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U20_protein
Euk-VirMacaca_nemestrina_herpesvirus_7
U20_protein__YP_009253924__Macaca_nemestrina_herpesvirus_7__1846169
Identity
- Accession:
- YP_009253924 ↗
- Protein ID:
- U20_protein
- Kingdom:
- euk
Quality
57.2
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Roseolovirus›
macacine_betaherpesvirus_9
TaxID: 1846169
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 84-173
D2
medium
residues 198-308
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1c16A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.84 | 55.0 | 5.88e-01 | 71.2% | 76.3% |
| 1ao7B00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.81 | 54.0 | 5.70e-01 | 70.3% | 75.0% |
| 1dceA02 | 2.60.40.1130 | Mainly Beta › Sandwich › Immunoglobulin-like › Rab geranylgeranyltransferase alpha-subunit, insert domain | 0.66 | 48.0 | 4.97e-01 | 75.7% | 86.4% |
| 6qk7A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.65 | 36.0 | 2.52e-01 | 79.3% | 18.2% |
| 2q7aA00 | 2.60.40.1850 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.61 | 42.0 | 3.79e-01 | 70.3% | 52.6% |
| 4hbrA00 | 3.10.450.360 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.58 | 36.0 | 3.33e-01 | 91.9% | 47.9% |
| 3a57A00 | 2.60.270.30 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Vibrio parahaemolyticus thermostable direct hemolysin | 0.58 | 43.0 | 3.87e-01 | 77.5% | 55.8% |
| 4b96A00 | 2.60.40.710 | Mainly Beta › Sandwich › Immunoglobulin-like › Endoglucanase-like | 0.58 | 40.0 | 3.64e-01 | 71.2% | 73.5% |
| 2zkmX04 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.57 | 44.0 | 4.19e-01 | 81.1% | 80.0% |
| 1rypK00 | 3.60.20.10 | Alpha Beta › 4-Layer Sandwich › Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 › Aminohydrolase, N-terminal nucleophile (Ntn) domain | 0.53 | 38.0 | 3.22e-01 | 76.6% | 58.1% |
| 2ecfA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.52 | 39.0 | 2.66e-01 | 80.2% | 40.2% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4272494 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.84 | 57.0 | 5.51e-01 | 70.3% | 68.0% |
| 3859225 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.80 | 54.0 | 5.18e-01 | 70.3% | 60.8% |
| 3747965 | 11.1.1.96 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C1-set | 0.80 | 54.0 | 5.06e-01 | 70.3% | 58.5% |
| 3547629 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.76 | 54.0 | 5.71e-01 | 74.8% | 84.0% |
| 3394335 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.70 | 49.0 | 4.25e-01 | 72.1% | 80.6% |
| 3230371 | 3180.1.1.0 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related | 0.69 | 31.0 | 3.14e-01 | 72.1% | 40.9% |
| 3584228 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.69 | 54.0 | 4.32e-01 | 82.9% | 76.7% |
| 3965887 | 11.1.1.457 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › FixH | 0.64 | 46.0 | 4.71e-01 | 73.9% | 90.5% |
| 3445473 | 11.1.1.855 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF26102 | 0.63 | 45.0 | 3.41e-01 | 74.8% | 41.1% |
| 5036742 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 44.0 | 4.51e-01 | 79.3% | 87.3% |
| 3417166 | 10.1.1.34 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › DUF3472 | 0.58 | 43.0 | 3.47e-01 | 79.3% | 81.3% |
| 3864149 | 11.1.1.805 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_PDGFR_d4 | 0.56 | 49.0 | 4.54e-01 | 97.3% | 87.1% |
| 3545017 | 206.1.1.0 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase | 0.55 | 49.0 | 3.15e-01 | 96.4% | 69.1% |