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V01127.1__CAA24349.1__X__00023

Bact-Vir

V01127.1__CAA24349.1__X__00023

Identity

Accession:
V01127 ↗
Kingdom:
phage

Quality

94.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 13-114
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21268.4 best Helic-prim_T7_N 113.5 5.90e-33 57.8% 100.0%
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5fgoA00 3.10.450.700 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 32.0 3.98e-01 79.4% 85.5%
3dtdD00 2.60.40.1880 Mainly Beta › Sandwich › Immunoglobulin-like › Invasion associated locus B (IalB) protein 0.52 42.0 3.77e-01 87.3% 91.0%
1pcfA00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.52 30.0 3.72e-01 87.3% 90.9%
4arnA00 3.80.10.10 Alpha Beta › Alpha-Beta Horseshoe › Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) › Ribonuclease Inhibitor 0.52 39.0 2.86e-01 80.4% 34.3%
3k44B00 3.30.2450.30 Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › 0.51 41.0 3.70e-01 87.3% 93.6%
1rvjH02 3.90.50.10 Alpha Beta › Alpha-Beta Complex › Photosynthetic Reaction Center; Chain H, domain 2 › Photosynthetic Reaction Center, subunit H, domain 2 0.51 35.0 3.21e-01 100.0% 54.5%
4awyB00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.51 43.0 3.29e-01 98.0% 91.5%
1ms9A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.50 43.0 3.01e-01 98.0% 87.5%
1v0fA02 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.50 40.0 2.82e-01 88.2% 95.8%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3917609 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 44.0 3.34e-01 90.2% 92.1%
3574742 4.1.1.47 beta barrels › SH3 › SH3 › SH3 › Gemin6 0.54 36.0 3.84e-01 97.1% 77.8%
3364063 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.52 42.0 3.81e-01 88.2% 90.0%
3890928 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.51 41.0 3.42e-01 87.3% 87.8%
3716765 5.1.5.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.51 42.0 2.69e-01 94.1% 69.7%
3866695 295.1.1.3 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › PurA 0.51 40.0 3.55e-01 87.3% 92.9%
4959370 71.1.1.0 beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB 0.50 43.0 3.67e-01 95.1% 90.5%