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TM-glycoprotein
Euk-VirBall_python_nidovirus_1
TM-glycoprotein__YP_009052481__Ball_python_nidovirus_1__1986118
Identity
- Accession:
- YP_009052481 ↗
- Protein ID:
- TM-glycoprotein
- Kingdom:
- euk
Quality
60.3
mean pLDDT
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 133-176_188-240
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3lx7A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 30.0 | 4.19e-01 | 92.8% | 93.5% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4037435 | 4.6.1.6 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain › PRC_RimM | 0.57 | 37.0 | 4.28e-01 | 89.7% | 91.4% |
| 3401203 | 59.1.3.0 ↗ | beta complex topology › triple barrel › triple barrel › RNA polymerase I subunits A49/A34.5 dimerization domains | 0.51 | 32.0 | 3.34e-01 | 87.6% | 69.4% |
D2
medium
residues 177-187_241-314
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1xovA03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.57 | 32.0 | 3.44e-01 | 87.1% | 62.5% |