90e-01 | 92.2% | 36.2% |
| 3843819 | 376.1.1.20 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX | 0.54 | 36.0 | 3.33e-01 | 72.5% | 54.7% |
| 3783286 | 376.1.1.3 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › ZZ | 0.51 | 35.0 | 3.37e-01 | 74.5% | 63.3% |
D2
medium
residues 3-153