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TNF_alpha_receptor-like_protein

Euk-Vir

Raccoonpox_virus

TNF_alpha_receptor-like_protein__YP_009143315__Raccoonpox_virus__10256

Identity

Accession:
YP_009143315 ↗
Protein ID:
TNF_alpha_receptor-like_protein
Kingdom:
euk

Quality

84.3 mean pLDDT

Cluster

View cluster (15 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 35-83
PDB
Domain cluster: rep: membrane_protein_ORF124__YP_003358263__Anguillid_herpesvirus_1__150286__D22-79
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00020.25 best TNFR_c6 21.4 3.70e-04 59.2% 69.2%
D2 high residues 177-336
PDB
Domain cluster: rep: Viral_TNFR_II-like_c-terminal_fragment__YP_227393__Deerpox_virus_W-848-83__305674__D31-193
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07190.17 best CrmD_SECRET 63.3 3.80e-17 95.6% 72.7%
D3 medium residues 92-169
PDB
Domain cluster: representative
CATH (14)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3mhdD02 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.78 45.0 5.68e-01 73.1% 100.0%
4rsuE01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.71 42.0 4.73e-01 79.5% 78.0%
6faxR01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.70 43.0 5.25e-01 76.9% 98.0%
4yn0A02 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.57 49.0 4.81e-01 96.2% 92.8%
3me4B01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.57 50.0 4.97e-01 98.7% 97.5%
1sg1X02 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.57 48.0 4.87e-01 96.2% 98.7%
1sg1X01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.56 48.0 4.76e-01 97.4% 95.1%
2e4uA03 2.10.50.30 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › GPCR, family 3, nine cysteines domain 0.56 40.0 4.25e-01 97.4% 90.8%
4kgqD02 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.55 46.0 4.65e-01 96.2% 96.2%
1extA01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.54 46.0 4.50e-01 97.4% 95.3%
2uwiA01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.53 45.0 4.48e-01 98.7% 94.0%
3u3pA01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.53 45.0 4.45e-01 98.7% 98.8%
4mxwS00 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.52 43.0 4.34e-01 97.4% 93.7%
3mhdD01 2.10.50.10 Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 0.52 44.0 4.34e-01 98.7% 96.5%
ECOD (40)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1758433 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.88 60.0 7.17e-01 78.2% 100.0%
3555618 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.87 55.0 5.68e-01 76.9% 68.0%
4377309 389.1.3.0 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.86 62.0 6.21e-01 78.2% 72.5%
3892307 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.86 61.0 6.64e-01 73.1% 87.7%
8521 389.1.3.0 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.85 53.0 6.37e-01 75.6% 90.9%
1572587 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.85 78.0 7.44e-01 98.7% 86.5%
1884975 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.84 72.0 7.29e-01 98.7% 92.2%
3920102 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.84 57.0 5.87e-01 78.2% 73.3%
3562936 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.84 58.0 5.80e-01 76.9% 70.0%
4221424 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.82 59.0 5.88e-01 79.5% 72.5%
3910723 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.81 72.0 6.49e-01 100.0% 71.4%
3893236 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.73 52.0 5.38e-01 78.2% 77.3%
3537811 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.73 60.0 5.77e-01 88.5% 93.3%
3880888 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.71 54.0 5.12e-01 80.8% 68.9%
1759571 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.70 46.0 5.22e-01 75.6% 91.2%
1639607 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.66 44.0 5.04e-01 75.6% 94.7%
3884016 389.1.3.0 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.64 44.0 4.86e-01 76.9% 91.7%
3558594 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.63 47.0 5.15e-01 100.0% 95.4%
1394117 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.61 44.0 4.85e-01 78.2% 95.1%
3900125 389.1.3.0 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.58 50.0 5.05e-01 96.2% 100.0%
3526975 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.58 47.0 3.69e-01 91.0% 49.1%
3482382 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.57 50.0 4.93e-01 98.7% 98.8%
3887726 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.57 50.0 4.98e-01 97.4% 95.0%
3540238 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.57 49.0 4.02e-01 96.2% 53.1%
4027163 389.1.3.0 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.57 43.0 4.22e-01 82.1% 91.8%
3894281 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.57 48.0 4.73e-01 96.2% 91.8%
3847264 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.56 48.0 4.54e-01 98.7% 80.0%
1184772 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.56 47.0 4.70e-01 94.9% 93.8%
1184748 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.56 47.0 4.70e-01 96.2% 93.9%
3507723 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.55 46.0 4.63e-01 94.9% 96.2%
3886488 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.55 48.0 4.67e-01 98.7% 92.9%
4342996 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.54 47.0 4.68e-01 98.7% 96.2%
3921747 389.1.3.0 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.54 47.0 4.75e-01 98.7% 96.2%
3887144 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.54 45.0 4.32e-01 94.9% 100.0%
3911223 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.54 46.0 4.50e-01 97.4% 94.1%
3898988 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.53 44.0 4.54e-01 96.2% 100.0%
3553054 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.53 44.0 4.43e-01 96.2% 98.8%
3617897 389.1.3.0 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like 0.52 42.0 4.32e-01 91.0% 94.7%
3774474 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.52 42.0 4.28e-01 93.6% 96.0%
3880887 389.1.3.1 ↗ few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 0.51 42.0 4.23e-01 93.6% 92.5%