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TNF_receptor-like_protein
Euk-VirSea_otter_poxvirus
TNF_receptor-like_protein__YP_009480573__Sea_otter_poxvirus__1416741
Identity
- Accession:
- YP_009480573 ↗
- Protein ID:
- TNF_receptor-like_protein
- Kingdom:
- euk
Quality
85.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Mustelpoxvirus›
Sea_otter_poxvirus
TaxID: 1416741
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 187-240
Domain cluster:
rep: Truncated_TNFa-receptor__YP_009408128__Eptesipox_virus__1329402__D143-198
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00020.25 best | TNFR_c6 | 24.9 | 3.10e-05 | 66.7% | 82.0% |
CATH (13)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4yn0A02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.97 | 93.0 | 7.75e-01 | 100.0% | 66.3% |
| 4kgqD02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.90 | 83.0 | 7.16e-01 | 100.0% | 68.8% |
| 1sg1X02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.89 | 83.0 | 7.15e-01 | 100.0% | 68.4% |
| 1sg1X01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.87 | 79.0 | 6.84e-01 | 100.0% | 66.7% |
| 3thmF00 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.85 | 76.0 | 6.70e-01 | 100.0% | 72.7% |
| 5wjfA02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.84 | 68.0 | 6.08e-01 | 100.0% | 63.5% |
| 1extA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.80 | 72.0 | 6.14e-01 | 100.0% | 67.1% |
| 3mhdD01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.76 | 68.0 | 5.79e-01 | 100.0% | 64.7% |
| 4mxwS00 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.74 | 63.0 | 5.57e-01 | 100.0% | 65.8% |
| 2uwiA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.74 | 66.0 | 5.71e-01 | 100.0% | 66.3% |
| 3u3pA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.73 | 65.0 | 5.64e-01 | 100.0% | 66.3% |
| 3me4B01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.73 | 64.0 | 5.62e-01 | 100.0% | 70.0% |
| 3wvtA02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.55 | 36.0 | 3.96e-01 | 96.3% | 80.4% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4221424 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.96 | 92.0 | 7.80e-01 | 100.0% | 68.8% |
| 4377309 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.96 | 91.0 | 7.78e-01 | 100.0% | 68.8% |
| 3540238 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.96 | 91.0 | 6.36e-01 | 100.0% | 37.9% |
| 3516979 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.95 | 90.0 | 7.66e-01 | 100.0% | 68.8% |
| 3482382 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.94 | 88.0 | 7.38e-01 | 100.0% | 68.2% |
| 3920102 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.93 | 88.0 | 7.69e-01 | 100.0% | 72.0% |
| 3894281 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.93 | 87.0 | 7.27e-01 | 100.0% | 63.5% |
| 1184748 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.93 | 87.0 | 7.37e-01 | 100.0% | 67.1% |
| 3555618 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.91 | 85.0 | 7.49e-01 | 100.0% | 72.0% |
| 1184772 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.90 | 83.0 | 7.15e-01 | 100.0% | 67.9% |
| 3876373 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.89 | 80.0 | 7.50e-01 | 100.0% | 81.0% |
| 3562936 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.89 | 83.0 | 7.11e-01 | 100.0% | 68.8% |
| 3887726 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.88 | 79.0 | 6.85e-01 | 100.0% | 66.3% |
| 3847264 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.86 | 79.0 | 6.46e-01 | 100.0% | 57.9% |
| 3871490 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.82 | 74.0 | 6.43e-01 | 100.0% | 70.0% |
| 3539066 | 389.1.3.8 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › RANK_CRD_2 | 0.80 | 72.0 | 6.43e-01 | 100.0% | 74.7% |
| 3893236 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.80 | 69.0 | 6.22e-01 | 100.0% | 69.3% |
| 3893267 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.80 | 66.0 | 6.38e-01 | 100.0% | 81.7% |
| 3869177 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.80 | 72.0 | 6.41e-01 | 100.0% | 73.3% |
| 3883090 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.79 | 72.0 | 6.24e-01 | 100.0% | 68.8% |
| 3898988 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.79 | 71.0 | 6.35e-01 | 100.0% | 74.7% |
| 3507723 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.79 | 71.0 | 6.18e-01 | 100.0% | 67.5% |
| 4342996 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.79 | 71.0 | 6.22e-01 | 100.0% | 70.0% |
| 3911223 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.78 | 70.0 | 5.99e-01 | 100.0% | 63.5% |
| 3774474 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.77 | 70.0 | 6.23e-01 | 100.0% | 73.3% |
| 3556262 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.77 | 69.0 | 5.91e-01 | 100.0% | 64.7% |
| 3887144 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.77 | 68.0 | 5.77e-01 | 100.0% | 62.2% |
| 3852777 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.77 | 70.0 | 6.19e-01 | 100.0% | 73.3% |
| 3876372 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.75 | 67.0 | 5.88e-01 | 100.0% | 68.8% |
| 1759571 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.73 | 49.0 | 4.86e-01 | 70.4% | 66.7% |
| 3921747 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.68 | 60.0 | 5.27e-01 | 100.0% | 70.0% |
| 3537811 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.65 | 56.0 | 4.70e-01 | 94.4% | 66.7% |
| 3880888 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.65 | 55.0 | 4.66e-01 | 94.4% | 65.6% |
| 3892307 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.63 | 54.0 | 5.04e-01 | 94.4% | 93.8% |
| 3558596 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.53 | 34.0 | 3.71e-01 | 96.3% | 80.0% |
| 1497631 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.52 | 35.0 | 3.80e-01 | 96.3% | 80.9% |