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TNF_alpha_receptor-like_protein
Euk-VirRaccoonpox_virus
TNF_alpha_receptor-like_protein__YP_009143519__Raccoonpox_virus__10256
Identity
- Accession:
- YP_009143519 ↗
- Protein ID:
- TNF_alpha_receptor-like_protein
- Kingdom:
- euk
Quality
85.6
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Orthopoxvirus›
Raccoonpox_virus
TaxID: 10256
Cluster
View cluster (15 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-83
Domain cluster:
rep: membrane_protein_ORF124__YP_003358263__Anguillid_herpesvirus_1__150286__D22-79
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00020.25 best | TNFR_c6 | 21.4 | 3.70e-04 | 59.2% | 69.2% |
CATH (17)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2uwiA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.98 | 93.0 | 7.55e-01 | 100.0% | 61.4% |
| 3me4B01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.96 | 90.0 | 7.46e-01 | 100.0% | 61.3% |
| 4mxwS00 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.95 | 88.0 | 7.30e-01 | 100.0% | 64.6% |
| 3u3pA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.93 | 86.0 | 7.05e-01 | 100.0% | 66.3% |
| 3mhdD01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.93 | 85.0 | 6.92e-01 | 100.0% | 64.7% |
| 1extA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.92 | 86.0 | 6.97e-01 | 100.0% | 62.4% |
| 6faxR01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.92 | 84.0 | 8.40e-01 | 100.0% | 98.0% |
| 4rsuE01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.89 | 82.0 | 7.65e-01 | 100.0% | 84.7% |
| 4kgqD02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.83 | 70.0 | 5.96e-01 | 93.9% | 70.0% |
| 1d4vA03 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.83 | 60.0 | 6.16e-01 | 83.7% | 80.4% |
| 4yn0A02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.80 | 68.0 | 5.71e-01 | 95.9% | 66.3% |
| 1sg1X02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.78 | 66.0 | 5.65e-01 | 95.9% | 72.2% |
| 3thmF00 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.74 | 64.0 | 5.49e-01 | 100.0% | 62.3% |
| 3mhdD02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.68 | 53.0 | 5.53e-01 | 87.8% | 100.0% |
| 2heyT02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.67 | 58.0 | 4.99e-01 | 100.0% | 61.5% |
| 3bbaA00 | 3.90.70.50 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Streptopain (SpeB) | 0.55 | 39.0 | 2.60e-01 | 79.6% | 48.4% |
| 2dcnA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.52 | 40.0 | 2.63e-01 | 100.0% | 41.2% |
ECOD (56)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3876372 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 1.00 | 96.0 | 7.80e-01 | 100.0% | 63.7% |
| 3558594 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.99 | 95.0 | 8.42e-01 | 100.0% | 78.5% |
| 1572602 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.98 | 86.0 | 8.20e-01 | 91.8% | 85.5% |
| 3911223 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.98 | 93.0 | 7.46e-01 | 100.0% | 64.7% |
| 3887144 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.98 | 93.0 | 7.30e-01 | 100.0% | 56.7% |
| 3539066 | 389.1.3.8 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › RANK_CRD_2 | 0.97 | 92.0 | 7.75e-01 | 100.0% | 65.3% |
| 3921747 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.96 | 90.0 | 7.44e-01 | 100.0% | 61.3% |
| 3898988 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.96 | 90.0 | 7.62e-01 | 100.0% | 65.3% |
| 1672304 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.96 | 90.0 | 8.33e-01 | 100.0% | 86.4% |
| 3556262 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.96 | 90.0 | 7.23e-01 | 100.0% | 64.7% |
| 3507723 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.95 | 85.0 | 6.98e-01 | 93.9% | 71.2% |
| 4342996 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.94 | 88.0 | 7.27e-01 | 100.0% | 61.3% |
| 1639607 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.94 | 85.0 | 8.06e-01 | 98.0% | 94.7% |
| 1759571 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.93 | 86.0 | 8.10e-01 | 100.0% | 91.2% |
| 3847264 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.93 | 84.0 | 6.57e-01 | 100.0% | 50.5% |
| 1184747 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.93 | 86.0 | 7.07e-01 | 100.0% | 67.1% |
| 411888 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.92 | 81.0 | 7.68e-01 | 93.9% | 82.1% |
