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UL46

Euk-Vir

Anatid_alphaherpesvirus_1

UL46__YP_003084374__Anatid_alphaherpesvirus_1__104388

Identity

Accession:: YP_003084374 ↗
Protein ID:: UL46
Kingdom:: euk

Quality

61.9 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Mardivirus› anatid_alphaherpesvirus_1

TaxID: 104388

Cluster

View cluster (32 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 157-425

PDB

Domain cluster: rep: tegument_protein_VP13_14__YP_068328__Suid_alphaherpesvirus_1__10345__D439-734

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03387.19 best	Herpes_UL46	301.8	1.10e-89	99.3%	60.5%

CATH (13)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1ileA03	1.10.730.10	Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1	0.64	33.0	3.85e-01	87.7%	67.0%
3pwxA01	1.20.1330.10	Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain	0.62	38.0	4.47e-01	75.8%	87.0%
3v5uA02	1.20.1420.30	Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › NCX, central ion-binding region	0.61	40.0	4.38e-01	81.8%	79.2%
1rcwB00	1.20.910.10	Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like	0.57	39.0	4.30e-01	83.6%	84.6%
1qoyA00	1.20.1170.10	Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; ›	0.57	43.0	4.14e-01	76.2%	96.4%
1dvgA00	1.20.910.10	Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like	0.57	37.0	4.11e-01	83.6%	80.4%
1rtwB00	1.20.910.10	Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like	0.57	37.0	4.14e-01	83.6%	82.2%
3mvuA00	1.20.910.10	Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like	0.55	38.0	4.09e-01	83.6%	81.2%
1uddA00	1.20.910.10	Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like	0.55	38.0	4.13e-01	83.6%	84.7%
3fnrA01	1.10.730.10	Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1	0.54	28.0	3.73e-01	81.4%	90.3%
3c7jA02	1.20.120.530	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › GntR ligand-binding domain-like	0.54	27.0	3.48e-01	79.2%	80.8%
7nmqA01	1.20.1170.10	Mainly Alpha › Up-down Bundle › Hemolysin E; Chain: A; ›	0.54	42.0	3.86e-01	100.0%	62.0%
3no6A00	1.20.910.10	Mainly Alpha › Up-down Bundle › Heme Oxygenase; Chain A › Heme oxygenase-like	0.53	37.0	3.96e-01	83.6%	77.9%

ECOD (21)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4947568	3755.3.1.0 ↗	alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin	0.73	28.0	3.40e-01	77.3%	52.1%
4497438	140.1.1.11 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1	0.71	27.0	3.57e-01	78.1%	60.0%
None	—		0.69	34.0	3.88e-01	87.7%	60.5%
4574263	140.1.1.11 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1	0.66	26.0	3.29e-01	78.1%	55.3%
4130660	140.1.1.11 ↗	alpha bundles › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases › DALR_1	0.64	28.0	3.10e-01	80.3%	47.9%
4283760	1203.1.2.7 ↗	alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › GNVR	0.58	29.0	3.86e-01	78.8%	87.9%
4008609	1203.1.2.7 ↗	alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2 › GNVR	0.57	29.0	3.89e-01	83.6%	90.7%
3207519	5059.1.1.16 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › SLC35F	0.55	44.0	4.22e-01	83.3%	96.5%
3499735	1203.1.2.0 ↗	alpha bundles › Shroom domain 2 › Shroom domain 2 › Human SD2	0.55	30.0	3.74e-01	93.7%	84.8%
3695876	150.1.2.5 ↗	alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Heme oxygenase/Ribonucleotide reductase › TENA_THI-4	0.53	40.0	4.20e-01	83.6%	83.3%
3486439	1188.1.1.0 ↗	alpha bundles › ZIP zinc transporter › ZIP zinc transporter › ZIP zinc transporter	0.53	35.0	4.09e-01	82.2%	92.6%
5052013	5059.1.1.1 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA	0.53	42.0	4.03e-01	81.8%	98.4%
3743951	5059.1.1.3 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › TPT	0.52	41.0	3.85e-01	81.8%	89.1%
None	—		0.52	41.0	3.86e-01	82.2%	93.3%
4968317	5059.1.1.1 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA	0.51	41.0	4.00e-01	81.4%	96.9%
3896942	5059.1.1.0 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter	0.51	42.0	3.74e-01	86.2%	92.4%
3387189	5059.1.1.1 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA	0.51	40.0	3.98e-01	81.4%	98.3%
4936739	3921.1.1.1 ↗	alpha complex topology › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Rnf-Nqr	0.51	33.0	3.68e-01	92.6%	82.3%
3738231	1174.1.1.3 ↗	alpha complex topology › Potassium channel TMEM175 › Potassium channel TMEM175 › Potassium channel TMEM175 › Glucan_synthase	0.51	31.0	3.11e-01	95.2%	57.4%
5065028	5059.1.1.1 ↗	alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA	0.51	28.0	3.69e-01	91.1%	100.0%
3970769	3921.1.1.0 ↗	alpha complex topology › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D › Na(+)-translocating NADH-quinone reductase subunit D	0.50	33.0	3.68e-01	92.9%	84.4%

D2 medium residues 45-106

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03387.19 best	Herpes_UL46	41.0	1.50e-10	100.0%	13.3%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2ju5A01	3.40.30.10	Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin	0.50	34.0	2.82e-01	71.0%	97.6%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3601995	101.1.2.0 ↗	alpha arrays › HTH › HTH › winged helix domain	0.51	34.0	3.06e-01	72.6%	45.3%

D3 medium residues 107-156

PDB

Domain cluster: rep: ORF14_gene_product__YP_006272993__Equid_alphaherpesvirus_8__39637__D93-159