←Back to structures
U45242.1__AAB81659.1__X__00006
Bact-VirU45242.1__AAB81659.1__X__00006
Identity
- Accession:
- U45242 ↗
- Kingdom:
- phage
Quality
77.8
mean pLDDT
Taxonomy
TaxID: 1604876
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 9-46
Domain cluster:
representative
CATH (35)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wv8A00 | 3.30.2390.10 | Alpha Beta › 2-Layer Sandwich › TTHA1013/TTHA0281-like › TTHA1013-like | 0.79 | 64.0 | 5.42e-01 | 100.0% | 53.5% |
| 2l2mA00 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.76 | 62.0 | 5.28e-01 | 100.0% | 61.4% |
| 4akrA01 | 3.30.1140.60 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › F-actin capping protein, alpha subunit | 0.74 | 51.0 | 3.73e-01 | 73.7% | 26.4% |
| 6g1nD01 | 3.30.160.250 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.73 | 59.0 | 4.75e-01 | 100.0% | 44.6% |
| 6y48D01 | 3.50.50.60 | Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain | 0.71 | 50.0 | 2.97e-01 | 86.8% | 9.7% |
| 3kk7A03 | 3.30.160.840 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.70 | 59.0 | 5.01e-01 | 94.7% | 64.5% |
| 2e9hA02 | 2.20.25.350 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.70 | 48.0 | 4.68e-01 | 76.3% | 63.6% |
| 2bn8A00 | 3.30.730.20 | Alpha Beta › 2-Layer Sandwich › GCC-box Binding Domain › Cell division activator CedA | 0.70 | 59.0 | 4.99e-01 | 100.0% | 56.7% |
| 3htxA01 | 3.30.160.20 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › | 0.68 | 56.0 | 4.65e-01 | 100.0% | 72.4% |
| 4kcaA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.68 | 56.0 | 3.23e-01 | 97.4% | 95.7% |
| 1wiiA01 | 2.20.25.190 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.65 | 50.0 | 4.57e-01 | 100.0% | 69.4% |
| 3igmA00 | 1.20.5.2050 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.64 | 43.0 | 3.88e-01 | 71.1% | 50.0% |
| 3kenA00 | 3.40.850.10 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › Kinesin motor domain | 0.63 | 48.0 | 2.88e-01 | 89.5% | 88.9% |
| 3fehA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.63 | 47.0 | 3.40e-01 | 86.8% | 47.6% |
| 1z1bA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.62 | 48.0 | 4.47e-01 | 100.0% | 82.5% |
| 1pzxA03 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.62 | 50.0 | 3.65e-01 | 100.0% | 39.3% |
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.60 | 46.0 | 3.93e-01 | 100.0% | 75.9% |
| 4hdoA03 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.60 | 46.0 | 3.64e-01 | 92.1% | 56.5% |
| 3k8rA01 | 3.30.2020.40 | Alpha Beta › 2-Layer Sandwich › NE0471 N-terminal domain-like › Uncharacterised protein PF10387, DUF2442 | 0.60 | 48.0 | 4.14e-01 | 97.4% | 94.1% |
| 3g1jA00 | 2.30.30.350 | Mainly Beta › Roll › SH3 type barrels. › mobile metagenome of vibrio cholerae. Integron cassette protein vch_cass4. | 0.60 | 45.0 | 3.68e-01 | 94.7% | 48.9% |
| 1twfI01 | 2.20.25.10 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › | 0.60 | 43.0 | 4.12e-01 | 84.2% | 63.0% |
| 5eriA00 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 37.0 | 2.49e-01 | 100.0% | 15.0% |
| 7dvrA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 37.0 | 2.53e-01 | 100.0% | 16.3% |
| 3ak5D02 | 2.160.20.20 | Mainly Beta › 3 Solenoid › Pectate Lyase C-like › | 0.58 | 46.0 | 2.56e-01 | 100.0% | 5.8% |
| 2z0qA02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.56 | 45.0 | 3.18e-01 | 100.0% | 28.1% |
| 1fx2A00 | 3.30.70.1230 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nucleotide cyclase, GGDEF domain | 0.55 | 42.0 | 2.66e-01 | 89.5% | 35.7% |
