←Back to structures
UL32
Euk-VirAnatid_alphaherpesvirus_1
UL32__YP_003084389__Anatid_alphaherpesvirus_1__104388
Identity
- Accession:
- YP_003084389 ↗
- Protein ID:
- UL32
- Kingdom:
- euk
Quality
71.1
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Mardivirus›
anatid_alphaherpesvirus_1
TaxID: 104388
Cluster
View cluster (76 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 35-67_91-199
Domain cluster:
rep: DNA_cleavage_packaging_protein__YP_009207093__Hawaiian_green_turtle_herpesvirus__70564__D1-103_380-397
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 175.7 | 2.80e-51 | 77.5% | 20.4% |
D2
medium
residues 391-477
Domain cluster:
rep: DNA_packaging_protein_UL32__NP_851892__Macacine_alphaherpesvirus_1__10325__D323-403
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 75.0 | 9.00e-21 | 100.0% | 16.2% |
D3
medium
residues 478-566
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 134.0 | 1.20e-38 | 100.0% | 17.0% |
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4hhxA00 | 1.20.81.30 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › Type II secretion system (T2SS), domain F | 0.66 | 52.0 | 4.97e-01 | 98.9% | 73.1% |
| 3egoA02 | 1.10.1040.10 | Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 | 0.60 | 44.0 | 4.04e-01 | 78.7% | 57.9% |
| 4lixA03 | 1.10.600.10 | Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase | 0.59 | 50.0 | 3.77e-01 | 97.8% | 83.9% |
| 1vctA01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.58 | 34.0 | 3.18e-01 | 93.3% | 45.9% |
| 2kjgA00 | 1.20.120.970 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.58 | 50.0 | 4.88e-01 | 100.0% | 91.9% |
| 3ke6B01 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.58 | 49.0 | 3.69e-01 | 94.4% | 78.3% |
| 1hs7A00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.57 | 33.0 | 3.28e-01 | 92.1% | 52.6% |
| 2kj9A00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.57 | 43.0 | 3.98e-01 | 87.6% | 62.7% |
| 2wzkA03 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.56 | 41.0 | 3.83e-01 | 76.4% | 66.4% |
| 3p0uA00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.56 | 43.0 | 3.24e-01 | 82.0% | 79.7% |
| 2khmA01 | 1.10.10.1350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Spidroin domain, C-terminal domain | 0.56 | 43.0 | 4.13e-01 | 85.4% | 70.4% |
| 4h0oA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 39.0 | 2.98e-01 | 85.4% | 31.7% |
| 1wpaA01 | 6.10.140.340 | Special › Helix non-globular › Helix Hairpins › | 0.54 | 31.0 | 3.00e-01 | 91.0% | 47.5% |
| 3d7iB00 | 1.20.1290.10 | Mainly Alpha › Up-down Bundle › AhpD-like › AhpD-like | 0.54 | 38.0 | 3.73e-01 | 77.5% | 67.3% |
| 1irxA05 | 1.10.10.350 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.54 | 45.0 | 4.52e-01 | 98.9% | 98.9% |
| 4od4A02 | 1.20.120.1780 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › UbiA prenyltransferase | 0.53 | 39.0 | 3.59e-01 | 78.7% | 84.0% |
| 2juaA00 | 1.20.1480.30 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Designed four-helix bundle protein | 0.53 | 41.0 | 3.92e-01 | 83.1% | 94.1% |
| 2bnlC00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.53 | 40.0 | 3.56e-01 | 89.9% | 55.2% |
| 1sxjE03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.51 | 40.0 | 3.89e-01 | 83.1% | 80.4% |
| 5a4uF02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.51 | 37.0 | 3.41e-01 | 95.5% | 57.0% |
| 4g80T00 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.51 | 42.0 | 3.63e-01 | 89.9% | 83.5% |
| 6vudA01 | 1.10.132.20 | Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › Ribosome-recycling factor | 0.51 | 35.0 | 3.40e-01 | 74.2% | 86.2% |
| 2e6oA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.50 | 39.0 | 3.94e-01 | 100.0% | 83.9% |
| 1t72A01 | 1.20.58.220 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphate transport system protein phou homolog 2; domain 2 | 0.50 | 35.0 | 3.26e-01 | 74.2% | 78.6% |
| 2jifA01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.50 | 40.0 | 3.72e-01 | 89.9% | 67.8% |
| 7c1iA01 | 1.20.120.160 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › HPT domain | 0.50 | 41.0 | 3.99e-01 | 89.9% | 85.0% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3959831 | 5067.1.1.0 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain | 0.72 | 53.0 | 4.42e-01 | 76.4% | 83.3% |
| 4434114 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.59 | 46.0 | 3.66e-01 | 83.1% | 62.0% |
| 3641832 | 101.1.10.0 ↗ | alpha arrays › HTH › HTH › Cyclin-like | 0.59 | 42.0 | 4.13e-01 | 75.3% | 69.5% |
| 3236092 | 101.11.1.0 ↗ | alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 | 0.59 | 44.0 | 4.56e-01 | 85.4% | 88.7% |
| 3899802 | 621.1.1.8 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › GVIN1 | 0.58 | 43.0 | 4.01e-01 | 77.5% | 84.5% |
| 136703 | 3808.1.1.1 ↗ | alpha arrays › Archaeal protein SSO6904 › Archaeal protein SSO6904 › Archaeal protein SSO6904 › Ca_bind_SSO6904 | 0.58 | 50.0 | 4.88e-01 | 100.0% | 91.9% |
| 5009373 | 5060.2.1.1 ↗ | alpha bundles › V-type ATP synthase subunit C › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › Toxin coregulated pilus biosynthesis protein E cytoplasmic domain › T2SSF | 0.58 | 45.0 | 4.10e-01 | 84.3% | 85.0% |
| 3939608 | 631.1.1.1 ↗ | alpha arrays › Glycolipid transfer protein, GLTP › Glycolipid transfer protein, GLTP › Glycolipid transfer protein, GLTP › GLTP | 0.57 | 45.0 | 3.53e-01 | 88.8% | 58.2% |
| 5072863 | 2004.1.3.1 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR | 0.56 | 42.0 | 3.34e-01 | 85.4% | 38.4% |
| 3932798 | 3832.1.1.1 ↗ | alpha bundles › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › DUF758 | 0.53 | 44.0 | 3.72e-01 | 96.6% | 75.2% |
| 4534689 | 5001.1.1.0 ↗ | alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like | 0.52 | 43.0 | 3.05e-01 | 91.0% | 74.5% |
| 3477079 | 3832.1.1.1 ↗ | alpha bundles › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › Tumor necrosis factor alpha-induced protein 8-like protein 2 › DUF758 | 0.51 | 43.0 | 3.58e-01 | 97.8% | 75.7% |
| 5030255 | 7516.1.1.2 ↗ | a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glycos_transf_2 | 0.51 | 43.0 | 3.00e-01 | 94.4% | 32.9% |
| 3173736 | 5050.1.1.55 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr, MFS_1 | 0.51 | 43.0 | 2.74e-01 | 95.5% | 28.1% |
| 3247658 | 2485.1.1.49 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Thioredoxin_12 | 0.50 | 42.0 | 3.48e-01 | 97.8% | 70.6% |
D4
medium
residues 602-653
Domain cluster:
rep: DNA_packaging_protein_UL32__YP_009042094__Fruit_bat_alphaherpesvirus_1__1343901__D516-583
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01673.24 best | Herpes_env | 82.8 | 3.90e-23 | 100.0% | 9.8% |