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TNF_receptor
Euk-VirNY_014_poxvirus
TNF_receptor__YP_009408396__NY_014_poxvirus__2025360
Identity
- Accession:
- YP_009408396 ↗
- Protein ID:
- TNF_receptor
- Kingdom:
- euk
Quality
79.4
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Centapoxvirus›
NY_014_poxvirus
TaxID: 2025360
Cluster
View cluster (11 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 110-163
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2uwiA02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.71 | 53.0 | 5.63e-01 | 85.2% | 100.0% |
| 1sg1X01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.59 | 49.0 | 4.32e-01 | 96.3% | 61.7% |
| 3e4vA01 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.50 | 35.0 | 2.55e-01 | 75.9% | 59.2% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3892307 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.69 | 54.0 | 5.11e-01 | 90.7% | 72.3% |
| 3537811 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.65 | 56.0 | 4.75e-01 | 98.1% | 76.7% |
| 3565691 | 387.1.3.4 ↗ | few secondary structure elements › omega toxin-like › omega toxin-related › Colipase-like › Prokineticin | 0.56 | 30.0 | 3.18e-01 | 87.0% | 56.0% |
| 3696482 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.52 | 32.0 | 2.79e-01 | 74.1% | 36.0% |
D2
medium
residues 27-109
Domain cluster:
rep: HSPV175__ABH08285__Horsepox_virus__397342__D22-94
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00020.25 best | TNFR_c6 | 24.6 | 3.80e-05 | 44.6% | 100.0% |
| PF00020.25 | TNFR_c6 | 26.4 | 1.00e-05 | 42.2% | 87.2% |
CATH (16)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2uwiA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.90 | 77.0 | 7.70e-01 | 89.2% | 90.4% |
| 1extA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.89 | 77.0 | 7.65e-01 | 91.6% | 92.9% |
| 4mxwS00 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.87 | 72.0 | 7.45e-01 | 90.4% | 92.4% |
| 3u3pA01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.87 | 71.0 | 7.17e-01 | 86.7% | 91.6% |
| 3mhdD01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.86 | 71.0 | 7.09e-01 | 88.0% | 90.6% |
| 3me4B01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.84 | 70.0 | 7.16e-01 | 89.2% | 91.3% |
| 4kgqD02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.81 | 59.0 | 5.99e-01 | 75.9% | 91.3% |
| 4rsuE01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.80 | 54.0 | 6.22e-01 | 72.3% | 96.6% |
| 1sg1X02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.78 | 61.0 | 6.32e-01 | 83.1% | 92.4% |
| 3thmF00 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.78 | 58.0 | 6.07e-01 | 80.7% | 84.4% |
| 1sg1X01 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.77 | 63.0 | 6.40e-01 | 94.0% | 90.1% |
| 4yn0A02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.74 | 61.0 | 6.15e-01 | 96.4% | 88.0% |
| 5wjfA02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.69 | 53.0 | 5.57e-01 | 97.6% | 89.2% |
| 2heyT02 | 2.10.50.10 | Mainly Beta › Ribbon › Tumor Necrosis Factor Receptor, subunit A; domain 2 › Tumor Necrosis Factor Receptor, subunit A, domain 2 | 0.65 | 53.0 | 5.50e-01 | 100.0% | 93.6% |
| 5c0pA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 40.0 | 2.88e-01 | 79.5% | 57.4% |
| 3kyaA02 | 2.120.10.30 | Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain | 0.52 | 39.0 | 2.68e-01 | 83.1% | 51.8% |
ECOD (59)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1672304 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.92 | 64.0 | 7.56e-01 | 71.1% | 100.0% |
| 3887144 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.92 | 88.0 | 8.50e-01 | 100.0% | 95.6% |
| 3911223 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.92 | 78.0 | 7.80e-01 | 89.2% | 90.6% |
| 3898988 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.92 | 75.0 | 7.96e-01 | 86.7% | 94.7% |
| 3876372 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.91 | 78.0 | 7.98e-01 | 89.2% | 92.5% |
| 3539066 | 389.1.3.8 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › RANK_CRD_2 | 0.91 | 76.0 | 7.97e-01 | 88.0% | 96.0% |
| 3847264 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.90 | 76.0 | 7.21e-01 | 90.4% | 76.8% |
| 4342996 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.90 | 76.0 | 7.75e-01 | 89.2% | 91.3% |
| 3558594 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.90 | 67.0 | 7.54e-01 | 77.1% | 100.0% |
| 3553054 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.89 | 74.0 | 7.53e-01 | 86.7% | 93.8% |
| 3556262 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.89 | 74.0 | 7.41e-01 | 88.0% | 90.6% |
| 3916366 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.89 | 54.0 | 6.59e-01 | 71.1% | 92.7% |
| 3774474 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.88 | 73.0 | 7.67e-01 | 89.2% | 96.0% |
| 3482382 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.87 | 72.0 | 7.13e-01 | 86.7% | 91.8% |
