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US7
Euk-VirAnatid_alphaherpesvirus_1
US7__YP_003084435__Anatid_alphaherpesvirus_1__104388
Identity
- Accession:
- YP_003084435 ↗
- Protein ID:
- US7
- Kingdom:
- euk
Quality
60.6
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Mardivirus›
anatid_alphaherpesvirus_1
TaxID: 104388
Cluster
View cluster (2 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 59-175_195-220_235-249
Domain cluster:
rep: US6__YP_003084434__Anatid_alphaherpesvirus_1__104388__D49-60_94-271
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01688.24 best | Herpes_gI | 68.2 | 1.10e-18 | 66.5% | 65.2% |
CATH (6)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6lsaC01 | 2.70.230.10 | Mainly Beta › Distorted Sandwich › Glycoprotein D; Chain: A; › | 0.71 | 64.0 | 5.80e-01 | 100.0% | 72.6% |
| 1xt5A00 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.69 | 49.0 | 5.25e-01 | 71.5% | 96.3% |
| 1jmaA00 | 2.70.230.10 | Mainly Beta › Distorted Sandwich › Glycoprotein D; Chain: A; › | 0.69 | 62.0 | 5.21e-01 | 100.0% | 58.3% |
| 1f97A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 36.0 | 4.40e-01 | 70.3% | 98.1% |
| 1wgoA01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.56 | 33.0 | 4.15e-01 | 70.3% | 94.9% |
| 1l0qA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 29.0 | 3.74e-01 | 70.9% | 96.7% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3897039 | 11.1.1.3 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ig | 0.77 | 48.0 | 5.34e-01 | 70.3% | 77.6% |
| 4604105 | 11.1.1.125 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CD4-extracel | 0.73 | 51.0 | 5.55e-01 | 72.2% | 97.8% |
| 2630585 | 11.1.1.26 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Herpes_glycop_D | 0.71 | 64.0 | 5.50e-01 | 100.0% | 62.2% |
| 4085770 | 11.1.1.1293 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set, CD4-extracel | 0.71 | 51.0 | 4.54e-01 | 73.4% | 60.9% |
| 292894 | 11.1.1.26 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Herpes_glycop_D | 0.70 | 63.0 | 5.14e-01 | 100.0% | 55.1% |
| 291005 | 11.1.1.26 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Herpes_glycop_D | 0.69 | 63.0 | 5.13e-01 | 100.0% | 55.1% |
| 3767495 | 11.1.1.99 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set | 0.63 | 45.0 | 4.75e-01 | 71.5% | 83.6% |
| 3476848 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 32.0 | 3.98e-01 | 70.3% | 85.0% |
| 3622620 | 11.1.1.959 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ILCR1_N | 0.57 | 40.0 | 3.95e-01 | 71.5% | 74.7% |
| 4649101 | 11.1.1.456 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › YtkA | 0.56 | 34.0 | 4.22e-01 | 70.9% | 96.0% |
| 4317024 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.56 | 39.0 | 3.36e-01 | 70.3% | 51.3% |
| 3882033 | 11.1.1.560 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PKAT_KLD | 0.53 | 36.0 | 3.92e-01 | 70.3% | 80.7% |
| 3852952 | 330.1.1.5 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › DND1_DSRM | 0.53 | 24.0 | 3.19e-01 | 89.9% | 78.8% |
| 3231279 | 11.1.1.959 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › ILCR1_N | 0.52 | 36.0 | 3.55e-01 | 70.9% | 72.9% |
| 4615493 | 11.1.1.805 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_PDGFR_d4 | 0.51 | 30.0 | 3.77e-01 | 70.3% | 97.9% |
| 3689305 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 35.0 | 3.89e-01 | 70.3% | 97.6% |
| 5067790 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 35.0 | 4.02e-01 | 70.3% | 98.3% |