←Back to structures
V2
Euk-VirSweet_potato_golden_vein_associated_virus
V2__YP_004346956__Sweet_potato_golden_vein_associated_virus__688540
Identity
- Accession:
- YP_004346956 ↗
- Protein ID:
- V2
- Kingdom:
- euk
Quality
72.5
mean pLDDT
Taxonomy
Shotokuvirae›
Cressdnaviricota›
Repensiviricetes›
Geplafuvirales›
Geminiviridae›
Begomovirus›
Sweet_potato_golden_vein_associated_virus
TaxID: 688540
Cluster
View cluster (245 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 19-132
Domain cluster:
rep: V2__YP_717914__Pedilanthus_leaf_curl_virus__619631__D5-98
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01524.23 best | Gemini_V2 | 104.1 | 5.20e-30 | 70.2% | 98.7% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3736826 | 109.3.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat | 0.51 | 35.0 | 3.33e-01 | 70.2% | 93.8% |
| 2641049 | 3403.1.1.9 ↗ | alpha bundles › Pre-mRNA-splicing factor PRP9 › Pre-mRNA-splicing factor PRP9 › Pre-mRNA-splicing factor PRP9 › SF3A3 | 0.50 | 41.0 | 3.31e-01 | 89.5% | 64.6% |