| 4m7xA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 40.0 | 3.41e-01 | 100.0% | 42.9% |
| 4mtnA01 | 3.30.1480.10 | Alpha Beta › 2-Layer Sandwich › N Utilization Substance Protein A; Chain:P; domain 4 › NusA, N-terminal domain | 0.54 | 40.0 | 3.08e-01 | 84.2% | 95.8% |
| 1tolA01 | 2.30.27.10 | Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain | 0.53 | 41.0 | 3.41e-01 | 92.1% | 47.6% |
| 1y0nA00 | 1.10.10.610 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › YehU-like | 0.52 | 40.0 | 3.45e-01 | 86.8% | 88.7% |
| 7uqyB01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.52 | 37.0 | 2.48e-01 | 89.5% | 80.4% |
| 3ol0B00 | 6.20.90.30 | Special › Other non-globular › SH3 type barrels. › | 0.52 | 36.0 | 3.61e-01 | 92.1% | 73.2% |
| 5nr1A01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.52 | 38.0 | 3.05e-01 | 97.4% | 72.6% |
| 1vq0A02 | 3.90.1280.10 | Alpha Beta › Alpha-Beta Complex › CBS domain Like › HSP33 redox switch-like | 0.52 | 36.0 | 3.35e-01 | 76.3% | 68.4% |
| 1p4xA01 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.51 | 33.0 | 2.39e-01 | 100.0% | 18.1% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4649870 | 4100.1.1.4 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › UPF0150 | 0.82 | 70.0 | 5.96e-01 | 100.0% | 58.5% |
| 4945596 | 4325.1.1.0 ↗ | mixed a+b and a/b › YegP-like › YegP-like › YegP-like | 0.82 | 69.0 | 6.63e-01 | 100.0% | 84.4% |
| 4119222 | 375.1.1.135 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Lar_restr_allev | 0.81 | 62.0 | 5.73e-01 | 92.1% | 66.0% |
| 3239607 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.80 | 54.0 | 5.55e-01 | 94.7% | 77.1% |
| 3592215 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.78 | 53.0 | 4.83e-01 | 97.4% | 52.8% |
| 4929701 | 4100.1.1.0 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like | 0.77 | 62.0 | 5.47e-01 | 100.0% | 60.0% |
| 4992542 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.77 | 63.0 | 5.73e-01 | 100.0% | 72.7% |
| 3477576 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.76 | 53.0 | 5.06e-01 | 97.4% | 62.2% |
| 4966362 | 4100.1.1.3 ↗ | a+b duplicates or obligate multimers › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › TTHA1013/TTHA0281-like › HicB_lk_antitox | 0.76 | 62.0 | 5.25e-01 | 100.0% | 57.1% |
| 3416458 | 386.1.1.259 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29169 | 0.76 | 55.0 | 5.28e-01 | 100.0% | 68.9% |
| 3484229 | 4050.1.1.0 ↗ | few secondary structure elements › beta-barrel domain in Capz › beta-barrel domain in Capz › beta-barrel domain in Capz | 0.75 | 51.0 | 4.68e-01 | 71.1% | 54.0% |
| 3612883 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.75 | 51.0 | 4.94e-01 | 97.4% | 62.2% |
| 3661622 | 64.1.1.1 ↗ | beta meanders › WW domain-like › WW domain › WW domain › WW | 0.73 | 53.0 | 5.26e-01 | 100.0% | 75.0% |
| 3414499 | 377.1.1.0 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like | 0.73 | 48.0 | 5.16e-01 | 71.1% | 86.7% |
| 3678841 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.72 | 60.0 | 4.73e-01 | 100.0% | 52.9% |
| 4026211 | 252.2.1.1 ↗ | a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 | 0.72 | 60.0 | 5.55e-01 | 100.0% | 94.0% |
| 3510389 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.71 | 59.0 | 4.61e-01 | 100.0% | 46.1% |
