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Transcription_regulatory_protein_SNF5
Euk-VirMollivirus_sibericum_Viruses.
Transcription_regulatory_protein_SNF5__YP_009165439__Mollivirus_sibericum_Viruses.__X
Identity
- Accession:
- YP_009165439 ↗
- Protein ID:
- Transcription_regulatory_protein_SNF5
- Kingdom:
- euk
Quality
64.7
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 72-149
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00096.33 best | zf-C2H2 | 16.2 | 1.60e-02 | 33.3% | 100.0% |
| PF00096.33 | zf-C2H2 | 17.3 | 7.30e-03 | 33.3% | 100.0% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1x3cA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.78 | 46.0 | 4.77e-01 | 94.9% | 63.0% |
| 4m9vC00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.62 | 43.0 | 4.72e-01 | 88.5% | 96.7% |
| 4r2qA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.60 | 43.0 | 4.17e-01 | 87.2% | 68.2% |
| 1d4tA00 | 3.30.505.10 | Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain | 0.58 | 34.0 | 3.15e-01 | 71.8% | 43.3% |
| 6e94A02 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.55 | 37.0 | 4.04e-01 | 84.6% | 96.4% |
| 4kn7D01 | 1.10.132.30 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › RNA polymerase Rpb1 funnel domain | 0.53 | 36.0 | 3.16e-01 | 74.4% | 100.0% |
| 2ctdA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.51 | 31.0 | 2.89e-01 | 78.2% | 50.0% |
| 5undA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.51 | 34.0 | 3.84e-01 | 89.7% | 100.0% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 8338 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.78 | 46.0 | 5.16e-01 | 94.9% | 75.4% |
| 3403245 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.75 | 38.0 | 3.69e-01 | 70.5% | 44.7% |
| 3636590 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.74 | 41.0 | 3.51e-01 | 79.5% | 35.8% |
| 3511223 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.73 | 42.0 | 5.31e-01 | 97.4% | 100.0% |
| 3178202 | 386.1.1.38 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › Zap1_zf2 | 0.71 | 37.0 | 5.05e-01 | 88.5% | 100.0% |
| 3220182 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.71 | 42.0 | 4.66e-01 | 70.5% | 72.3% |
| 3932469 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.68 | 51.0 | 4.94e-01 | 93.6% | 71.8% |
| 3395566 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.65 | 48.0 | 5.00e-01 | 91.0% | 88.6% |
| 3199479 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.64 | 43.0 | 5.00e-01 | 84.6% | 98.2% |
| 3895780 | 386.1.1.24 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 | 0.64 | 44.0 | 4.75e-01 | 84.6% | 86.2% |
| 3273524 | 386.1.1.134 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_15 | 0.63 | 47.0 | 4.99e-01 | 84.6% | 88.6% |
| 3194248 | 386.1.1.305 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_6, zf-C2H2_15 | 0.62 | 53.0 | 4.50e-01 | 94.9% | 58.3% |
| 3731208 | 386.1.1.237 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_15 | 0.62 | 46.0 | 4.32e-01 | 84.6% | 64.2% |
| 3627119 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 46.0 | 4.57e-01 | 94.9% | 76.2% |
| 3496590 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.62 | 44.0 | 4.84e-01 | 87.2% | 100.0% |
| 3843041 | 386.1.1.234 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2, zf-C2H2_4 | 0.62 | 46.0 | 4.35e-01 | 93.6% | 66.3% |
| 4001811 | 386.1.1.24 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2_4 | 0.61 | 44.0 | 4.30e-01 | 89.7% | 70.6% |
| 3902016 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 48.0 | 4.67e-01 | 91.0% | 76.5% |
| 3925624 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.61 | 46.0 | 4.15e-01 | 93.6% | 58.2% |
| 3537258 | 386.1.1.233 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-H2C2_2 | 0.60 | 41.0 | 4.56e-01 | 83.3% | 100.0% |
| 3762095 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 44.0 | 4.16e-01 | 84.6% | 65.6% |
| 3474753 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.60 | 44.0 | 4.81e-01 | 94.9% | 93.8% |
| 3236734 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.60 | 43.0 | 4.78e-01 | 88.5% | 98.3% |
| 3743699 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.59 | 42.0 | 4.10e-01 | 88.5% | 66.7% |
| 3583621 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.59 | 43.0 | 4.22e-01 | 88.5% | 71.8% |
| 3246497 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.59 | 41.0 | 4.39e-01 | 73.1% | 81.4% |
| 3477736 | 386.1.1.237 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_15 | 0.58 | 45.0 | 3.96e-01 | 84.6% | 89.9% |
| 3792629 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.57 | 47.0 | 4.53e-01 | 97.4% | 83.3% |
| 4141919 | 386.1.1.237 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2, zf-C2H2_15 | 0.57 | 42.0 | 4.23e-01 | 89.7% | 80.0% |
| 3544480 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.57 | 45.0 | 4.37e-01 | 96.2% | 78.9% |
| 4190777 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.56 | 41.0 | 3.80e-01 | 79.5% | 72.4% |
| 3517185 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 49.0 | 4.39e-01 | 97.4% | 69.5% |
| 3929077 | 386.1.1.20 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-met | 0.56 | 41.0 | 3.70e-01 | 76.9% | 75.2% |
| 3178177 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.56 | 44.0 | 3.83e-01 | 96.2% | 54.4% |
| 3212231 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.56 | 40.0 | 4.51e-01 | 84.6% | 96.7% |
| 3180425 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.55 | 44.0 | 4.33e-01 | 93.6% | 81.2% |
| 4440234 | 386.1.1.1 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-C2H2 | 0.54 | 45.0 | 4.20e-01 | 100.0% | 92.4% |
| 3474931 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 42.0 | 3.54e-01 | 93.6% | 51.4% |
| 3796895 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 39.0 | 3.84e-01 | 94.9% | 76.5% |
| 3217816 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 40.0 | 3.87e-01 | 96.2% | 75.6% |
| 3203857 | 386.1.1.25 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-H2C2_5 | 0.52 | 42.0 | 4.34e-01 | 94.9% | 98.7% |
| 3500373 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 43.0 | 2.91e-01 | 89.7% | 61.9% |
| 3239845 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.50 | 40.0 | 3.38e-01 | 82.1% | 93.3% |
| 3733700 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.50 | 39.0 | 4.07e-01 | 89.7% | 100.0% |
| 3241842 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.50 | 38.0 | 3.56e-01 | 89.7% | 63.8% |