UL8

Euk-Vir

Anatid_alphaherpesvirus_1

UL8__YP_003084415__Anatid_alphaherpesvirus_1__104388

Identity

76.8 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Mardivirus› anatid_alphaherpesvirus_1

TaxID: 104388

View cluster (61 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 626-722_740-755

PDB

Domain cluster: rep: helicase-primase_subunit__YP_009342398__Spheniscid_alphaherpesvirus_1__2560777__D627-772

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4hs5A00	3.30.920.10	Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY	0.51	26.0	2.75e-01	91.2%	53.3%

D2 medium residues 16-160

PDB

Domain cluster: rep: helicase-primase_subunit__YP_068368__Suid_alphaherpesvirus_1__10345__D1-121

D3 medium residues 161-347

PDB

Domain cluster: rep: helicase-primase_subunit__YP_009046502__Falconid_herpesvirus_1__1510155__D156-245_261-383

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03324.21 best	Herpes_HEPA	96.2	1.70e-27	51.3%	96.7%

D4 medium residues 413-441_497-600

PDB

Domain cluster: rep: NC_004735.1__NP_835679.1__Rm378p092__00092__D1-33_185-289

D5 medium residues 442-496

PDB

Domain cluster: representative

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4bf9A02	1.20.225.30	Mainly Alpha › Up-down Bundle › Bacteriocin As-48; Chain A › Dihydrouridine synthase, C-terminal recognition domain	0.57	43.0	4.05e-01	89.1%	65.8%
1v9vA01	1.20.1480.20	Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › MAST3 pre-PK domain-like	0.57	46.0	3.95e-01	96.4%	82.1%
4griA04	1.10.8.70	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Glutamate-tRNA synthetase, class I, anticodon-binding domain 1	0.55	36.0	3.70e-01	83.6%	71.7%