| 3884016 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.92 | 85.0 | 7.89e-01 | 100.0% | 91.7% |
| 3553054 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.92 | 85.0 | 7.05e-01 | 100.0% | 66.3% |
| 3886488 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.91 | 85.0 | 6.88e-01 | 100.0% | 60.0% |
| 1394117 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.91 | 83.0 | 7.60e-01 | 98.0% | 85.2% |
| 3871490 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.91 | 85.0 | 7.00e-01 | 100.0% | 62.5% |
| 3482382 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.90 | 82.0 | 6.71e-01 | 100.0% | 65.9% |
| 3774474 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.90 | 83.0 | 7.06e-01 | 100.0% | 66.7% |
| 3555201 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.89 | 70.0 | 6.49e-01 | 85.7% | 68.3% |
| 3880887 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.88 | 82.0 | 6.79e-01 | 100.0% | 63.7% |
| 3893236 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.86 | 73.0 | 6.27e-01 | 91.8% | 77.3% |
| 3893267 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.85 | 58.0 | 5.41e-01 | 81.6% | 58.3% |
| 3869177 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.85 | 78.0 | 6.68e-01 | 100.0% | 68.0% |
| 8527 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.85 | 75.0 | 7.28e-01 | 98.0% | 88.9% |
| 3910723 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.84 | 71.0 | 5.44e-01 | 91.8% | 56.2% |
| 1184772 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.84 | 71.0 | 6.00e-01 | 93.9% | 69.1% |
| 3883090 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.84 | 77.0 | 6.40e-01 | 100.0% | 63.7% |
| 3516979 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.84 | 74.0 | 6.27e-01 | 100.0% | 66.3% |
| 3540238 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.83 | 72.0 | 5.05e-01 | 95.9% | 37.9% |
| 3887726 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.83 | 76.0 | 6.32e-01 | 100.0% | 65.0% |
| 4221424 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.82 | 71.0 | 5.99e-01 | 95.9% | 72.5% |
| 1884975 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.82 | 69.0 | 5.92e-01 | 93.9% | 70.1% |
| 3920102 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 70.0 | 6.06e-01 | 95.9% | 73.3% |
| 8523 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 63.0 | 6.68e-01 | 85.7% | 100.0% |
| 1572587 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 66.0 | 5.45e-01 | 91.8% | 67.4% |
| 3894281 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 68.0 | 5.63e-01 | 93.9% | 67.1% |
| 1758433 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 65.0 | 6.30e-01 | 89.8% | 98.2% |
| 1853180 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.80 | 62.0 | 6.58e-01 | 85.7% | 100.0% |
| 4377309 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.80 | 68.0 | 5.80e-01 | 95.9% | 72.5% |
| 1184748 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.79 | 66.0 | 5.63e-01 | 95.9% | 67.1% |
| 3876373 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.78 | 62.0 | 5.72e-01 | 87.8% | 68.3% |
| 2492302 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.76 | 63.0 | 6.15e-01 | 100.0% | 85.2% |
| 3882488 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.76 | 64.0 | 5.66e-01 | 100.0% | 64.7% |
| 3900125 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.75 | 67.0 | 5.63e-01 | 98.0% | 70.0% |
| 3562936 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.75 | 65.0 | 5.51e-01 | 98.0% | 70.0% |
| 2429343 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.74 | 53.0 | 5.67e-01 | 85.7% | 90.2% |
| 2909867 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.71 | 56.0 | 4.99e-01 | 98.0% | 60.9% |
| 2833473 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.71 | 56.0 | 4.90e-01 | 98.0% | 59.2% |
| 3579538 | 389.1.1.152 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like, EGF_3 | 0.69 | 60.0 | 4.26e-01 | 100.0% | 46.0% |
| 3904702 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.67 | 60.0 | 4.86e-01 | 100.0% | 61.1% |
D2
high
residues 177-342
Domain cluster:
rep: Viral_TNFR_II-like_c-terminal_fragment__YP_227393__Deerpox_virus_W-848-83__305674__D31-193
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF07190.17 best | CrmD_SECRET | 63.2 | 4.40e-17 | 92.2% | 72.7% |
D3
medium
residues 92-169
Domain cluster:
rep: TNF_alpha_receptor-like_protein__YP_009143315__Raccoonpox_virus__10256__D92-169