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Trimeric_virion_coat_protein
Euk-VirNY_014_poxvirus
Trimeric_virion_coat_protein__YP_009408498__NY_014_poxvirus__2025360
Identity
- Accession:
- YP_009408498 ↗
- Protein ID:
- Trimeric_virion_coat_protein
- Kingdom:
- euk
Quality
86.1
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Centapoxvirus›
NY_014_poxvirus
TaxID: 2025360
Cluster
View cluster (35 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 33-225
Domain cluster:
rep: major_capsid_protein__YP_009508644__Common_midwife_toad_virus__540070__D48-85_114-155_177-212_243-266
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03340.20 best | Pox_Rif | 304.0 | 2.60e-90 | 100.0% | 35.4% |
D2
high
residues 269-423
Domain cluster:
rep: rifampicin_resistance_protein__YP_009001666__Anomala_cuprea_entomopoxvirus__62099__D266-416
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03340.20 best | Pox_Rif | 281.5 | 1.70e-83 | 100.0% | 28.6% |
D3
medium
residues 226-267_428-549
Domain cluster:
rep: putative_capsid_protein_4__YP_003969808__Cafeteria_roenbergensis_virus_BV-PW1__693272__D326-494
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03340.20 best | Pox_Rif | 188.1 | 3.30e-55 | 73.8% | 22.1% |
| PF03340.20 | Pox_Rif | 50.7 | 1.40e-13 | 26.8% | 7.8% |