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US22_family_homolog

Euk-Vir

Murid_betaherpesvirus_1

US22_family_homolog__YP_214031__Murid_betaherpesvirus_1__10366

Identity

Accession:
YP_214031 ↗
Protein ID:
US22_family_homolog
Kingdom:
euk

Quality

74.5 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Muromegalovirus› Murid_betaherpesvirus_1

TaxID: 10366

Cluster

View cluster (80 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 209-322
PDB
Domain cluster: rep: US22_family_homolog__YP_214055__Murid_betaherpesvirus_1__10366__D433-537
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2fhdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 34.0 4.41e-01 75.4% 93.5%
5kiqA02 3.10.20.890 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.60 34.0 4.04e-01 92.1% 86.1%
3udcA02 2.30.30.60 Mainly Beta › Roll › SH3 type barrels. › 0.58 27.0 3.69e-01 91.2% 96.0%
2vxtI00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.54 36.0 3.33e-01 70.2% 59.0%
3k8uA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.53 37.0 3.60e-01 97.4% 63.4%
7ob9B01 3.90.1110.10 Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 0.52 38.0 3.23e-01 76.3% 84.4%
5cxbA02 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 47.0 3.25e-01 99.1% 81.6%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 41.0 3.89e-01 86.0% 79.6%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5035934 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.61 34.0 4.13e-01 86.8% 92.3%
3736837 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.57 29.0 3.08e-01 85.1% 53.3%
3271500 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 45.0 3.13e-01 86.0% 68.5%
3407414 5.1.4.269 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, HELP, Beta-prop_EML 0.56 47.0 3.44e-01 92.1% 100.0%
3280417 241.1.1.16 ↗ a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › PF28092 0.56 46.0 3.90e-01 90.4% 81.5%
3316985 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.56 43.0 2.96e-01 82.5% 55.3%
3711004 77.3.1.1 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain › Tcp10_C 0.55 31.0 3.01e-01 78.9% 48.0%
3904209 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.54 48.0 3.53e-01 99.1% 90.2%
3743269 5.1.4.561 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, CRT10 0.53 48.0 3.27e-01 100.0% 92.8%
3612980 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 47.0 3.24e-01 98.2% 71.0%
3327575 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.53 30.0 3.24e-01 71.9% 64.0%
3669022 330.1.1.1 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › dsrm 0.53 30.0 3.30e-01 71.9% 67.4%
D2 medium residues 1-85_135-208_323-364
PDB
Domain cluster: rep: protein_U95__YP_073826__Human_betaherpesvirus_7__10372__D619-769