| 3768685 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.87 | 74.0 | 7.02e-01 | 90.4% | 77.9% |
| 3886488 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.87 | 76.0 | 7.56e-01 | 91.6% | 90.6% |
| 1184747 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.86 | 71.0 | 7.18e-01 | 86.7% | 92.7% |
| 3869177 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.86 | 68.0 | 7.21e-01 | 85.5% | 92.0% |
| 3852777 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.86 | 73.0 | 7.65e-01 | 90.4% | 98.7% |
| 3880887 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.85 | 74.0 | 7.56e-01 | 91.6% | 95.0% |
| 3871490 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.85 | 72.0 | 7.35e-01 | 90.4% | 92.5% |
| 3893236 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.85 | 62.0 | 6.53e-01 | 75.9% | 98.7% |
| 3516979 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.84 | 71.0 | 7.21e-01 | 89.2% | 92.5% |
| 3887726 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.83 | 70.0 | 7.17e-01 | 94.0% | 92.5% |
| 1394117 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.83 | 57.0 | 6.60e-01 | 71.1% | 98.4% |
| 3921747 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.82 | 69.0 | 7.10e-01 | 90.4% | 92.5% |
| 8527 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.82 | 52.0 | 6.31e-01 | 73.5% | 100.0% |
| 3507723 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.82 | 72.0 | 7.34e-01 | 96.4% | 93.8% |
| 3883090 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.82 | 69.0 | 7.02e-01 | 90.4% | 91.3% |
| 3555618 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.82 | 67.0 | 6.99e-01 | 90.4% | 96.0% |
| 3756712 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 74.0 | 6.76e-01 | 97.6% | 76.2% |
| 3876373 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.81 | 54.0 | 6.17e-01 | 72.3% | 90.5% |
| 1184772 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 60.0 | 6.09e-01 | 77.1% | 91.4% |
| 3844666 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.81 | 56.0 | 6.12e-01 | 72.3% | 88.6% |
| 3758936 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.79 | 54.0 | 5.82e-01 | 88.0% | 82.9% |
| 3894281 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.79 | 61.0 | 6.10e-01 | 81.9% | 85.9% |
| 3920102 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.79 | 61.0 | 6.40e-01 | 81.9% | 94.7% |
| 3882488 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.78 | 57.0 | 6.26e-01 | 84.3% | 91.2% |
| 3885918 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.78 | 58.0 | 6.16e-01 | 79.5% | 86.7% |
| 3759682 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.77 | 60.0 | 5.96e-01 | 81.9% | 85.9% |
| 3524839 | 389.1.3.24 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6, PF27736 | 0.77 | 60.0 | 5.30e-01 | 81.9% | 63.5% |
| 3540238 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.75 | 63.0 | 5.12e-01 | 96.4% | 50.3% |
| 3562936 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.74 | 57.0 | 5.86e-01 | 81.9% | 92.5% |
| 2492302 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.74 | 47.0 | 5.58e-01 | 75.9% | 100.0% |
| 2833473 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.73 | 51.0 | 5.50e-01 | 81.9% | 84.5% |
| 2909867 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.73 | 51.0 | 5.57e-01 | 81.9% | 87.0% |
| 3904702 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.72 | 57.0 | 5.60e-01 | 83.1% | 78.9% |
| 3758695 | 389.1.3.2 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › NCD3G | 0.72 | 49.0 | 5.47e-01 | 98.8% | 89.2% |
| 3900125 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.71 | 59.0 | 6.09e-01 | 98.8% | 91.3% |
| 4221424 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.71 | 61.0 | 6.23e-01 | 96.4% | 95.0% |
| 3848812 | 389.1.3.2 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › NCD3G | 0.71 | 49.0 | 5.49e-01 | 94.0% | 90.8% |
| 4377309 | 389.1.3.0 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like | 0.71 | 61.0 | 6.19e-01 | 96.4% | 95.0% |
| 1184748 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.71 | 59.0 | 5.93e-01 | 96.4% | 90.2% |
| 3910723 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.69 | 63.0 | 5.74e-01 | 97.6% | 91.4% |
| 1883254 | 389.1.3.2 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › NCD3G | 0.68 | 48.0 | 5.10e-01 | 90.4% | 83.3% |
| 1884975 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.67 | 48.0 | 5.02e-01 | 74.7% | 93.5% |
| 1572587 | 389.1.3.1 ↗ | few secondary structure elements › EGF-like › EGF-related › TNF receptor-like › TNFR_c6 | 0.66 | 47.0 | 4.65e-01 | 74.7% | 88.8% |
| 3264214 | 389.1.1.118 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › PF29736 | 0.63 | 38.0 | 3.99e-01 | 83.1% | 66.7% |
| 3549809 | 389.1.1.105 ↗ | few secondary structure elements › EGF-like › EGF-related › EGF/Laminin › Ephrin_rec_like, Ephrin_CRD | 0.57 | 53.0 | 4.44e-01 | 100.0% | 78.5% |