←Back to structures
Uracil_DNA_glycosylase
Euk-VirDeerpox_virus_W-848-83
Uracil_DNA_glycosylase__YP_227466__Deerpox_virus_W-848-83__305674
Identity
- Accession:
- YP_227466 ↗
- Protein ID:
- Uracil_DNA_glycosylase
- Kingdom:
- euk
Quality
96.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Pokkesviricetes›
Chitovirales›
Poxviridae›
Cervidpoxvirus›
Deerpox_virus_W-848-83
TaxID: 305674
Cluster
View cluster (62 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 58-217
Domain cluster:
rep: IMGVR_UViG_3300001073_000010-3300001073-C687J13245_10003112__D2-114
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03167.26 best | UDG | 27.6 | 4.00e-06 | 91.9% | 86.4% |
D2
medium
residues 1-57
Domain cluster:
representative
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3nt7A00 | 3.40.470.10 | Alpha Beta › 3-Layer(aba) Sandwich › Uracil-DNA Glycosylase, subunit E › Uracil-DNA glycosylase-like domain | 1.00 | 96.0 | 6.15e-01 | 100.0% | 26.3% |
| 2xadA00 | 3.40.50.10320 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › LmbE-like | 0.51 | 38.0 | 2.57e-01 | 86.0% | 25.9% |
| 1e29A00 | 1.10.760.10 | Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain | 0.50 | 39.0 | 3.10e-01 | 91.2% | 47.4% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 985197 | 7569.1.1.1 ↗ | a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › UDG | 0.99 | 96.0 | 6.19e-01 | 100.0% | 27.7% |
| 324235 | 7569.1.1.0 ↗ | a/b three-layered sandwiches › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like › Uracil-DNA glycosylase-like | 0.99 | 93.0 | 5.93e-01 | 100.0% | 25.0% |