| 4887647 | 4050.1.1.2 ↗ | few secondary structure elements › beta-barrel domain in Capz › beta-barrel domain in Capz › beta-barrel domain in Capz › F-actin_cap_A | 0.70 | 47.0 | 4.37e-01 | 71.1% | 52.9% |
| 3181490 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.70 | 48.0 | 2.71e-01 | 76.3% | 6.4% |
| 3299579 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.69 | 57.0 | 4.81e-01 | 100.0% | 60.0% |
| 3947081 | 4210.1.1.0 ↗ | a+b two layers › WGR domain › WGR domain › WGR domain | 0.69 | 52.0 | 4.43e-01 | 84.2% | 62.5% |
| 3482420 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.69 | 47.0 | 4.98e-01 | 73.7% | 93.1% |
| 3518950 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.69 | 58.0 | 4.45e-01 | 100.0% | 40.0% |
| 3503204 | 330.1.1.1 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm | 0.69 | 56.0 | 4.39e-01 | 100.0% | 42.1% |
| 4944397 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 56.0 | 5.26e-01 | 100.0% | 78.0% |
| 4980041 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 45.0 | 4.30e-01 | 71.1% | 57.8% |
| 3798357 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.68 | 54.0 | 4.59e-01 | 100.0% | 57.3% |
| 4989457 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.67 | 57.0 | 5.27e-01 | 100.0% | 76.0% |
| 3932430 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.67 | 53.0 | 4.63e-01 | 100.0% | 61.4% |
| 4863926 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.66 | 53.0 | 4.94e-01 | 100.0% | 79.6% |
| 5030311 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 44.0 | 4.00e-01 | 71.1% | 54.5% |
| 3415739 | 64.1.1.0 ↗ | beta meanders › WW domain-like › WW domain › WW domain | 0.63 | 47.0 | 4.88e-01 | 100.0% | 88.6% |
| 3189994 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.62 | 41.0 | 3.21e-01 | 81.6% | 28.9% |
| None | — | 0.62 | 41.0 | 2.47e-01 | 86.8% | 8.5% | |
| 3502261 | 214.1.1.10 ↗ | a+b two layers › SH2 › SH2 › SH2 › DUF7145 | 0.62 | 52.0 | 3.63e-01 | 100.0% | 28.9% |
| 3393851 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.62 | 47.0 | 3.30e-01 | 97.4% | 23.4% |
| 4028185 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.61 | 43.0 | 4.08e-01 | 78.9% | 60.0% |
| 3331569 | 375.1.1.31 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Elf1 | 0.60 | 43.0 | 4.01e-01 | 84.2% | 61.8% |
| 4056471 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.60 | 45.0 | 3.85e-01 | 100.0% | 48.8% |
| 3396514 | 386.1.1.259 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › PF29169 | 0.59 | 43.0 | 4.21e-01 | 100.0% | 73.3% |
| 5045429 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 47.0 | 3.67e-01 | 100.0% | 43.2% |
| 3500033 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.58 | 41.0 | 3.89e-01 | 84.2% | 58.0% |
| 3241191 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.58 | 43.0 | 3.28e-01 | 92.1% | 40.9% |
| 3505640 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.57 | 40.0 | 3.57e-01 | 84.2% | 48.3% |
| 3468853 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.56 | 41.0 | 4.26e-01 | 89.5% | 91.4% |
| 3524770 | 358.1.1.3 ↗ | a+b complex topology › SRCR-like › SRCR-like › SRCR-like › SRCR_2 | 0.53 | 42.0 | 3.33e-01 | 100.0% | 80.0% |
| 4959043 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.53 | 37.0 | 2.69e-01 | 71.1% | 23.1% |
| 4948768 | 708.1.2.2 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like › SelR | 0.53 | 40.0 | 3.34e-01 | 100.0% | 52.9% |
| 5058465 | 101.1.8.1 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes › Phage_integrase | 0.52 | 37.0 | 2.73e-01 | 73.7% | 26.4% |