←Back to structures

UL86

Euk-Vir

Papio_ursinus_cytomegalovirus

UL86__YP_009137462__Papio_ursinus_cytomegalovirus__1667587

Identity

Accession:: YP_009137462 ↗
Protein ID:: UL86
Kingdom:: euk

Quality

75.7 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Papio_ursinus_cytomegalovirus

TaxID: 1667587

Cluster

View cluster (34 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 42-98_124-187

PDB

D2 medium residues 235-300_351-385

PDB

Domain cluster: rep: major_capsid_protein__NP_065524__Alcelaphine_gammaherpesvirus_1__35252__D265-300_361-395

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03122.21 best	Herpes_MCP	62.0	3.70e-17	72.3%	5.1%
PF03122.21	Herpes_MCP	27.4	1.00e-06	35.6%	2.5%

D3 medium residues 386-435_1148-1167_1296-1343

PDB

D4 medium residues 436-483_974-1009_1081-1147

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03122.21 best	Herpes_MCP	62.2	3.20e-17	45.0%	4.9%
PF03122.21	Herpes_MCP	42.0	4.20e-11	33.8%	3.5%

D5 medium residues 507-577

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03122.21 best	Herpes_MCP	78.7	3.30e-22	100.0%	5.2%

CATH (10)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6j5tB01	3.30.200.20	Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1	0.66	36.0	3.02e-01	73.2%	30.8%
3zleA03	2.10.70.70	Mainly Beta › Ribbon › Complement Module; domain 1 ›	0.65	31.0	3.97e-01	71.8%	79.5%
1z1yA01	2.90.20.10	Mainly Beta › Orthogonal Prism › Plasmodium vivax P25 fold › Plasmodium vivax P25 domain	0.59	42.0	3.21e-01	74.6%	80.6%
3bt7A02	2.40.50.1070	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) ›	0.57	39.0	3.15e-01	71.8%	98.6%
1g29102	2.40.50.140	Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins	0.57	31.0	3.62e-01	80.3%	80.0%
4aghA00	2.30.31.10	Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A	0.56	33.0	3.24e-01	74.6%	51.2%
3fehA02	2.30.29.30	Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)	0.55	34.0	2.87e-01	80.3%	35.5%
3sc7X01	2.115.10.20	Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43	0.53	37.0	2.45e-01	74.6%	75.9%
2giaB00	2.30.31.40	Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A ›	0.51	38.0	3.13e-01	83.1%	78.8%
6tmfI00	1.10.455.10	Mainly Alpha › Orthogonal Bundle › Ribosomal Protein S7 › Ribosomal protein S7/S5	0.51	36.0	2.62e-01	76.1%	43.9%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3386077	2.4.1.0 ↗	beta barrels › OB-fold › MOP-like › MOP-like	0.61	33.0	3.94e-01	80.3%	82.2%
3995931	207.1.1.0 ↗	beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats	0.54	40.0	2.55e-01	81.7%	37.4%
3257822	4015.1.1.1 ↗	alpha complex topology › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › alpha-helical domain in sec1/munc18-like (SM) proteins › Sec1	0.53	37.0	2.48e-01	73.2%	97.9%

D6 medium residues 719-769_795-803_862-973

PDB

Domain cluster: rep: major_capsid_protein__YP_009051992__Elephant_endotheliotropic_herpesvirus_5__768738__D704-805_870-1011

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03122.21 best	Herpes_MCP	118.0	4.50e-34	67.4%	8.6%

D7 medium residues 1060-1079_1168-1295

PDB

Domain cluster: rep: major_capsid_protein__NP_065524__Alcelaphine_gammaherpesvirus_1__35252__D1180-1286_1299-1321

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03122.21 best	Herpes_MCP	201.3	3.30e-59	86.5%	9.4%