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Uracil-DNA_glycosylase

Euk-Vir

Pandoravirus_salinus

Uracil-DNA_glycosylase__YP_008438547__Pandoravirus_salinus__1349410

Identity

Accession:
YP_008438547 ↗
Protein ID:
Uracil-DNA_glycosylase
Kingdom:
euk

Quality

79.0 mean pLDDT

Cluster

View cluster (6 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 57-147_210-252
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2booA00 3.40.470.10 Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain 0.81 75.0 6.06e-01 96.3% 72.6%
6lydA01 3.40.470.10 Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain 0.78 73.0 5.77e-01 97.0% 70.4%
2c53A00 3.40.470.10 Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain 0.78 74.0 6.02e-01 99.3% 75.4%
1iq0A03 1.10.730.10 Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 0.52 37.0 3.95e-01 77.6% 86.2%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3837322 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.83 77.0 5.96e-01 95.5% 65.8%
3171107 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.82 79.0 6.00e-01 100.0% 66.7%
3592251 7569.1.1.0 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like 0.82 75.0 5.98e-01 94.8% 74.0%
2100092 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.79 74.0 5.60e-01 97.0% 63.4%
4168074 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.77 72.0 5.76e-01 97.0% 69.2%
4149039 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.77 70.0 5.64e-01 94.8% 73.5%
4621405 7569.1.1.1 ↗ a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG 0.75 70.0 5.50e-01 96.3% 77.0%
4982048 632.11.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like 0.58 30.0 3.70e-01 88.8% 80.0%
D2 medium residues 148-209_253-314
PDB
Domain cluster: rep: MK016493.1__AYQ99350.1__PBI_CANTARE_130__00130__D75-228