←Back to structures
UL12
Euk-VirAnatid_alphaherpesvirus_1
UL12__YP_003084411__Anatid_alphaherpesvirus_1__104388
Identity
- Accession:
- YP_003084411 ↗
- Protein ID:
- UL12
- Kingdom:
- euk
Quality
83.0
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Mardivirus›
anatid_alphaherpesvirus_1
TaxID: 104388
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 1-129
Domain cluster:
rep: deoxyribonuclease__YP_009551847__Rhinolophus_gammaherpesvirus_1__2054179__D9-136
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01771.24 best | Viral_alk_exo | 38.0 | 1.20e-09 | 95.3% | 11.9% |
D2
medium
residues 224-324_391-401
Domain cluster:
rep: BGLF5__YP_010087479__Phascolarctid_gammaherpesvirus_1__2249313__D240-334_400-410
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01771.24 best | Viral_alk_exo | 103.7 | 1.40e-29 | 92.9% | 22.3% |
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gomA00 | 1.10.10.1270 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sbi, C3 binding domain IV | 0.68 | 25.0 | 3.49e-01 | 76.8% | 67.2% |
| 2jvgA00 | 1.10.10.1270 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Sbi, C3 binding domain IV | 0.53 | 26.0 | 3.25e-01 | 82.1% | 75.0% |
| 2nr4A02 | 1.20.58.290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. | 0.53 | 24.0 | 3.24e-01 | 75.9% | 82.8% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 182718 | 2008.1.1.2 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Viral_alk_exo | 0.87 | 82.0 | 5.28e-01 | 100.0% | 38.2% |
| 5044936 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.57 | 26.0 | 2.84e-01 | 73.2% | 51.6% |
D3
medium
residues 325-390_402-469
Domain cluster:
rep: deoxyribonuclease__YP_010087590__Cervid_alphaherpesvirus_3__2115790__D246-278_337-366_406-456
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01771.24 best | Viral_alk_exo | 73.5 | 2.00e-20 | 100.0% | 29.1% |