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Tyrosine-tRNA_ligase

Euk-Vir

Pandoravirus_salinus

Tyrosine-tRNA_ligase__YP_008438883__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008438883 ↗
Protein ID:
Tyrosine-tRNA_ligase
Kingdom:
euk

Quality

88.1 mean pLDDT

Cluster

View cluster (10 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 45-250
PDB
Domain cluster: rep: Mad1_20_16_scaffold_0_curated_closed_complete_start-adj_prodigal-single.1__X__X__00391__D1-117_229-334
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00579.32 best tRNA-synt_1b 133.3 1.60e-38 88.3% 63.4%
CATH (62)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1n3lA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.95 93.0 9.24e-01 100.0% 98.1%
1j1uA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.95 87.0 8.93e-01 100.0% 98.5%
2cycA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.92 89.0 8.60e-01 100.0% 97.3%
1j09A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.86 49.0 6.45e-01 86.4% 96.7%
1yi8B01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.86 72.0 7.15e-01 86.4% 83.8%
3p0hB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.86 63.0 5.39e-01 100.0% 50.3%
2j5bB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.86 77.0 7.89e-01 100.0% 97.0%
1qrsA05 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.86 51.0 6.58e-01 85.9% 99.2%
3p0hB02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.85 69.0 6.01e-01 88.8% 58.8%
1h3fA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.84 76.0 7.82e-01 100.0% 98.5%
1jilA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.84 80.0 7.82e-01 100.0% 99.1%
2pidA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.83 79.0 7.61e-01 99.5% 99.1%
2el7B01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.83 71.0 6.90e-01 90.3% 81.2%
2yy5A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.83 69.0 6.87e-01 86.4% 82.3%
3u1vA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.83 69.0 6.81e-01 85.9% 81.9%
1r6uA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.83 79.0 7.24e-01 100.0% 84.9%
3a04A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.82 79.0 7.31e-01 100.0% 84.1%
3do8A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.82 48.0 5.94e-01 85.9% 88.9%
6ncrB01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.82 71.0 6.74e-01 88.8% 80.3%
3focA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.82 78.0 6.80e-01 100.0% 83.2%
3hzrA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.82 78.0 7.09e-01 100.0% 81.0%
1y42X01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.81 77.0 7.00e-01 100.0% 91.8%
3oqiA00 3.40.50.11710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase 0.77 69.0 6.79e-01 96.1% 99.1%
3oqvA00 3.40.50.11710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase 0.76 64.0 6.37e-01 88.3% 95.7%
1ufvA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.74 54.0 5.88e-01 87.4% 90.1%
2x9qB00 3.40.50.11710 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase 0.73 67.0 6.59e-01 98.1% 94.6%
6hcdD00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.73 45.0 5.52e-01 86.9% 94.1%
1q77A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.73 48.0 5.82e-01 87.4% 99.3%
1irxA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.73 69.0 6.71e-01 100.0% 99.6%
4g6zA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.70 60.0 5.17e-01 88.8% 70.9%
4h3sA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.69 66.0 5.37e-01 99.5% 75.9%
3fg9C01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.67 45.0 5.42e-01 85.4% 99.3%
3aiiA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.65 61.0 5.27e-01 98.1% 75.8%
2x0kA01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.65 44.0 4.61e-01 86.9% 74.7%
7jt8I02 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.65 40.0 4.73e-01 92.7% 87.5%
3k1tA02 3.40.50.11280 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glutamate-cysteine ligase, N-terminal domain 0.64 38.0 4.55e-01 99.0% 85.6%
2wq7A01 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.64 41.0 4.95e-01 87.4% 97.1%
4nesA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.62 38.0 4.25e-01 86.4% 76.7%
6h4dA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.61 44.0 4.96e-01 100.0% 98.0%
4x7rA03 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.60 38.0 4.15e-01 86.9% 75.7%
2p6pB01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.59 38.0 3.84e-01 85.9% 63.8%
4g2tA01 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 39.0 3.93e-01 86.4% 66.3%
4pqgA03 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.58 38.0 4.12e-01 86.9% 77.6%
3mc3A00 3.40.1260.10 Alpha Beta › 3-Layer(aba) Sandwich › Hypothetical Protein Ychn; Chain: A, › DsrEFH-like 0.57 34.0 4.38e-01 73.8% 100.0%
2r60A02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.57 40.0 3.96e-01 86.9% 67.9%
1js1X02 3.40.50.1370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Aspartate/ornithine carbamoyltransferase 0.55 40.0 4.56e-01 97.1% 100.0%
