V21

Euk-Vir

Sputnik_virophage

V21__YP_002122382__Sputnik_virophage__543939

Identity

55.1 mean pLDDT

Bamfordvirae› Preplasmiviricota› Virophaviricetes› Mividavirales› Sputniviroviridae› Sputnikvirus› Sputnik_virophage

TaxID: 543939

View cluster (2 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 97-244

PDB

Domain cluster: representative

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4kc3B02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.59	28.0	3.43e-01	97.3%	68.4%
5n1tA03	3.90.760.10	Alpha Beta › Alpha-Beta Complex › Flavocytochrome C Sulfide Dehydrogenase; Chain A Domain 3 › Flavocytochrome c sulphide dehydrogenase, flavin-binding domain	0.59	23.0	3.11e-01	98.6%	67.6%
3hl6A02	1.20.58.700	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 ›	0.57	34.0	3.80e-01	83.1%	74.8%
1olzA03	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.56	28.0	3.44e-01	95.3%	76.4%
4ak1A04	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.55	26.0	3.22e-01	95.9%	69.2%
4mypA00	2.60.40.1850	Mainly Beta › Sandwich › Immunoglobulin-like ›	0.54	28.0	3.06e-01	94.6%	57.9%
1tdqA02	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.52	25.0	3.06e-01	93.9%	71.1%

ECOD (6)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2528133	316.1.1.35 ↗	a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › L544_NTransf	0.80	63.0	5.55e-01	100.0%	58.0%
3291380	11.1.4.0 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like	0.55	32.0	3.14e-01	99.3%	50.9%
3918724	11.1.1.850 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF28354	0.54	28.0	3.01e-01	96.6%	56.0%
3289401	274.1.1.0 ↗	a+b two layers › Pili subunits › Pili subunits › Pili subunits	0.53	28.0	2.98e-01	96.6%	56.2%
4285085	11.1.1.99 ↗	beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set	0.52	30.0	3.32e-01	96.6%	69.2%
3838338	1.1.5.0 ↗	beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel	0.52	28.0	3.53e-01	91.9%	89.4%

D2 medium residues 245-295

PDB

D3 medium residues 296-408

PDB