4ccsA02 3.40.50.1400 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 33.0 4.16e-01 81.6% 99.2%
3cisH00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 51.0 4.58e-01 100.0% 90.4%
2yjgA02 3.40.50.11440 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LarA, N-terminal domain 0.54 48.0 4.64e-01 96.6% 84.1%
3ih5A00 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 43.0 4.32e-01 86.4% 82.0%
2c1lA01 3.30.870.10 Alpha Beta › 2-Layer Sandwich › Endonuclease; Chain A › Endonuclease Chain A 0.54 35.0 3.68e-01 92.7% 70.2%
3mt0A00 3.40.50.12370 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 50.0 4.50e-01 100.0% 85.1%
5h7kA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 43.0 4.10e-01 84.0% 90.9%
4yztA01 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.53 47.0 4.04e-01 93.2% 87.6%
3fvvA01 3.40.50.1000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HAD superfamily/HAD-like 0.52 37.0 4.27e-01 87.4% 99.3%
1m22A00 3.90.1300.10 Alpha Beta › Alpha-Beta Complex › Amidase signature (AS) enzymes › Amidase signature (AS) domain 0.52 39.0 2.96e-01 77.2% 70.6%
2hk0A00 3.20.20.150 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Divalent-metal-dependent TIM barrel enzymes 0.52 44.0 3.96e-01 90.8% 91.3%
1bqcA00 3.20.20.80 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases 0.52 45.0 4.00e-01 93.7% 86.1%
1gg4A01 3.90.190.20 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Mur ligase, C-terminal domain 0.51 33.0 3.89e-01 93.2% 96.3%
2x6qA02 3.40.50.2000 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; 0.51 39.0 4.05e-01 82.5% 84.3%
6eqoA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.50 44.0 4.50e-01 95.6% 95.1%
2efjA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.50 44.0 4.42e-01 96.1% 93.0%
ECOD (80)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4064994 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 1.00 98.0 8.01e-01 100.0% 62.3%
3722941 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.98 97.0 7.74e-01 100.0% 59.1%
4061943 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.98 96.0 7.75e-01 100.0% 60.3%
4013546 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.98 96.0 7.79e-01 100.0% 60.6%
5048102 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.97 92.0 7.53e-01 98.1% 60.0%
3997952 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.95 88.0 7.28e-01 100.0% 60.3%
3736527 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.94 92.0 7.59e-01 100.0% 62.4%
5079552 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.92 89.0 6.98e-01 100.0% 58.4%
5012077 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.92 88.0 7.08e-01 100.0% 56.9%
4023690 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.91 89.0 7.05e-01 100.0% 56.5%
4967192 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.91 89.0 7.36e-01 100.0% 64.9%
5001337 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.90 88.0 6.95e-01 100.0% 56.8%
3497647 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.89 86.0 6.52e-01 100.0% 53.0%
3233553 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.89 85.0 6.80e-01 100.0% 55.9%
4979586 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.88 85.0 6.82e-01 100.0% 56.4%
3465691 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.88 84.0 6.92e-01 100.0% 61.2%
3841032 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.86 82.0 6.65e-01 100.0% 65.8%
3973572 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.86 83.0 7.03e-01 100.0% 68.1%
4408360 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.86 82.0 6.92e-01 100.0% 66.3%
4275453 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.85 82.0 6.85e-01 100.0% 68.9%
4469624 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.85 72.0 5.89e-01 87.4% 52.9%
4028591 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.85 82.0 6.50e-01 100.0% 67.5%
4241086 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.85 82.0 6.69e-01 100.0% 61.7%
4274340 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.85 81.0 6.82e-01 100.0% 68.0%
3470065 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.85 81.0 6.54e-01 100.0% 64.4%
2140850 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.85 81.0 8.09e-01 100.0% 97.2%
4040836 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.84 81.0 6.72e-01 100.0% 67.3%
4198332 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.84 71.0 5.76e-01 86.4% 52.3%
3505575 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.84 81.0 6.43e-01 100.0% 61.6%
4357984 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.84 72.0 5.91e-01 87.4% 55.2%
3249469 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.84 81.0 5.99e-01 100.0% 50.3%
4445770 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.84 80.0 6.55e-01 100.0% 62.6%
3469964 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.84 70.0 5.73e-01 85.4% 52.9%
3938266 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.84 80.0 6.56e-01 100.0% 66.4%
4600892 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.83 79.0 6.56e-01 99.0% 65.7%
3970530 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.83 80.0 6.65e-01 100.0% 66.1%
3651640 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.83 71.0 5.72e-01 87.9% 53.9%
387721 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.83 70.0 5.88e-01 86.9% 55.8%
4015705 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.83 79.0 6.17e-01 100.0% 55.8%
4513977 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.83 78.0 6.65e-01 98.5% 66.7%
1260984 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.83 79.0 6.11e-01 100.0% 52.9%
4037949 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.82 71.0 5.86e-01 99.0% 54.7%
4664989 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.82 69.0 5.73e-01 87.4% 54.1%
4948751 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.82 77.0 6.43e-01 100.0% 61.1%
135810 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.82 78.0 6.22e-01 100.0% 57.0%
5067873 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.81 78.0 6.20e-01 100.0% 59.7%
5027513 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.81 77.0 6.81e-01 100.0% 71.9%
4467711 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.81 77.0 6.37e-01 99.0% 63.6%
5077374 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.81 76.0 6.10e-01 100.0% 54.4%
5053430 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.81 77.0 6.28e-01 100.0% 58.0%
5054061 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.81 76.0 6.24e-01 100.0% 58.8%
5058738 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.80 77.0 6.27e-01 100.0% 59.7%
5027854 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.80 77.0 6.18e-01 100.0% 58.1%
5003581 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.80 76.0 5.92e-01 100.0% 64.7%
4133327 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.80 76.0 6.02e-01 100.0% 61.6%
4955082 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.79 75.0 6.30e-01 100.0% 62.4%
2404828 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.78 71.0 6.92e-01 96.6% 96.0%
3703665 2005.1.1.2 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1b 0.77 72.0 6.78e-01 97.1% 95.4%
3288241 2005.1.1.31 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CDPS 0.77 71.0 6.75e-01 96.1% 90.2%
3719341 2005.1.1.0 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains 0.76 57.0 5.53e-01 76.2% 80.4%
2410577 2005.1.1.31 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CDPS 0.76 70.0 6.83e-01 97.6% 98.6%
2700810 2005.1.1.31 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › CDPS 0.74 69.0 6.66e-01 99.0% 98.3%
4050304 2005.1.1.5 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c 0.69 64.0 5.28e-01 98.1% 77.4%
5054969 2005.1.1.5 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c 0.68 50.0 5.08e-01 75.7% 99.5%
2494136 2005.1.1.6 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › tRNA-synt_1c,tRNA_synt_1c_R2 0.67 41.0 5.08e-01 92.7% 96.9%
169836 2005.1.1.3 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › Usp 0.67 47.0 5.37e-01 91.7% 94.9%
4973298 7512.1.1.30 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_4 0.61 40.0 4.14e-01 88.3% 68.2%
4276737 7531.1.1.0 ↗ a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like 0.60 54.0 4.62e-01 95.1% 96.6%
3668330 7563.1.1.0 ↗ a/b three-layered sandwiches › MCP/YpsA-related › MCP/YpsA-related › MCP/YpsA-related 0.56 43.0 4.76e-01 92.7% 98.2%
3943336 7531.1.1.1 ↗ a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase 0.56 50.0 4.47e-01 97.1% 98.6%
3682951 7531.1.1.1 ↗ a/b three-layered sandwiches › Carbamate kinase-like › Carbamate kinase-like › Carbamate kinase-like › AA_kinase 0.55 51.0 4.39e-01 100.0% 91.7%
4984774 2004.1.1.14 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › GTP_EFTU 0.54 43.0 3.97e-01 82.5% 89.2%
5049739 2004.1.1.19 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras 0.54 42.0 4.31e-01 94.2% 85.1%
2327245 7512.1.1.26 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › EarP 0.54 37.0 4.14e-01 88.3% 90.4%
4991493 7545.1.1.1 ↗ a/b three-layered sandwiches › YchN-like › YchN-like › YchN-like › DsrE 0.53 32.0 4.12e-01 72.8% 100.0%
3413443 2003.1.1.0 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.51 41.0 3.85e-01 97.6% 67.8%
5050202 2007.6.1.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.51 32.0 3.35e-01 79.6% 68.9%
3983253 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.50 38.0 3.91e-01 83.0% 80.5%
5037295 2007.5.1.8 ↗ a/b three-layered sandwiches › Flavodoxin-like › SGNH hydrolase › SGNH hydrolase › Lipase_GDSL_2 0.50 40.0 4.13e-01 84.0% 95.5%
5051599 7512.1.1.3 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glycos_transf_1 0.50 37.0 4.04e-01 82.0% 90.9%
D2 high residues 267-381
PDB
Domain cluster: rep: Tyrosine-tRNA_ligase__YP_009481586__Pandoravirus_macleodensis__2107707__D275-404